Oxyura jamaicensis (ruddy duck): 118170707
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Entry
118170707 CDS
T11549
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
oja Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oja03016
]
118170707 (TRMT13)
Enzymes [BR:
oja01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
118170707 (TRMT13)
Transfer RNA biogenesis [BR:
oja03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
118170707 (TRMT13)
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GFIT
Other DBs
NCBI-GeneID:
118170707
NCBI-ProteinID:
XP_035189090
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Position
8:join(3312231..3312344,3312718..3312764,3312849..3312915,3313671..3313733,3313833..3313902,3314338..3314444,3315383..3315550,3316210..3316282,3317152..3317226,3317808..3318213,3318525..3318699)
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AA seq
454 aa
AA seq
DB search
MAAPEPGRCAYFVARKKRFCRMVPALGKRFCGEHGHQEKENDRKRIPCPLDPKHTVYEDQ
LQKHLKKCNSREKPKPVYFVQDINAGLKDVAEIPEKQVTLSSLSKEELENLIIKLKKASN
GLELDLKEQILSHKALHEALNDPKNGESAFKHLKQQASILGNMEKLHLLGPGRCFIEFGA
GRGKLSHWVDVALQDVEDIQFLLVERATTRFKVDGKHKKRDSVFERLQVDIQHLCLNKVP
ILEKKRLPVVGIGKHLCGAATDLALRCLIESYAICCEGENEEPAAKRPKNDKTEVAAKSS
ADNERNKDDFKPVAGIVIALCCHHKCDWTHYVGREFFKSVGLGPVEFHYFQRMSSWATCG
MRETITSTNEESEDHTNTEEHDQPYSKPESGFDTLQGLPVEERKEIGALCKLLIDHGRIK
YLQQRGYRATLQYYTESAISLENVLLTAVPEPAT
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccggagccgggccggtgcgcctacttcgtggcgaggaagaagcgcttctgc
aggatggtcccggctctcgggaagcgcttttgcggggagcacgggcaccaggagaaagaa
aatgacaggaaaagaattccatgtcctcttgatccaaaacacactgtatatgaagaccag
ctacaaaaacacttgaaaaaatgcaattcaagagagaagccaaagccagtctactttgtt
caagatattaatgcaggtttaaaagatgtagcagaaataccagaaaaacaagtaactctc
tcttccctatccaaagaagagctagagaatttaattatcaagttgaaaaaagcaagtaat
ggtctggaacttgaccttaaggaacaaatactgtctcacaaggctttacatgaagcctta
aatgacccaaagaatggggaatctgcttttaaacatctgaaacaacaggcttccatttta
ggtaacatggaaaaattacatttgcttggtccaggaagatgttttattgagtttggagct
gggcgaggaaagctgtctcattgggttgacgttgccttacaggatgtcgaagatattcaa
tttttgcttgtggaaagggcaactacaagattcaaggtggatggaaaacataaaaagaga
gattctgtatttgaaaggcttcaagttgatattcagcacttatgtttaaataaggtgcct
attttggagaagaaaagactacctgtggtaggaattgggaaacatttgtgtggggctgcc
acagatcttgctttgagatgtttgatagaaagctatgcaatttgctgtgaaggagaaaat
gaagagcctgcagcaaaacgtcctaagaatgataagacagaagtggctgctaagagttca
gctgataacgaaaggaacaaagatgactttaagcctgtagctggaattgttattgcactg
tgttgccatcacaaatgtgactggacgcactatgtaggcagagagttcttcaaatcagta
ggacttggaccagtagaatttcattattttcagagaatgagtagctgggccacttgtggc
atgcgagaaaccataacctctactaatgaagaaagtgaagatcacactaacacagaggaa
catgaccaaccatacagcaaacctgagagcggttttgacactctacaagggctaccagtt
gaagagcgaaaggagattggtgccctctgtaaactgctgattgatcatggacgaatcaaa
tatttacaacaacgaggatacagggctacactacagtattacacagagtctgctatatcc
ttggagaacgtcctgttgacagctgtcccagagccagctacatga
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