Oxyura jamaicensis (ruddy duck): 118168637
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Entry
118168637 CDS
T11549
Symbol
SYNE3
Name
(RefSeq) nesprin-3 isoform X1
KO
K21761
nesprin-3
Organism
oja
Oxyura jamaicensis (ruddy duck)
Pathway
oja04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118168637 (SYNE3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oja03036
]
118168637 (SYNE3)
Chromosome and associated proteins [BR:
oja03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
118168637 (SYNE3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin_SYNE1_2
SYNE3
KASH
Spectrin
Spectrin_SYNE1
TM-like_Thioredoxin-like_C
Motif
Other DBs
NCBI-GeneID:
118168637
NCBI-ProteinID:
XP_035185066
LinkDB
All DBs
Position
5:complement(39959943..40025372)
Genome browser
AA seq
973 aa
AA seq
DB search
MSSLCSPESRYCYMVSSNAMTQQLQDEFDSSVENAEAWMKAIQERLRINDNTKGPRSALE
ARLRETEKICALEPEGSLKMDLILVKADAALRSISEDKKREVLSKLRHIKALWEETAIYI
THCHSRIEWVWLHWSEYLKAQDEFYAWIHNMRVTLEPDIELQLGLKEKQWQLSHAQVLLN
DVLNQSVLLERLLEEAASLFNRIGDPSVDEDVQNKMRVEYEGIREEAQNRVKLLEKITNE
HERYSANVNQFQSWLNGVTERLNCCIGEATKSSAEDKLKALKEITKAIRSGGKKWKHLEN
QCAEVIQNTSPLGAERMKDELEELKKALEKLKLLSSEEEERLLKIQQSENAYKSQARQLE
ADIQEFKKDLQKLENDLNSGEREKTEDEFVAQWRKCNATRAVLAAEESTIERLKAQLKDL
LQFSQDVQPHAESVVSAIRDYQSVRGKTSKMSTDTETQLRKLFQNPLQDFEQWKPSVQML
LESPEPLLAQIEVALAESSQFKEKLMTLQLKKDLLNNILGEEKAKAFLAEVAEASKEREI
LHKSLLQTKSKLQNLISQHKDFDAGFAPLQKKLSAIKAKLDLENEPQPNLLGKKTQLQRL
QMIQDDLAELAIQMEEVEKLVQSNTTHRHEMNQLSSDAQAVKRSLEIMIQQTEEHVQKHW
AFNDKLSDLQQWITATTEKISSYQGADGEQSTESRMADLERWLAEFPDKEIQLHLVEAHG
QLVMENSSPEETAHVQAELDQLKESWRSLKEMATGLFKRWQLNRPVADKKRKKIAFVDSR
HMSGPAFRLLDPNHKQERIEQNTSSHLKLLHDFEEWLQGENAKLSKILAATSSSTEEIKA
RHKKLEELQARVPDGQRRFEDLLHLHPVIGDSEGLEDLRYRWMLYKSQLKEYMSLPSMRS
SEEPDKFRKKRSGVCSFLHRVCWAALPLQLLLLFLLLLAFLLPLVEDTHSCTLANNFARS
FNLMLRYEGPPPT
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctttgtgctctcctgaatcacgatactgctacatggtttcttcgaatgcaatg
actcagcagctacaggatgaatttgacagtagcgtggagaatgcagaagcttggatgaag
gccatccaagagagactgaggatcaatgacaacaccaagggacctcgatctgccctggaa
gccagactaagagagacagagaaaatatgtgctctggaaccagaaggcagcttgaaaatg
gacttgattcttgtgaaggcagatgctgctcttcgtagcatcagtgaggataagaagcgt
gaagtattatctaaattgagacacattaaagccttgtgggaagagacagccatatacatc
actcactgtcacagccgcattgaatgggtctggctgcactggagtgagtacctgaaagcc
caggatgagttttacgcatggattcacaacatgagggtgaccttggagcctgacattgag
ttgcaacttggcttaaaggagaagcagtggcagctgagccacgctcaggttctgctgaat
gatgtcttaaatcagtcagtcttgctggaaaggctgctggaagaagctgcttccttgttc
aacaggataggagaccccagtgttgatgaggatgttcagaacaaaatgagggtggaatat
gaaggaatcagggaagaagctcagaacagagtgaaactgcttgaaaagataaccaacgag
catgagcggtacagcgctaacgtcaaccagtttcaatcgtggctgaatggtgtgacagaa
agattaaactgctgcattggggaagcaaccaagtcttcagcagaggacaagctaaaggca
ctgaaggaaattaccaaagccatcaggagtggtgggaagaaatggaagcaccttgaaaat
caatgtgcagaggtgattcagaatacctccccattgggagctgagagaatgaaggatgaa
ctcgaagagctgaaaaaagccttggagaagttgaaactgctgagcagtgaggaggaggaa
agattgctcaagatccaacagtcagaaaatgcctacaagtcccaagccagacaattagaa
gcagatatccaggaattcaaaaaagacctacagaaactagaaaatgacctgaactctgga
gaaagggaaaagactgaagatgagtttgtagctcagtggagaaaatgcaatgcaacaaga
gccgttctggctgcagaagagtcgacgattgagaggctaaaggctcagcttaaggatctg
ctacagttttcccaagatgtgcagccacacgctgagagtgttgtctctgccatacgggac
tatcaaagtgttagagggaagacatctaaaatgagtaccgacacagaaactcaactgagg
aaacttttccaaaatcccctgcaagattttgaacaatggaagccatctgtccagatgctc
ctggagtctccagagccgttgctggcacagattgaggttgctctagctgaaagctcccag
ttcaaagaaaagttgatgacattacagttgaagaaagatttgctaaacaatatccttggt
gaggaaaaagctaaagctttcctggcagaagtagctgaagcttcaaaggagagagaaata
ctacacaaaagtctgttacaaaccaaaagcaaactccagaatttgatatcacaacataag
gactttgatgctggttttgcacctttgcagaagaaattatctgccatcaaagccaaatta
gatctggaaaatgaaccacagccaaacctcttgggtaaaaagacacagctccagagactc
cagatgatccaagatgacttggcagagcttgcaattcaaatggaagaggtagagaagctg
gttcagtcaaacacgacacataggcatgaaatgaatcaactttcatctgacgctcaggcc
gtgaagagatcactggagataatgatacagcagactgaagagcatgtacagaagcactgg
gcatttaatgacaaactctctgacctccagcaatggatcacagcaaccacagagaagatc
agctcctaccagggtgctgatggagagcagagcactgagagcaggatggcagacctcgag
agatggctagcagagtttccagataaggagatccagctgcacctcgtagaagctcatggc
cagctggtcatggagaattcttccccagaggagaccgcccatgtccaggctgagctggat
cagctgaaggagtcttggagatcactgaaagaaatggcaactggtcttttcaaaaggtgg
cagttaaatagaccagtggctgataagaagagaaagaaaatagcatttgtggacagcaga
cacatgtctggacctgcattccgtcttttagatcccaaccataagcaggagaggatagaa
caaaatacaagtagccaccttaagctcctacatgactttgaagagtggttgcaaggagaa
aatgccaaactgtccaaaattcttgctgcgacttcatcttccacagaggaaatcaaggca
cgccataaaaaactggaggaactacaggctcgtgtgcctgatggtcagcgtcgctttgag
gaccttcttcatcttcatcctgtcattggcgactctgaaggtctggaggacctgcgttac
cgatggatgctttacaaatctcaactgaaagagtacatgagtttgccgagtatgagatct
tcagaagaaccagacaaattcaggaagaagcgctctggagtgtgctccttcctgcatcga
gtgtgctgggcagcactgccactgcaactgctcctcctgttccttctgctcctggccttc
ctcctgcccctggtagaggacacccacagctgcacgctggccaacaacttcgctcggtcc
ttcaacctgatgctgagatacgagggcccacctccaacctaa
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