Oxyura jamaicensis (ruddy duck): 118171693
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Entry
118171693 CDS
T11549
Symbol
NLGN1
Name
(RefSeq) neuroligin-1 isoform X1
KO
K07378
neuroligin
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja04514
Cell adhesion molecule (CAM) interaction
oja04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118171693 (NLGN1)
04517 IgSF CAM signaling
118171693 (NLGN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oja04131
]
118171693 (NLGN1)
Membrane trafficking [BR:
oja04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
118171693 (NLGN1)
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Ortholog
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GFIT
Motif
Pfam:
COesterase
Abhydrolase_3
BD-FAE
Motif
Other DBs
NCBI-GeneID:
118171693
NCBI-ProteinID:
XP_035190882
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All DBs
Position
9:complement(join(19816993..19817815,19818775..19819564,19823590..19823802,20005245..20005397,20014268..20014327,20104208..20104267,20104720..20105212))
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AA seq
863 aa
AA seq
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MAFPRSMWLNCVWRAMIVRLLHMGLNATFAFSMLGFLLHAAAVSSQKLDDTNPVVTTNFG
KIRGIKKELNNEILGPVIQFLGVPYAAPPTGERRFQPPEPPSPWADIKNTTQFAPVCPQN
IIEGRLPEVMLPVWFTNNLDVVSTYVQDQNEDCLYLNIYVPTEDVKRISKECARKPGKKI
CRKGGPLTKKQTDDLGDNDGAEDEDIRDSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASY
GNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGS
GAGGSCVNLLTLSHYSEGNRWSNSTKGLFQRAIAQSGTALSSWAVSFQPAKYARILATKV
GCNMSDTVELVECLQKKPYRELVDQDIQPARYHIAFGPVIDGDVIPDDPQILMEQGEFLN
YDIMLGVNQGEGLKFVENIVDSEDGISASDFDFAVSNFVDNLYGYPEGKDILRETIKFMY
TDWADRHNPETRRKTLLALFTDHQWVAPAVATADLHSNFGSPTYFYAFYHHCQTDQVPAW
ADAAHGDEVPYVLGIPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDT
KFIHTKPNRFEEVAWTRYSQKDQLYLHIGLKPRVKEHYRANKVNLWLELVPHLHNLNDIS
QYTSTTTKVPSTDNTFRPTRKNSVSVTSAFPTAKQDDPKQQPSPFSVDQRDYSTELSVTI
AVGASLLFLNILAFAALYYKKDKRRHDVHRRCSPQRTTTNDLTHAQEEEIMSLQMKHTDL
DHECESIHPHEVVLRTACPPDYTLAMRRSPDDIPLMTPNTITMIPNTIPGIQPLHTFNTF
TGGQNNTLPHPHPHPHSHSTTRV
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcctttccaagatccatgtggctgaactgtgtatggagagcgatgatagtccgcctg
ttacacatgggattgaatgccacttttgctttctctatgcttggatttttgcttcacgct
gcagctgtgtcctcccaaaaattggatgataccaacccagtggtgaccaccaactttggc
aagataagagggattaagaaggaactaaataatgaaattctggggcctgttattcagttt
cttggggttccgtatgctgcccctccaacgggggagcgccgcttccaacctcccgagcct
ccgtctccctgggcagatatcaaaaataccactcagtttgctcctgtgtgtccccagaac
attatagaaggcaggttgcctgaagtcatgcttcccgtgtggtttactaataacttggat
gtagtttccacctatgtacaagatcagaatgaagactgcctctatttaaatatctatgtc
ccaaccgaggatgtcaaaagaatatccaaggaatgtgccagaaaacccggcaagaaaatt
tgtagaaaaggaggtccccttacaaagaaacagacagatgatttaggtgataatgacggt
gctgaagatgaagacattcgggacagtgggggacctaagcctgtgatggtgtatattcat
ggagggtcctacatggaaggcactggaaatttatatgatggcagtgttctagcaagttat
gggaatgtgatagtcatcacagtcaactatcgccttggggtacttggatttttgagcact
ggggaccaagcagcaaaaggaaactatggcctccttgatctaattcaagctttgcgatgg
actagtgaaaatattgggttctttggtggtgacccattaagaataactgtttttggatct
ggtgcaggcggttcatgcgtcaatttgttgactttatcccattattctgaaggtaaccgt
tggagcaattcaaccaaaggactttttcaaagagcaatagctcaaagtggaacagcgctc
tccagctgggcagttagttttcagcctgcaaaatacgccaggatattggctacaaaagtt
ggttgcaacatgtcagacactgtagaattggtagaatgtctacagaagaagccttataga
gaacttgttgaccaagacattcaaccagcaagataccatatagcctttggaccagtaatc
gatggtgatgtgataccagatgatcctcagatattgatggaacaaggagaattcctcaat
tatgacatcatgttgggagttaaccaaggggaagggttaaaatttgttgaaaatattgtg
gatagtgaagatggcatatcagctagtgattttgactttgcagtttctaattttgttgat
aacttgtatggataccctgaaggcaaagacatactgagggaaactattaaatttatgtac
acagactgggcagatcgacacaatcctgagaccagaaggaaaacactgctggctttgttt
actgatcaccagtgggttgcaccagcagtggccacagcagatcttcactcgaattttgga
tcgcctacgtatttctatgccttctaccatcattgccagacagatcaggtacctgcatgg
gcagatgcagcccatggagatgaggttccttacgtactaggaatccccatgattggtcct
actgaattatttccttgtaatttctccaaaaatgatgtcatgttaagtgcagtggtgatg
acgtactggacaaactttgcaaaaactggtgacccaaatcaaccagtgccacaagacaca
aaattcatccatacaaaaccaaatcgttttgaagaagtagcatggaccagatattctcag
aaagaccaactgtatcttcacattggattaaaaccacgagttaaagaacattatagggcc
aataaagtgaacctttggttggaactggtacctcatctgcacaatcttaacgacatttca
cagtatacctctaccacaactaaagtgccatcaacagataacactttcagaccaacaagg
aaaaattctgtttctgttacttcagcctttcctacagccaaacaagatgatcccaaacaa
cagccaagcccattttcagtggatcaaagggactattcaacagaattgagcgttactatt
gcagttggtgcatctttgctgttcctgaacattttggcctttgcagcattgtactacaaa
aaagacaagcggagacatgatgttcacaggagatgtagcccacaacgcactactaccaat
gatcttactcatgcacaagaagaggagataatgtccctccaaatgaagcacactgacttg
gatcatgaatgtgagtccatccatccacatgaggtggttcttaggaccgcctgtccccca
gactacacactagctatgagaaggtctcctgatgatattcccttaatgacacccaacacc
atcactatgatccccaacactataccagggattcaacccctacacacattcaatacattt
actggaggacagaacaatactctgccccatcctcatccccacccccattcacactcaaca
accagggtatag
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