KEGG   Oxyura jamaicensis (ruddy duck): 118170724
Entry
118170724         CDS       T11549                                 
Symbol
KDM4A
Name
(RefSeq) lysine-specific demethylase 4A
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
oja  Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:oja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oja03036]
    118170724 (KDM4A)
Enzymes [BR:oja01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     118170724 (KDM4A)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     118170724 (KDM4A)
Chromosome and associated proteins [BR:oja03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    118170724 (KDM4A)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 JmjN zf-HC5HC2H PHD DUF7141 LBR_tudor DUF4537 Rad9_Rad53_bind Tudor_5
Other DBs
NCBI-GeneID: 118170724
NCBI-ProteinID: XP_035189110
LinkDB
Position
8:join(21105456..21105593,21105710..21105885,21106783..21106897,21107784..21107977,21109397..21109446,21109742..21109845,21110536..21110673,21111551..21111801,21112496..21112686,21113991..21114346,21116083..21116203,21116794..21116972,21118204..21118408,21118686..21118762,21119495..21119550,21120186..21120294,21121193..21121381,21122055..21122225,21122714..21122833,21123445..21123537,21124600..21124740)
AA seq 1057 aa
MASELEGPNPGARIMTFRPSMEQFRDFSRYIAYVEAQGAHRAGLAKIVPPKEWRPRRCYD
DIDELVIPAPIQQVVTGQSGLFTQYNIQKKAMTVREFRRIANSDKYCTPRYTDFEDLERK
YWKNLTFNAPIYGADVNGTLYEKHVDAWNIGRLNTILDIVENESGITIEGVNTPYLYFGM
WKTSFAWHTEDMDLYSINYLHFGEPKSWYSIPPEHGKRLERLAKGFFPGSAQSCEAFLRH
KMTLISPSILKKYGIPFDKVTQEAGEFMITFPYSYHAGFNHGFNCAESTNFATLRWIEYG
KQSVLCSCRKDMVKISMDVFVRKYQPDRYKLWKAGKDVTVIDHTLPTPEAAEFLKGDLMQ
KVKSGKQYAEEMETGETCKEEVDGDEAKSVPKHRIGTKRHRVCLEVPQEVSESEAFPKEE
LSSAQDEADTAQPCEIPTSEVGQQGEQRRKLSDCGCLARFEELKAVKLEEEEEEEAAALD
LSISHASNSTSVLPTSKQSATCSVQPCSPAYSGSSDSESTDLLPKRTVPGPAGVLTVHSY
AKGDASGSDSEQTSGKKTSATASMNEQELAEAAKEYIRSMKESKKSKGRRQPLSKLPRHH
PLLVKDCISDDEASEQLTPEEEAEETEAWAKPLSQLWQNRPPNFEAEKEYNRTMAQQSPY
CAVCMLFQTYQAECGGNSQSSGVTPGAADGKIRTKPLIPEMCFTTTGCSTDLNLSTPYLE
EDGTSVLITCRNCQVCVHASCYGVPPEKATEDWMCSRCTENALEEDCCLCSLRGGALQRA
NDDKWVHVMCAVAVLEAKFVNIAERSPVDVGKIPLQRFRLKCVFCKKRRKRIAGCCVQCS
HGRCPTSFHVSCAQAAGVMMQPDDWPFVVFITCFRHKIPSQAERAKAALQDLSPGQIVIS
KHKNGRFYQCEVVSLAKETFYEVNFDDGSFSDNLYPEDIVSRDCLQLGPPAEGEVVQVRW
TDGQVYGAKFVASHAIQMYQVEFEDGSQLMVKRDDVYTLDEELPKRVKSRLSIASDMRFT
EIFAEKEVRQERKRQRVINSRYREDYIEPALYRAIME
NT seq 3174 nt   +upstreamnt  +downstreamnt
atggcctcggagctggagggccccaaccccggcgcgcggatcatgacgttccggcccagc
atggagcagttccgcgacttcagccgctacatcgcctacgtggaggcgcagggagcgcac
cgcgccgggctggccaagatcgtgccccccaaggagtggaggccgcggcggtgctacgac
gacatcgacgagctggtgatcccggcgcccatccagcaggtggtgacggggcagtccggg
ctcttcacgcagtacaacatccagaagaaggccatgacggtgcgcgagttccgccggatc
gccaacagcgacaagtactgcacaccccgctacacggattttgaagaccttgaacgaaag
tactggaagaaccttacgttcaatgcccccatctatggtgctgatgttaatggcacactt
tatgagaagcacgtagatgcgtggaatattggcagattgaacacaatcctggatatcgtg
gagaatgaaagtggcataaccattgaaggagtgaatactccttacctctattttggcatg
tggaaaacttcgtttgcttggcatactgaagacatggatctctacagtattaattacttg
cattttggggaacccaagtcatggtactctatccctccagagcatgggaagcggctggag
agacttgccaaaggattctttccgggaagtgcccagagctgtgaagcgtttctccgtcac
aagatgaccctgatctctccatcgattctgaagaaatacggcatcccgtttgataaggtg
acgcaggaagctggagagttcatgataacctttccttatagttatcacgctggctttaat
catggatttaactgtgctgaatctaccaactttgctactcttcggtggattgagtatggg
aaacagtctgtactgtgctcatgccggaaggacatggtgaagatctccatggatgtgttt
gtgaggaagtaccagccggaccgttacaagctctggaaggccgggaaggacgtgactgtc
attgaccatactcttccaacaccagaagcggcagagttccttaaaggggatctcatgcaa
aaagtcaagagtgggaagcagtatgctgaggaaatggaaacaggagaaacgtgtaaagag
gaggtggatggggatgaggcaaaaagtgtgcccaagcatcgcataggaaccaaaaggcac
agagtctgcctggaagtaccccaggaagtgagtgagagtgaggccttccccaaggaggag
ctgagctctgcgcaggatgaagcagacacggcacagccttgtgagatacccacaagtgaa
gttgggcagcaaggtgaacaaaggcgcaagctttcagattgtgggtgcttggccagattt
gaagaactgaaagctgtgaagcttgaggaggaagaagaggaagaagcagctgcgttggac
ctctccatttcgcatgcttcaaattccacttcagttttgccgacttcgaagcagagtgca
acttgcagcgttcagccttgctcgccagcatattctggttcttcagactctgaatcgact
gatctgttgccaaaaagaactgtacctgggccagctggggtgcttacagtccatagctac
gctaaaggggatgccagtggatctgacagtgaacagacttcaggaaagaaaaccagtgct
actgccagcatgaatgaacaagaactggcagaggcagcaaaggagtacataagatcaatg
aaggagagtaagaagtccaagggtcgtcgccagccattgagcaagctcccacgccatcac
ccgctcttggttaaagactgcattagtgatgatgaggcatcggagcaactcactcctgaa
gaagaagctgaagagacagaagcttgggccaagccactgagccagctgtggcagaatcgg
ccaccaaattttgaggctgaaaaagaatacaaccggaccatggcccagcagtcaccttac
tgcgctgtttgtatgctcttccagacgtatcaggcagagtgtggaggcaacagtcaaagc
tctggagtaactccaggtgctgcggatgggaagatccgaaccaaacccctgattcctgaa
atgtgcttcactacaactggctgcagcaccgatctcaatctttcaaccccctacttagag
gaagatggaaccagcgtactcatcacctgcaggaactgtcaagtctgcgttcatgcaagt
tgttatggtgtaccccccgaaaaggctactgaagactggatgtgctccaggtgcacagaa
aatgccttagaagaggactgctgtttgtgttcattacgaggaggagctcttcagagagcc
aatgatgacaagtgggttcatgtaatgtgtgctgtagctgtactggaggcaaaatttgtg
aacatcgcagagcgcagtcctgtagatgttggcaaaatccccctgcaacgtttcagactg
aaatgtgtcttctgcaaaaaacgaagaaagagaatcgcaggttgctgtgtacagtgctcc
cacggtcggtgtcccacgtcctttcatgtcagctgtgcccaagcagcaggagtcatgatg
cagcctgatgactggccatttgttgtcttcattacctgcttcaggcataagatcccatct
caggcagagcgagctaaggctgcactccaagatctgtcacctggacagatagtcatcagc
aagcacaagaatggtcgcttctatcaatgtgaagtggtcagccttgcgaaggagactttc
tatgaggtcaactttgatgatggctccttcagtgacaacctgtacccagaagacattgtg
agtcgagactgccttcagttaggtcctcctgctgaaggtgaagttgtgcaggtcagatgg
acagatgggcaagtttatggagccaagtttgtcgcatcacatgccatccagatgtaccag
gtggaatttgaagatgggtctcagctgatggtgaaaagagatgatgtgtacactctggac
gaggagcttcctaagagagtcaagtcaagactgtcaatagcttcagatatgcgcttcacg
gagatctttgcagagaaggaggtcagacaagagaggaagagacaaagagtgatcaattca
cgctaccgggaagattacattgaacccgcattgtaccgggccatcatggagtaa

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