KEGG   Oxyura jamaicensis (ruddy duck): 118167444
Entry
118167444         CDS       T11549                                 
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
  KO
K08268  hypoxia-inducible factor 1 alpha
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja04137  Mitophagy - animal
oja04140  Autophagy - animal
oja04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:oja00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    118167444 (HIF1A)
   04137 Mitophagy - animal
    118167444 (HIF1A)
   04148 Efferocytosis
    118167444 (HIF1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oja03000]
    118167444 (HIF1A)
Transcription factors [BR:oja03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    118167444 (HIF1A)
SSDB
Other DBs
NCBI-GeneID: 118167444
NCBI-ProteinID: XP_035182698
LinkDB
Position
5:complement(join(48190999..48191150,48191300..48191426,48194172..48194280,48195135..48195529,48195770..48195892,48196429..48196709,48196896..48197116,48197926..48198073,48198218..48198324,48199658..48199860,48200926..48201038,48203915..48203999,48204100..48204245,48204999..48205189,48219027..48219061))
AA seq 811 aa
MDSPGGVSDKKRISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIM
RLTISYLRMRKLLDAGELETEAKMEKELNCFYLKALDGFVMVLSEDGDMIYMSENVNKCM
GLTQFELTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGR
TVNIKSATWKVLHCTGHIRVYDTCSNQTHCGYKKPPMTCLVLICEPIPHPSNIEVPLDSK
TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQV
TTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQKDLIFSLGQTECM
LKPVESPDMKMTKIFSKDDLDDTNNLFEKLKQEPDALTVLAPAAGDTIISLDFSSNESDE
QQCDEVPLYNDVMLPSSSEKLQNINMAMSPLPASETTKPLRSNADPALNREVVSKLEPNT
ETLELSFTMPQVQEQPTSPSDASTSQSSPEPSSPNDYCFDVDNDMANEFKLELVEKLFAI
DTEAKNPFSTQETDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSSSQSAATITIFQQT
QTPSTTADEIKPVAERVDDVKTLIVPSSPVHIINDTSSAPASPYSGNRSRTASPIRTGKG
TLDQTEKPCPGTPSLLTVTLNKRSTAMDEELNPKMLALHNAQRKRKMEHDGSLFQAVGIG
SLFQQTGDRGGNASLAWKRVKACKTTGHNGVEQKTIILLSTDIASKLLGQSMDESGLPQL
TSYDCEVNAPIQGNRNLLQGEELLRALDQVN
NT seq 2436 nt   +upstreamnt  +downstreamnt
atggacagccccggcggcgtcagcgacaagaaaaggattagttctgaacgcaggaaagaa
aaatcgagagacgcagctcgatgccgaagaagcaaagaatcagaagtattctatgaactt
gctcatcagctgcctcttccacacacggtgagcgcccaccttgacaaggcctccatcatg
aggctgaccatcagctacttgcgaatgaggaagctgctggatgctggtgagctggagaca
gaagccaaaatggagaaggaactgaactgtttctacttgaaagctcttgatggatttgtc
atggttctctctgaagatggggacatgatttacatgtctgaaaatgtgaacaagtgtatg
ggactcactcagtttgagttgacggggcacagtgtatttgatttcactcatccgtgtgac
catgaagagctgagagaaatgcttacgcacagaaatggtcctgtgaaaaagggcaaagaa
caaaacacggagcgcagcttttttctcagaatgaagtgtacactgactagcaggggaaga
acagtgaatataaagtctgctacgtggaaggtactgcactgcactgggcacatccgtgta
tacgacacatgcagtaatcaaactcactgtggctacaagaagcctcccatgacgtgcttg
gtgttgatatgtgaacctattcctcacccatccaacatcgaggtcccactggacagtaaa
acgttcctcagtcgtcacagtctcgatatgaaattttcctattgtgatgaaagaattaca
gagctgatgggatacgagccagaggaactcctgggtcgctccatctatgagtactaccat
gcgctggattctgatcatctgaccaaaacacaccatgatatgttcacgaaagggcaggtg
acaacaggacagtacagaatgcttgctaaacaaggtggctatgtctgggttgaaactcaa
gcaactgttatatacaacactaagaattctcagccgcagtgcatagtgtgtgtaaactat
gtgttgagtggaattgttcagaaggacttgattttttcccttggacaaactgagtgtatg
ctgaaaccggtggagtctccagatatgaaaatgaccaaaatattcagcaaagatgacctg
gatgataccaacaacctttttgaaaaacttaaacaggaaccagatgctttaactgtgctg
gctccagctgctggagacacaattatctctctagatttcagcagtaatgagtctgatgaa
caacaatgtgatgaagttcctttgtataacgatgtaatgctcccctcatccagtgagaaa
ttgcagaatataaatatggcaatgtccccactacctgcctctgaaactacaaagccactt
cgtagcaatgctgatcctgcactcaatagagaagttgtatcaaagctggagccaaacaca
gagacactcgaactttcttttaccatgcctcaggtgcaagagcagccaaccagcccttct
gatgcaagtaccagccaaagttcacctgagcccagtagtcccaatgactattgctttgat
gtggataatgatatggctaatgaattcaaactggaattagtggagaaactctttgcgata
gatacagaagcaaaaaatccattctctactcaggaaactgatttagacttggagatgttg
gctccttacatcccgatggatgatgacttccagctacgctcctttgatcagctctctcca
ctggaaagcagttcttccagctcccaaagcgcagccactattaccatatttcagcagact
cagacgccatcgactactgctgatgaaataaaaccggtggcagaacgtgtggatgatgtg
aagacgctaattgttccttcatctcctgtccacataatcaatgacacgagtagtgcccca
gcgtcaccttacagtgggaacaggagtcgaactgcatctccaatcagaacaggaaaagga
acattggatcagacagaaaaaccttgtccaggaacacccagcttgctaacagtcactctg
aataaaagatctactgcaatggatgaagaactaaatccaaagatgctagctttgcataat
gctcagagaaaacgaaaaatggaacatgatggttcactttttcaggcagttggaattggg
tctttattccagcagacaggtgaccgtggaggaaatgcatcgcttgcttggaaacgtgta
aaggcatgcaaaacaactggtcataatggagtggagcaaaagacaatcattctactatca
actgacatagcaagtaaacttctagggcagtcgatggatgaaagtggactaccccaactc
acaagttatgattgtgaagtaaatgctcccatacaaggcaacagaaacctgctacagggg
gaagaactgctcagagctctggatcaagttaactga

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