KEGG T11549: 118169877

Oxyura jamaicensis (ruddy duck): 118169877

Entry

118169877         CDS       T11549

Symbol

CLASP1

Name

(RefSeq) CLIP-associating protein 1 isoform X1

K16578

CLIP-associating protein 1/2

Organism

oja Oxyura jamaicensis (ruddy duck)

Brite

KEGG Orthology (KO) [BR:oja00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oja03036]
    118169877 (CLASP1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oja04812]
    118169877 (CLASP1)
Chromosome and associated proteins [BR:oja03036]
Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Microtubule-associated proteins
     118169877 (CLASP1)
Cytoskeleton proteins [BR:oja04812]
Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Cytoplasmic linker proteins (CLIPs)
     CLIP-associating proteins
      118169877 (CLASP1)

SSDB

Motif

Other DBs

NCBI-GeneID:

118169877

NCBI-ProteinID:

XP_035187519

LinkDB

Position

7:join(25567380..25567574,25589650..25589728,25589913..25590016,25590569..25590660,25590747..25590822,25593325..25593422,25595179..25595246,25626702..25626854,25627705..25627778,25628571..25628663,25629903..25630048,25630707..25630842,25631589..25631659,25632616..25632675,25633353..25633430,25635189..25635356,25636138..25636187,25637457..25637627,25639221..25639244,25646330..25646437,25647929..25647955,25649713..25649880,25655126..25655233,25659108..25659170,25663136..25663239,25665713..25665736,25666682..25666926,25670448..25670511,25671518..25671520,25671749..25671912,25672835..25672913,25673657..25673800,25685302..25685445,25686729..25686835,25691675..25691791,25695370..25695520,25696504..25696750,25697526..25697719,25699462..25699590,25710005..25710211,25712287..25712403,25714168..25714254)

AA seq 1578 aa
MEPSMEYCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKMVDGLATSWVN
SSNYKVVLLGIDILSALVSRLQDRFKAQIGTVLPSLLDRLGDSKDSVREQDQTLLLKIMD
QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQSLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSSGDKN
FDDEDSVDGNRPSSASSSTSSKAPANSRRVGMGTTRRLGSAPLGSKSSTAKEGAGAVDEE
DFIKAFEDVPTVQIYSSRDLEESINKIREILSDDKHDWEQRVSALKKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKVMATSGVVAVRLIIRHTHIPRLIPIITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTPGSLQRSRS
DVDVNAAASAKSKVTSSGASTPFSSAAALPPGSYASLDGTTTKTEGRIRTRRQSSGSATS
VTSTPADTRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSAYGGLSGGTSRVQPVP
SSAEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFP
PLASRRHSRSTSALSTADSVGQSDRFGLGQPGRMPASVNAMRVLSTSTDLEAAVADALLL
GDSRSKKKPVRRRYEPYGMYSDDDANSDASSACSERSYGSRNGGIPHYLRQTEDVAEVLN
HCASSNWSERKEGLIGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLV
DFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRF
IVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKA
AQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTSVGSPSNTLGRTPSR
HSSSRTSPLTSPTNCSHGGLSPSRFWGWSADGLSKHPPPLSQPNSIPTAPSHKTFRRSYS
PSMLDYDTENLNSDEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKDCDIVSRDGGLA
VPTSDVRGSSDIVEGGRMALDNKTSLLNTQPPRAFSGPRAREYNPYPYSDTINTYDKTAL
KEAVFDDDMDQLRDEVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDNLGVW
EEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSH
KEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVIERISKESLHQ
LLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKR
AQTTNSNSSSSSDVSTHS

NT seq 4737 nt +upstreamnt +downstreamnt
atggagcccagtatggagtactgcttagcgcaggtgctgcagaaggatgttgggaagagg
ctccaggttggccaggaactgatagattacttctcagataaacagaagtcagctgatctc
gaacacgatcagactatgctggataaaatggttgatggactggccacctcttgggtcaat
tccagcaattacaaggtggtcctcctgggcatcgacatcctctctgcgctggtgtcgcgc
ctgcaggaccgcttcaaggcccagatcggcacggtgctgccaagtttgctcgacaggctg
ggagactccaaagactcagtgagggagcaggatcagaccttgctactgaaaatcatggat
caagctgctaaccctcagtacgtgtgggataggatgctaggaggattcaaacacaagaat
ttccggacgagagaagggatctgcctctgccttatcgcaacactcaatgcatctggagct
cagagcttaacgctgagtaagatagtgccacacatctgtaacttacttggagatcccaac
agccaggttcgagatgcagcaataaacagccttgtggagatctacagacatgtcggtgaa
cgcgtaagggctgatctcagtaaaaaaggattaccccagtctcggttgaatgtaattttt
acaaaattcgacgaggtccaaaaatctggaaacatgatccagagttcaggggataaaaat
tttgatgatgaagactctgtggatgggaacagaccttcctcagctagctcctctacgtcc
tcaaaggcccctgcaaactcacgtagggttgggatggggactacccgcagacttgggtct
gcgcctctgggatccaagtcctcaacagccaaagagggagcaggtgctgtggatgaagaa
gacttcattaaggcatttgaagatgtcccaacagttcagatttattctagccgggatctt
gaggaatccataaacaaaataagagagatactatcagatgacaagcatgactgggagcaa
agagtatctgctctgaaaaagatccgctccttactcttggctggagctgcagaatatgat
aacttcttccaacacttgcgactcttggatggagcatttaaattatctgctaaagacctg
cggtctcaggtagtgcgagaggcttgtatcaccttgggacatttgtcatcagttctggga
aacaagtttgaccatggggcagaagccattatgccaacaatttttaatctaattccaaat
agtgccaaagtcatggccacttctggtgttgtagcagttagattaatcattcgacataca
cacatccctcgactaatacctatcataaccagtaattgtacctccaagtctgtcgccgtt
agaaggcgctgttttgaatttttagacctgctgctgcaggagtggcaaactcactcccta
gaaagacacatatcagtgttagctgaaactataaagaagggaattcatgatgcagactct
gaagccaggatagaggcaagaaagtgttactggggtttccacagtcacttcagccgagag
gcagagcatttgtaccacactctggagtcctcctaccagaaggccctgcagtcgcatttg
aagaactctgacagcattgtgtccttgccgcaatcggatcgctcctcctccagctcccag
gagagtctcaaccgtccactctctgccaaaagaagtcctactggaagtactacatctaga
gcatctacagtaagtacaaaatctgtgtcaacaccaggatctctgcagcggtcccgcagt
gacgttgatgtgaatgcagcagctagtgccaagtcgaaagtgacatcttctggagcatct
acccccttcagttctgctgcagccttgcccccaggctcatatgcatcactagatggtact
accactaaaactgagggtcggattcgtacaaggagacagagctctggcagtgccacaagc
gtcacctcaacgcctgctgatacccgaggccgcagccgggctaaagtggtttcccagtcc
caacgatccagatcagctaatcctgctggtgctggtagccggtctagttctccgggtaag
ctgttaggaagcgcatatggtggcttgagtggtggaacatccagagttcagccagtgcca
tcatctgcagagaagcgcagcaagatccctcggagccagggatgcagtcgagagacaagt
cccaacagaataggactagcacggagcagtcgtatcccccgacccagcatgagtcagggg
tgcagccgtgataccagccgtgagagcagtcgagatacaagccctgctcggggctttcct
ccacttgcttctcgacgtcattccaggtccactagtgctctctccactgctgattctgtt
gggcagtcagaccggtttggactcggacagccaggcaggatgcctgcttctgtgaatgcc
atgcgagtcctgagcacaagcacagatctggaggctgctgtggctgatgcactgctgtta
ggagactccaggagcaagaaaaagcccgtgagaagaagatatgaaccctatgggatgtac
tcagatgatgatgctaacagtgatgcatcaagtgcttgctccgagcgctcctatggttcc
aggaatgggggcattccgcactacctgcggcagactgaagatgtggctgaggtcctgaac
cactgtgccagctccaactggtctgaaaggaaggaggggctcataggtcttcagaactta
ctgaaaagccagcggacgctgagccgagtcgagttaaaaaggctatgtgaaatatttact
cgcatgtttgctgaccctcacagcaagagagtcttcagcatgtttctggaaaccctggtt
gatttcatcatcattcataaagatgacttgcaggattggctttttgttcttctgacacag
ttgctaaagaaaatgggagcagatttgctggggtctgtgcaggcaaaagttcaaaaagct
ctggatgttaccagggattcttttccatttgatcaacaatttaacattttgatgaggttt
attgtggatcagacccaaacaccaaacctcaaggtgaaagttgctatcctgaagtatatt
gagtccttggcaagacagatggatccaacagactttgtaaactctagtgagacaagactt
gctgtatctagaattataacttggacaacagaaccaaagagctcagatgtgagaaaggca
gcgcaaatagtcctgatttccctcttcgaactgaacacccctgagtttaccatgttactt
ggtgccttgccaaaaacattccaggacggtgctaccaagctcctgcacaaccacctcaag
aactccagtaacaccagtgtgggttctcccagcaatacccttggtcggactccttcccgg
cactccagcagcagaaccagccccttaacttcacctaccaactgttcccatggtgggctg
tctccaagtcggttctggggttggagtgcagacgggctgtcgaagcacccccctcccctt
tctcagcctaactccatccccaccgctccttcccacaagactttcaggcgctcttattct
cccagtatgctggattatgacacggagaacctaaattctgatgaaatctacagctctctt
cgtggagtcacagaagcgattgaaaaatttagtttccgtagtcaagaggatctgaatgaa
ccaatcaaacgtgatggaaagaaagactgtgacattgtgtctcgagatggtggccttgcg
gtacctactagtgatgtccgtggaagtagtgacattgtagaaggaggaaggatggcgcta
gataacaaaacctccttactgaacacccagcctccccgcgccttttcagggccacgtgct
cgagagtataacccctatccttattccgacacaattaacacttacgacaagactgccctc
aaggaagcagtgtttgatgatgacatggatcagcttcgggatgaagtacccattgaccat
tcagatttggtggctgaccttctgaaagagctctctaaccacaatgaacgggtggaggag
cgaaaaggagctctcctggaacttctaaagatcacaagggaagataaccttggagtttgg
gaggaacatttcaaaaccattctgctcctgctgctggaaacacttggagacaaagatcat
tcaataagagccctggcactgcgagtccttagagagatcttacggaatcagccagcaagg
tttaaaaactacgcggagctgaccatcatgaaaacactggaagcccataaggattcccac
aaggaggtcgtcagagctgctgaggaagctgcttccaccctggcaagctccatccaccct
gagcagtgcatcaaggtgctttgccccatcattcagactgcagattatccaatcaattta
gctgccatcaaaatgcagacaaaagttattgagaggatttccaaggaatcgttgcatcaa
ctccttcctgatatcattcctggattgttacagggttatgataacacagagagcagcgtc
cgtaaagctagtgtattttgcctagtggcaatttattcagtaattggagaagaactgaaa
cctcatctcgcacaactcacaggaagcaagatgaaactactaaacttgtacataaagagg
gcccagaccaccaacagcaacagcagttcctcttcagatgtttcaacgcacagttaa

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