KEGG   Oxyura jamaicensis (ruddy duck): 118170700
Entry
118170700         CDS       T11549                                 
Symbol
RNF220
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220 isoform X1
  KO
K25174  E3 ubiquitin-protein ligase RNF220 [EC:2.3.2.27]
Organism
oja  Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:oja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oja04121]
    118170700 (RNF220)
Enzymes [BR:oja01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     118170700 (RNF220)
Ubiquitin system [BR:oja04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    118170700 (RNF220)
SSDB
Motif
Pfam: RNF220 zf-C3HC4_2 zf-C3HC4_3 zf-RING_5 zf-RING_2 zf-C3HC4 Rad50_zn_hook Pox_A_type_inc Endonuclease_7
Other DBs
NCBI-GeneID: 118170700
NCBI-ProteinID: XP_035189071
LinkDB
Position
8:join(21585498..21586122,21657300..21657374,21692983..21693112,21704652..21704697,21712949..21713044,21717101..21717143,21724978..21725099,21726118..21726250,21740950..21741046,21742075..21742161,21743858..21743913,21745596..21745674,21760777..21760885,21762150..21762224,21769657..21769728)
AA seq 614 aa
MDLHRAAFKMENSPYLPNPLASPALMVLASTAEASRDASIPCQQPRPFGVPVSADKDVHI
PFTNGSYTFASMYHRQGGVPGAFANRDFPPSLLHLHPQFAPPNLDCTPISMLNHSGVGAF
RPFASTEDRESYQSAFTPAKRLKNCHDTDSPHLRFSDADGKEYEFGTQLPSSSPGSLKVD
DTGKKIFAVSGLISDRETSSSPEDRSDRYRSDNQRGPQASATATHRMILTLPLCKKKATL
FDSQAPICPICQVLLRPGELQEHMEQELEKLTQLNISKNSILKDAMAAGTPKSILLSASI
KREGDSPTASPHSSDDIHHSDRYQTFLRVRANRQTRLNARIGKMKRRKQDEGQVCPLCSR
PLSGSEEEMSRHVEQCLAKREGSCMTEDDSVDIENENGNRFEEYEWCGQKRIRATTLLEG
GFRGSGFIMCSGKENPDSDADLDVDGDDTLEYGKPQYTEADVIPCTGEEPGEAKEREALR
GAVLNGGTPSTRITPEFSKWASDEMPSTSNGESSKQETMQKTCKNSDIEKITEDSAVTTF
EALKARVRELERQLSRGDRYKCLICMDSYTMPLTSIQCWHVHCEECWLRTLGAKKLCPQC
NTITSPGDLRRIYL
NT seq 1845 nt   +upstreamnt  +downstreamnt
atggacttacaccgggcagcgttcaagatggagaactcaccctacctccccaacccgctg
gcctccccggcgctgatggtgcttgcctccaccgccgaagccagccgtgacgcttccatt
ccgtgccagcagccgaggccttttggggtcccggtgtcagcagacaaggacgtgcacatt
ccctttaccaatggctcctacacgtttgcctccatgtaccaccggcaaggcggggtgccg
ggagcgttcgcaaaccgtgactttcccccgtccttgcttcacctccacccccagttcgcg
ccccccaacctggactgcaccccgatcagcatgctgaaccacagcggggttggggctttc
cgccccttcgcgtctaccgaggaccgggagagctaccagtcggccttcacgccggccaag
cgcctcaagaactgccacgacaccgactcgccccacctgcgcttctcggacgctgacggc
aaggagtacgagtttggcacccagctcccctccagctcccccggctcgctcaaggtcgat
gacacggggaagaagatctttgcggtttctggcctcatttctgaccgggagacctcgtcc
agtcctgaggaccgaagtgacagatatagaagcgacaaccaaagagggccccaggcgtct
gcaactgccactcatcgtatgattttaactctccccctctgcaaaaagaaagcaacgttg
tttgacagccaggctcccatctgccccatctgccaggtcctccttcgccctggggagctg
caggagcacatggagcaggagctggagaagctgacccagctgaacatcagtaagaactcc
atcctgaaggatgccatggcagcaggcacccccaagtcaattttgttgtcggcctcaatc
aagcgggaaggagactctccgacagcatcgccccactcctcggatgacatccatcactcg
gacagataccagaccttcctgcgggtgcgagccaaccggcagacgcggctgaacgctcgg
attggaaaaatgaaacggaggaagcaagacgaagggcaggtatgtcccctctgcagccga
cctctgtcaggatccgaggaggagatgagtaggcatgtggaacaatgccttgcaaagaga
gaaggctcctgcatgactgaagatgactctgtggacatcgagaacgagaacggcaaccgc
tttgaagagtacgaatggtgtgggcagaagaggatacgggctaccactctcctggaggga
ggatttcgaggttctgggtttatcatgtgcagtggcaaggagaatccagacagcgacgct
gacctggatgtggatggggacgacacacttgaatacgggaaaccacagtacacagaggca
gacgttatcccttgcactggggaagagccaggtgaagccaaagagagggaggcgctccga
ggtgctgttttaaatggtggcacacccagtactcgaataacaccggagttttctaaatgg
gccagcgatgaaatgccctcaacgagtaatggtgaaagcagtaaacaggagaccatgcag
aagacctgtaagaacagtgacattgaaaaaattacagaagactccgcagtgacaacattt
gaagcgttaaaggctcgtgtccgtgagttagaaaggcagctctcccgtggggaccgctat
aaatgtctcatttgcatggactcttacacaatgcccctgacttccattcagtgctggcat
gtgcactgtgaagaatgctggctgcggactctgggtgccaagaagctctgtccccagtgc
aacaccatcacgtctcccggagaccttcggcgcatctacttatga

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