KEGG   Oxyura jamaicensis (ruddy duck): 118169904
Entry
118169904         CDS       T11549                                 
Symbol
AGAP1
Name
(RefSeq) arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 isoform X1
  KO
K12491  Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:oja00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    118169904 (AGAP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oja04131]
    118169904 (AGAP1)
Membrane trafficking [BR:oja04131]
 Endosome - Golgi transport
  Arf GTPases and associated proteins
   Arf GTPase associated proteins
    118169904 (AGAP1)
SSDB
Motif
Pfam: ArfGap Ras Ank_2 Ank PH Ank_5 Ank_4 Ank_3 Roc PH_6
Other DBs
NCBI-GeneID: 118169904
NCBI-ProteinID: XP_035187599
LinkDB
Position
7:join(18465758..18466934,18501333..18501391,18509255..18509342,18510082..18510093,18525784..18525869,18527715..18527750,18528549..18528690,18532631..18532765,18560091..18560218,18569966..18570121,18574714..18574806,18613457..18613561,18626211..18626379,18643497..18643658,18661997..18662158,18697009..18697086,18705502..18705656,18707902..18707992,18714128..18714350,18750083..18750338,18750825..18751028)
AA seq 1238 aa
MYLLDSSEPPAAASPERMQRGTPQRKTVYRISVTMVKKELLGPEGAGQPGSEPPQHGRWG
CSQAPGSSSLTRAGLLLVEEEEGEEEGEEQDRVPSPCGFRNFRTLSTGQLELGRLKVPRR
AGQPFPAELTFRWPRQQTSMGPRSSPSLEDATLTPEPAATCSCEEARAATELVAASPKED
AGLQAHRLPASCWGEAVQPGEPGHSPGRQPGLLRRSFSFRHWSGAELLRARALSRVRRHS
SSGCLPAPPGPQPNEVAEAPGSPPAEPPAAEKRNTLDVGEVLSKADPLSELERWERSKSK
NRTLDNSDLQRLSERLGRDGPTGSPAAHEHRLLRFFSGIFARKDGTSTLFGSPHGRSPRS
SFSRSRAYFSSLRRATADIESSSESIDGSPHKDAFVNSQEWTLSRSVPELKVGIVGNLAS
GKSALVHRYLTGTYVQEESPEDMDAGGRFKKEIVVDGQSYLLLIRDEGGPPEAQEWNHLG
KNKGSEFAMWVDAVIFVFSLEDEVSFQTVYHYYSRMANYRNTSEIPMVLVGTQDAISSSN
PRVIDDARARKLSNDLKRCTYYETCATYGLNVERVFQDVAQKIVATRKKQQLSIGPCKSL
PNSPSHSSVCSAQVSAVHISQTSNGGGSLSDYSSSVPSTPSTSQKELRIDVPPTANTPTP
VRKQSKRRSNLFTSRKGSDPDKEKKVLESRTDSIGSGRAIPIKQGMLLKRSGKSLNKEWK
KKYVTLCDNGVLTYHPSLHDYMQNVHGKEIDLLRTTVKVPGKRPPRATSACAPISSPKTN
GLSKDMSSLHISPNSGNVTTSTSVSQMASGISLVSFNSRPDGMHQRSYSVSSADQWSEAT
VIANSGISSDTGLGDSVCSSPSISSTTSPKLDPPPSPHANRKKHRRKKSTSNFKADGISG
TAEAKRKAWKLNRVGSLRNIYSSSSTNTEEQEENFEFIIVSLTGQTWHFEATTYEERDAW
VQAIESQILASLQSCESSKNKSRMTSQNEAMALQSIRNIRGNSHCVDCEAQNPDWASLNL
GALICIECSGIHRNLGTHLSRVRSLDLDDWPIELIKVMSSIGNELANSVWEENSQGHMKP
SSESTREEKERWIRAKYEQKLFLAPLQCLELTLGQHLLRATAEEDLRTVILLLAHGTREE
VNETCGDGDGRTALHLACRKGNVVLVQLLIWYGVDVMARDAHGNTALAYARQASSQECID
VLLQYGCPDERFVLMATPNLSRKNNNRNNSSGRMPTII
NT seq 3717 nt   +upstreamnt  +downstreamnt
atgtaccttttggacagcagcgagccgccggccgccgcctcccccgagaggatgcagcgc
gggaccccccagaggaaaaccgtctaccgcatctccgtgaccatggtgaagaaggagctg
ctggggccggagggcgccgggcagcccggctccgagccgccccagcacgggcggtggggc
tgcagccaggcgcccggctcgtccagcctcaccagggccgggctgctgctggtggaggaa
gaggagggcgaagaggagggcgaggagcaggaccgagtgcccagcccctgtggcttccgc
aatttcaggaccctcagcactgggcagctggagctgggccgtctcaaggtgccgcggcga
gcggggcagcccttccccgccgagctgaccttcaggtggccacggcagcaaacctccatg
ggaccgaggagcagcccttccctggaggatgccaccctcaccccggagccagcagccacc
tgtagctgcgaggaagccagagctgcaactgagctggtggctgcttctcccaaggaggat
gctgggctccaggcccaccgcttgcctgcaagctgctggggtgaggccgtgcagccgggg
gaaccaggccacagccccgggcggcagccgggcctgctgcggcgcagcttcagcttcagg
cactggagcggcgcggagctgctgcgggcacgggcactgagccgggtgcggcggcacagc
agctcaggatgtctccccgcaccaccggggccgcagcccaatgaggtggctgaagcacca
ggctcgccacccgccgagccacccgctgctgagaagcgcaacaccctggatgtgggtgag
gtgctgagcaaggccgacccgctctccgagctggagcgctgggagcggagcaagagcaag
aaccgcacgctggataacagcgacctgcagcggctctcggagcgcctggggcgggacggc
cccactggcagccctgcggcccatgagcaccggctgctgcgcttcttcagcggcatcttc
gcccgcaaggatggcacctccaccctcttcggcagtccccatggcaggtccccacgcagc
agcttctccaggtccagggcttattttagcagtctcaggagagccaccgccgacatagag
tccagctccgagagcatcgatgggtcccctcacaaagatgcctttgtaaatagccaggaa
tggacactaagccgatctgtaccagagctgaaagtggggatcgtgggtaacctagctagt
ggcaagtctgcacttgtacaccggtatctgactggcacatatgtccaagaagaatcacct
gaagatatggatgcaggtgggagattcaagaaggagatagtagttgatggacaaagctat
ctgctgctgattagagatgaagggggccctccagaggcacaggaatggaatcacttaggg
aaaaataaaggaagcgagtttgccatgtgggtggatgctgttatatttgtcttcagtttg
gaagatgaagtcagcttccagaccgtttaccactactacagccgtatggctaactatcgt
aacactagtgaaattccaatggtactagtaggaactcaggatgctataagttccagtaac
ccacgtgtcatagatgatgccagagcaaggaagttatcaaacgatctcaagagatgcact
tactatgaaacctgtgctacatatgggctcaacgtggagagagtctttcaagatgttgct
cagaagattgtcgcaacaaggaagaaacagcaactctcgattggaccctgcaaatcccta
ccgaactctccaagtcactcatctgtgtgttctgcccaggtttctgctgtacatatcagc
cagaccagtaatggaggagggagtttaagtgattactcctcctctgtcccatcaactcca
agcaccagccagaaggagctacggattgatgttcctcccactgccaacacaccaactcct
gtccgtaaacagtccaagcgccgatccaacctcttcacgtctcggaaaggtagtgaccca
gacaaagagaagaaggtcctggaaagcagaacagatagcattggaagcggtcgtgcaatc
ccaattaaacagggtatgctgctaaagcgaagtggcaagtcattgaataaagaatggaag
aagaaatacgtgacgttgtgcgacaatggtgtgctgacctatcatcctagtttacatgac
tatatgcagaatgttcatgggaaagaaatcgacttgctgagaaccactgtgaaagttcct
ggaaagaggccaccccgagctacgtcagcttgtgcacctatttccagtcccaaaacaaat
ggcctctccaaggacatgagcagtttacacatctcgccaaattcagggaacgtgactact
agcacatctgtgtctcagatggccagtgggatcagtctagtctccttcaacagtcgtccg
gatggtatgcatcagcgctcttactcggtctccagtgcagatcagtggagtgaggcaaca
gtcattgcaaactctggcattagcagtgataccggattaggagattctgtgtgttcaagc
ccaagtatatccagtacaaccagccccaaactcgatccgcctccttcacctcatgccaac
agaaagaagcatcgcaggaagaaaagcaccagcaatttcaaagctgatggtatctcaggc
acagctgaagccaaacgcaaagcttggaaactaaaccgtgttggtagcctgcgaaatata
tacagcagcagcagcaccaacactgaagaacaagaagaaaacttcgagtttatcattgtc
tctctcactggccagacttggcactttgaagctaccacatacgaagaaagagatgcatgg
gtacaagccatagagagtcagatcttggccagtttacagtcatgcgagagcagcaagaac
aagtcccgtatgacgagtcagaatgaggccatggcccttcagtcaataaggaacatcaga
ggcaattcccactgcgtggactgtgaagcacagaaccctgactgggccagcttgaatctg
ggagccctcatatgcattgaatgctcaggtatacaccgaaaccttggtacacacctctcc
cgggtccgctctcttgacctggacgactggcctatagagcttatcaaggtgatgtcttct
atcgggaacgagttggcaaacagcgtctgggaggagaacagccaaggccatatgaaacct
tcgtcagagtccacaagggaagaaaaggagcgctggatacgtgcaaaatatgagcagaag
ctcttcctcgccccactgcaatgcctggagcttactctgggccagcatctcctgagggct
acagccgaggaagatttgcggacggtcatcctgctccttgcccacgggacacgggaggag
gtgaacgagacctgcggggacggggatgggcgcactgccctgcacttggcctgcaggaaa
ggaaacgtggtgttggtgcagctcttgatttggtatggcgttgacgtgatggcacgtgat
gcccacgggaacacggcgttggcctatgccaggcaagcctccagccaggagtgcattgat
gttctcctccagtacggctgccccgatgagcgcttcgtcctcatggcgactccaaatttg
tccaggaagaacaataaccggaacaacagcagcggaagaatgcccaccatcatctga

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