Oxyura jamaicensis (ruddy duck): 118169725
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Entry
118169725 CDS
T11549
Symbol
LCMT2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
oja Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oja03016
]
118169725 (LCMT2)
Enzymes [BR:
oja01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
118169725 (LCMT2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
118169725 (LCMT2)
Transfer RNA biogenesis [BR:
oja03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
118169725 (LCMT2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Beta-prop_TYW4
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
Motif
Other DBs
NCBI-GeneID:
118169725
NCBI-ProteinID:
XP_035187137
LinkDB
All DBs
Position
1:204568267..204605089
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AA seq
683 aa
AA seq
DB search
MGRGRPGAPRDAAVQGTGGSSAISKCSAAERGYIEDRFLRLLAGRRRRRAPLVHRGYYIR
ARAVDHCVQDFLLKTQSYPRTQILSLGAGFDSLYFRLKDMGLLHHTVMYEVDFPNVACQK
ATLIKTTKELSALVGDTEGERLGVTTIFSGEDYKLLGVDLSELSKLSTALKEAGLDNEVP
TLFIAEVVLTYMENSRSDALIQWAAEHFSQACFLLYEQMHPEDPFGRVMQQHFSQLNSAL
HSLSQYPDCEAQQRRFFEKGWTECSVMDMNEFFICCTPENEQQRVQALEPFDEYEEWHLK
CSHYFVLTASKGMEPTWTPLLSSQTVPHHHGPVKMVGSINALVCEVHSETSGLRRYGHHS
ALIKPNVILTTGGFGEENGQHCRMRNFHVLIKHAGYWKAGCVKKENPDKRWDERLYHTVS
CLSSTLALVVGGRTSPNAALGMLWLKFPKTCNDLDPSDITVELVSVQPAAEPFALRWRHS
TTEVIFKGEKYLFMYGGRSAAQPVLGDWYFLHTPEISCTVIPVEGPVPEGRHSHSACSWK
GGVLIAGGLGAAEQPLGSVFFLREAEHGFQWQTVETHPPLIPRYSHTAHVHDGKLLLVGG
VWLHSFSVPGITVIDLITGLCLDYTINVEHLEWPLMLHNHSSVFLPNEKELLLIGGGGNC
FSFGTHLNPKPVSISLRNILTSH
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcgggcgcccgggcgcgccgcgcgacgccgccgtgcagggcaccggcggcagc
agcgccatcagcaagtgctcggcggcggagcggggctacatcgaagaccggttcctgcgg
ctcctggcggggcggcggcggcggcgcgccccgcttgtccaccggggttattatatccgt
gcccgtgctgtagatcactgtgttcaagactttctgctgaagacccaaagctatcctagg
acacagatcctgtctttaggtgctggctttgactccttgtacttccgtttgaaagacatg
ggtcttctgcatcacactgtgatgtatgaggtggatttcccaaatgtggcatgccagaaa
gctactctgatcaaaacaacaaaagagttgtcagcacttgtgggagatactgaaggggag
cgattaggagtcactactatcttttctggagaagattataaattactgggagtggattta
tcagagttgtctaagctgagtacagccctaaaagaagcaggactggacaatgaagtcccc
acccttttcatagcagaggtggtgctcacctatatggaaaatagcaggtcagatgccttg
attcagtgggcagcagagcatttctctcaggcatgctttctgctgtatgagcagatgcac
cctgaggacccttttggacgtgtcatgcagcagcattttagccagctgaactctgcactt
cattctttgtcacaataccctgattgtgaggctcagcagaggcgcttttttgaaaaaggc
tggactgagtgcagtgtcatggatatgaatgaatttttcatctgttgtactccagaaaat
gaacaacaaagagtgcaggctctggagccttttgatgaatatgaggaatggcatctgaaa
tgttctcattactttgtcttgactgcatcaaaggggatggaacctacctggactccattg
ttatccagtcagacagttcctcatcatcatggtcctgtcaagatggttgggagtatcaat
gcattggtgtgtgaagtgcactctgaaacttctggcttgagacgatatggccaccactct
gctcttatcaaacccaatgtaattctgaccactggaggctttggggaggagaatggacag
cactgtcgtatgagaaattttcatgtgctgattaagcatgcaggctactggaaggccgga
tgtgtgaaaaaggaaaatcctgataaaagatgggatgagcgattgtaccatactgtgtca
tgtctctcaagcaccctagccctggtggtaggaggacgaacatccccaaatgcagctttg
ggaatgctgtggctaaagttccccaaaacctgtaatgacttggatccaagtgacattaca
gtggagcttgtaagtgtgcagcctgctgctgaaccatttgctttgcgctggagacacagt
acaactgaagtaatattcaaaggtgagaagtacctctttatgtatggaggccgctctgct
gcgcagccagtgctaggagattggtatttcctgcacactccagaaatttcctgcactgtg
attcctgttgagggtccagtaccagaaggccgtcactctcacagtgcctgtagttggaaa
ggaggagtgctaattgcaggaggtctgggagcagctgagcagcccttaggttcagttttc
tttctgagggaggctgaacacggctttcagtggcagacagtagagacacaccctcctctc
atcccaaggtattcacatactgctcatgtgcatgatggaaaacttctgcttgttggcgga
gtgtggcttcactcattttctgtgccaggcatcactgtcattgacttaataactggtctc
tgcttggactacacaattaatgtggagcatttggagtggccattaatgctgcataatcat
agtagtgtttttctgccaaatgaaaaggagctgttgcttattggtggtggtgggaactgc
ttctcctttgggacacacctgaacccaaagcctgtctcaataagcctcagaaatattctg
accagccactaa
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