KEGG   Oxyura jamaicensis (ruddy duck): 118170654
Entry
118170654         CDS       T11549                                 
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1
  KO
K06753  roundabout, axon guidance receptor 1
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:oja00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    118170654 (ROBO1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oja04515]
    118170654 (ROBO1)
Cell adhesion molecules [BR:oja04515]
 Immunoglobulin superfamily
  ROBO family
   118170654 (ROBO1)
SSDB
Motif
Pfam: I-set Ig_3 ig Ig_2 fn3 V-set FN3_DSCAM-DSCAML_C C2-set_2 Pur_ac_phosph_N Ig_PDGFR_d4 Unc5_NetrinR_N DUF7908 Big_4 Ig_J_second
Other DBs
NCBI-GeneID: 118170654
NCBI-ProteinID: XP_035189005
LinkDB
Position
1:join(99216605..99216692,99472965..99473048,99580985..99581311,99596429..99596521,99631719..99631784,99633434..99633504,99689216..99689336,99696982..99697120,99698395..99698522,99713666..99713674,99716337..99716461,99718190..99718361,99721303..99721508,99724280..99724361,99724529..99724697,99724798..99724964,99728053..99728174,99730562..99730793,99732076..99732197,99735679..99735850,99742936..99743133,99746994..99747020,99749703..99749745,99753408..99753562,99757457..99757792,99760244..99760351,99762939..99763083,99763390..99763641,99767322..99767731,99769926..99770078,99778521..99778829,99780126..99780325,99780913..99780927)
AA seq 1681 aa
MKWKHYPFLVIIAACSLSRCHHLLGQLITDSDDLERGNDSGTPLPTSDNGDNSLGYTGSR
LRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRM
LLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVATFLYQKRADDKEDA
TGPYAASLFSPLKRIIEIQHLNTATGSKDLKITVGNNVADFDPPQKCSIKNGITLKIKIT
LKTIRGGKLMITYTRKNDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVD
DSAEFKCEARGDPVPTVRWRKDDGELPKARYEIRDDHTLKIRKVVAGDMGSYTCVAENMV
GKAEASATLTVQVVSEPPQFVVKPRDQVAALGRTVTFQCEATGNPQPAIFWRREGSQNLL
FSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRP
PPVIRQGPVNQTVAVDGTLVLNCVATGTLMATILWKKDGILISTQDSRIKQLETGALQIR
YAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVS
RNTVTLSWQPNLNSGATPTSYIIEAFSHASGSTWQTVAENVKTESFAVKGLKPNAIYLFL
VRAANAYGLSDPSQISDPVKTQDVPPTSQGVDHKQVQRELGDVVLHLHNPTILSSSSIEV
HWTVDQQSQYIQGYKILYRPTPASYGESEWLIFEVRTPTKNSVIIPELKKGVNYEIKARP
FFNEFQGADSEVKFAKTLEEAPSAPPQSVSVTKNDGNGTAIVVTWQPPPEDNQNGMVQEY
KVWCLGNESRYHINKTVDGSTFSVVIPALVPGIRYSVEVAASTGAGPGVKSDPQFIQLDS
HGNPVSSDDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYA
GIRKVPSFTFTPTVTYQRGGDAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSIN
CCTSGNGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTF
NSPNLKDGRFVSQPGQPTPYATTQLIQSNISNNVNNGNGDTNEKHWKPSVQQKQEVAPIQ
YNIMEQNKLNKDYRVNDSIAPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPK
APKQAGMNWADLLPPPPAHPPPHSNSEDYSLSVDESYDQEIPCPVPPARMYLQQDELEEE
EEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCQEDLGHIQHQPDRR
RQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADIEVAKMQNRRLLLRGLE
QTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAE
YAGLKVARRQMQDAAGGRRHFHASHCPRPTSPVSTDSNMSAVVIQKVRPAKKQKHQPGHL
RREVYTDDLPPPPVPPPAIKSPTAQSKSQLEVRPVMLPKLASVEPRTDRSAERKGASYKG
RDGVDGRQHSDVRANSGERRESQEQQSDGKLRGNKTPKREGTPAKTHLLQEDILPYSRPT
FPTSNNPRDPSSSSSMSSRGSGGRQRADQANIARRNVAEMQVLGAYEQEEEEEDEMEETE
S
NT seq 5046 nt   +upstreamnt  +downstreamnt
atgaaatggaaacattatccttttttggtcataatagctgcatgcagcctttccagatgc
catcacttactgggtcagcttattacagactccgacgacctagagaggggaaacgacagc
gggacaccactccccacctctgataatggtgacaattcgctgggctacacaggctcccgt
cttcgtcaagaagattttccacctcgaattgttgagcacccttctgatttaattgtttca
aaaggagaaccagcgactttaaactgtaaagctgaaggaagaccaaccccaaccattgag
tggtataaaggtggggaaagagtggaaactgacaaggatgaccctcgttcccatcggatg
ctgctgcctagcggatctttatttttcttacgcatagttcatgggcgcaagagtaggcca
gatgagggggtctatgtctgcgtggcaaggaattacctcggggaagctgtaagtcacaat
gcatcgctggaagtggcaacatttctatatcagaagcgagctgatgataaggaagatgca
acagggccctatgcagcctctttattctcaccgttaaagaggataatagaaattcagcac
ttgaatactgccactggcagtaaagatttgaagatcacagtaggaaataatgttgctgac
tttgatcctcctcagaagtgctcaattaaaaatgggataacattgaaaatcaaaattaca
ctcaagaccatcagaggaggaaagcttatgatcacatataccagaaagaatgatgctggc
aagtatgtttgtgttggaacaaatatggttggagaacgtgaaagcgaagttgcagagctc
actgttttagaaagaccatcttttgtgaagaggccaagtaatttggctgtaactgtggat
gatagtgctgagtttaaatgtgaggcaagaggtgaccctgttcctacagtaaggtggagg
aaagatgatggggaattaccaaaagcaagatacgaaatccgtgatgatcataccttgaaa
atacggaaagttgtggcaggagacatgggctcgtatacctgcgttgcagaaaatatggtt
ggaaaagctgaagcatcagcaactctaacagtgcaagttgtgtctgagcctccacagttt
gttgtaaagcctcgtgatcaggtagctgcactgggaagaacagtgactttccagtgtgaa
gcaactggaaaccctcagccagccatcttttggcggagagagggaagtcagaaccttctt
ttttcataccagccccctcagtcatccagccgattttcagtttcccagacaggtgacctc
accatcaccaatgtccagaggtcggatgttgggtactatatctgccagacattaaatgtt
gcaggaagtattataacaaaagcctacttggaagttaccgatgtgattgcagaccggcct
cctcctgtcattcgacagggtcctgtgaatcagactgtagctgtagatggtactttagta
ctaaactgtgtggctacaggcactttaatggccactatcctctggaaaaaggatgggatc
ttgatctctactcaggactctcgcatcaagcagttggaaacaggagcactgcagatcaga
tatgctaagctgggcgacactggtcggtacacctgcattgcttcaaccccaagtggcgaa
gctacatggagtgcttacatagaagtccaagaatttggagtcccagtgcagccaccaaga
cccactgacccaaacttgattcctagtgctccatcaaaacctgaggttacagatgtcagc
agaaatacagtaacattgtcatggcaaccgaatttgaattcaggtgcaactccaacctct
tacataattgaggccttcagccatgcatctggtagcacctggcaaactgtagctgaaaat
gtgaaaacagagagttttgcagttaaagggctaaaacctaatgcaatttatctattcctc
gtgagggcagctaatgcgtatggactaagtgacccaagccaaatatctgatccagtgaaa
actcaagatgttccaccaacaagtcagggtgtggatcacaagcaggtccagagagaacta
ggtgatgtggtactacatctgcacaaccctactatcctttcttcctcctcaattgaagtt
cattggactgtggaccaacaatcccagtatattcaaggatataaaatcttgtaccggcct
acaccagcatcctatggagagtcagagtggttaatttttgaagtgaggactccaaccaaa
aacagtgttatcattccagagctgaagaaaggtgtaaactatgaaattaaggcccgcccc
ttttttaatgagtttcaaggagcagatagtgaagtgaaatttgcaaaaaccctagaagaa
gcgcccagtgctccacctcagagtgtttcagtaactaaaaatgatgggaacgggactgca
attgtggtcacctggcagccaccccccgaggataaccagaacggaatggttcaagaatat
aaggtttggtgtcttggcaatgaaagtcgataccatataaacaaaacggtagatggttcc
accttttctgtagtcatccccgccctcgttcctggtattcgatacagcgtggaagtggca
gcaagtactggggcaggacctggagtgaaaagtgatccccagtttatccaattagattct
catggaaaccctgtgtcttcagacgatcaagtcagtttagcccagcagatttctgatgta
gtaaaacagcctgcctttattgctggaattggtgcagcctgttggattatcctcatggtc
ttcagcatctggttatatcgccacaggaagaagcgaaatggactcactagtacttacgct
ggtatcagaaaagtcccgtcttttaccttcacaccaacagtaacctatcagagaggagga
gatgccgtaagcagtggaggcaggccaggtctcctaaacatcagtgaaccagccacgcag
ccatggctagcagatacttggcctaacacagggaacaaccacaatgactgctccatcaac
tgctgcacctctggcaacggaaacagtgatagcaaccttacaacatacagtcgaccagcc
gattgtatagcaaattacaacaatcagctggacaacaagcaaacaaacctgatgttgcct
gagtcaactgtatatggtgacgtggacctaagcaacaaaatcaatgagatgaaaaccttc
aatagtccaaatctaaaggatggaagatttgtcagccaacctgggcagcccactccatat
gccaccactcaactcatccagtcaaatatcagcaataatgttaacaatggcaacggggat
acgaatgagaaacactggaaaccctctgttcagcaaaagcaagaggttgcacccatacag
tacaacattatggagcaaaacaaattaaacaaagattaccgggtaaatgacagcattgct
ccaacaattccatacaaccagtcatatgaccagaatacaggtggatcctacaacagctcg
gatagaggcagtagcacatctgggagtcaagggcacaagaagggtgctcggactccaaag
gctcccaagcaagctggcatgaactgggcagatcttcttccaccccctccagcacatcca
cctccccatagcaatagtgaagattacagtctttcagtggatgaaagctatgaccaagaa
attccttgtccagtcccacctgcgaggatgtatctgcagcaggatgagctagaggaagag
gaagaagatgagcgaggtcctactccacctgttcgaggagcagcttcctctccagccgct
gtctcctatagccatcagtcaactgccactctcactccctctccccaggaagaactccag
cccatgttacaagactgtcaggaggatctgggacacatacaacaccagcctgaccggaga
cgtcagcctgtaagtcctccaccccctccaaggcccatctctccaccacatacgtatgga
tatatctcagggcccttggtctctgatatggatactgatgcaccagaagaggaagaggat
gaggcagatatagaggttgccaagatgcagaataggagactccttttgcgtggccttgag
cagacacctgcctcaagtgttggggatttggagagctctgtaacagggtccatgatcaat
ggctggggttcagcttctgaagaagataacatctcaagtgggcggtctagcgttagctct
tcagatggatcattttttactgatgcagattttgcacaggctgttgcagcagctgcagaa
tacgctggtctgaaagtagccagacgtcaaatgcaggatgctgcaggaggccgtagacat
tttcatgcatcacactgtcctagaccaaccagccctgtctctaccgacagcaacatgagt
gctgttgtaatacagaaggtccgacctgccaaaaagcaaaagcaccagccaggacatctg
cgcagagaagtctacacagatgacttgccaccccctcctgtgccacctccagctataaaa
tcaccaaccgctcagtccaaatcacagctggaggtgcggcctgtcatgttgccaaaactg
gcttctgtagaaccaaggacagacagatctgcagaaaggaaaggagcaagctacaagggg
agggacggagtggatgggagacagcattcagatgtccgggcaaattcaggagagcggaga
gaatcacaagaacagcaaagtgatgggaaattgcgaggaaataaaacaccaaaacgagaa
ggcacaccagcaaaaactcatcttcttcaagaggacatcctgccgtattctagaccaaca
tttccgacatcaaataatcctagagatcctagctcctccagctctatgtcttcaagagga
tcaggaggtagacagagggcagatcaagcaaatatagcccgaaggaatgttgcagaaatg
caagtactgggagcatatgaacaagaagaagaagaagaagacgagatggaggaaacagaa
agctga

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