KEGG   Oxyura jamaicensis (ruddy duck): 118171727
Entry
118171727         CDS       T11549                                 
Symbol
RANGAP1
Name
(RefSeq) ran GTPase-activating protein 1
  KO
K14319  Ran GTPase-activating protein 1
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:oja00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    118171727 (RANGAP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oja03019]
    118171727 (RANGAP1)
Messenger RNA biogenesis [BR:oja03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     118171727 (RANGAP1)
SSDB
Motif
Pfam: RanGAP1_C LRR_6 LRR_4 CPSF100_C MCR_beta_N BUD22 PI3K_1B_p101 IFN-gamma Prothymosin DUF6368 CobT Nse4-Nse3_bdg
Other DBs
NCBI-GeneID: 118171727
NCBI-ProteinID: XP_035190974
LinkDB
Position
1:complement(join(42220074..42220143,42224215..42224336,42226145..42226233,42227941..42228043,42228398..42228511,42229004..42229157,42229569..42229653,42230383..42230482,42232146..42232259,42232424..42232582,42233430..42233564,42234561..42234740,42235415..42235474,42236393..42236520,42237750..42237861))
AA seq 574 aa
MASEDITKLAESLAKTKVGGGQLSFKGQSLKLNTAEDAEEVIKQIEEFDGLEALRLEGNT
VGVEAAKVIAKALEKKSELKRCHWSDMFTGRLRSEIPPALISLGDALITAGAQLVELDLS
DNAFGPDGVRGFEALLKSPACYTLQELKLNNCGMGIGGGKILAAALKECHRKSSAQGKPL
ALKIFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGITALAQAFAINSLLKV
INLNDNTFTEKGAVAMAETLKSLRQIEVINFGDCLVRSKGAVAIADAVKEGLHKLKELNL
SFCEIKRDAALTVAEAIEDKAELEKLDLNGNCLGEEGCEQLQEILEGFNMAAVLGSLSDD
EGEEEDDEEDEEDEEEEEEEEEEEEQQQLKERGQGEQDSLTPKKIIDSQDSTPVPSPPVD
VATFLAFPSPEKLLRLGPKCSVLIAQQTDTSDVEKVVSALLRISSVFKDEAPVKTAVHET
TDALMRKAFTSATFNSDAFVTTLLIHMGLLKSEEKIKTVPSLYGILMTLNHMVQQDYFPK
SLAPVLTAFVTKPNRALDSCSFARHMLLQTLHQL
NT seq 1725 nt   +upstreamnt  +downstreamnt
atggcatcagaagacatcaccaagctagcagagtcacttgccaaaaccaaagtgggtggt
ggacagttgagcttcaaaggccagagccttaaactgaatacagctgaagatgccgaagaa
gtgatcaaacagattgaggaatttgatggcctggaagcactgcgcctggaaggcaacacg
gtgggtgtggaggcagcaaaggttattgccaaagccctggagaagaaatcagagctcaag
aggtgtcattggagtgacatgttcactgggaggctaagatctgagatccctcctgctttg
atctctttgggggacgcgctcatcactgctggagcccagctggtggagcttgacctgagt
gacaatgcctttgggccagacggtgtgcgtggcttcgaggcgctgctgaagagccctgcg
tgttacaccctgcaggaactcaagctcaataactgtggcatgggcattggtggtggcaag
atattggcagctgctttgaaagagtgtcacaggaaatcgagtgcccagggcaagcctctt
gctttgaaaatatttgtggctggcagaaatcgtctggagaatgatggcgccactgccctg
gctgaagcttttgggatcattgggactctggaagaggtccatatgccacagaatggaatc
aaccatcctggcatcacagcactggcccaggcctttgctatcaactcactgcttaaggtt
ataaatttgaatgacaacaccttcacagagaaaggagctgtggccatggcagagacgctg
aagtcactacggcagattgaagtgatcaactttggagactgcctagtgcgttcgaagggt
gctgttgctattgcagatgctgttaaagaagggcttcataaattaaaggaactgaatttg
tccttctgtgagatcaaacgagatgctgctctgactgttgctgaagctattgaagataag
gcagagttggagaagttggatctcaatggtaactgcctgggagaagagggatgtgaacaa
ctgcaggagatccttgaaggcttcaatatggcagctgtgctgggatctttgagtgatgat
gaaggggaagaggaggatgatgaagaggacgaagaggatgaagaagaagaagaggaggaa
gaggaagaggaagaacagcaacagcttaaggagagaggacagggagaacaggactcactg
acccctaagaagataattgattcacaggattcaactccggtgccatctcctcctgtggat
gttgccacgttccttgctttcccatcaccagagaagctgctgcgactaggaccaaagtgt
tctgtgctgatagctcagcagacagatacatctgatgtagagaaagtagtttcagctctc
ctaaggatatcttcagtcttcaaagatgaagccccagtaaaaacagctgtgcatgaaaca
acagatgccttgatgaggaaagccttcacttctgccacgtttaattcggatgcatttgtc
acaacactcttgatccacatgggactacttaagagtgaagagaagatcaaaactgtccca
agcctctacggaattcttatgactttgaaccatatggtccagcaagattatttccccaaa
tccctggctccagttctcacagcttttgtcacaaaaccaaaccgtgctcttgactcctgt
tcatttgctcgccacatgcttttacaaaccctccaccagctgtga

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