KEGG   Oxyura jamaicensis (ruddy duck): 118171984
Entry
118171984         CDS       T11549                                 
Symbol
USP8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8 isoform X1
  KO
K11839  ubiquitin carboxyl-terminal hydrolase 8 [EC:3.4.19.12]
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja04137  Mitophagy - animal
oja04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:oja00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    118171984 (USP8)
   04137 Mitophagy - animal
    118171984 (USP8)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:oja01002]
    118171984 (USP8)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oja04131]
    118171984 (USP8)
   04121 Ubiquitin system [BR:oja04121]
    118171984 (USP8)
Enzymes [BR:oja01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     118171984 (USP8)
Peptidases and inhibitors [BR:oja01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   118171984 (USP8)
Membrane trafficking [BR:oja04131]
 Endosome - Lysosome transport
  Others
   Others
    118171984 (USP8)
Ubiquitin system [BR:oja04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    118171984 (USP8)
SSDB
Motif
Pfam: UCH USP8_dimer WW_USP8 UCH_1 Rhodanese Metallothio_Pro
Other DBs
NCBI-GeneID: 118171984
NCBI-ProteinID: XP_035191450
LinkDB
Position
10:complement(join(11330979..11331164,11331396..11331528,11331843..11331985,11332657..11332893,11334153..11334363,11334911..11335123,11335719..11335981,11336371..11336451,11337081..11337170,11337916..11338506,11339626..11339846,11340050..11340194,11341764..11341926,11342249..11342393,11343150..11343207,11343719..11343863,11346480..11346565,11347155..11347299,11348053..11348156))
AA seq 1119 aa
MPAVASVPKELYLCTSLKDLNKKTEIKPEKTSTKSYVQSALKIFKAAEESRLDRDEEKAY
ILYMKYVTVYNFIKKRPDFKQQQDYFHSILGPTNLKKAIEEAERLSDSLKLRYEEAEVRK
RLEERDRQELQKKQEPKDDGKSSAKSSSESTADSKGKSQKINGESKHSLERRDQSESLSG
AVTAEKLFAMMTDKSIELIIMDARSSKDYQESCIPRSISVPEEAISPGVTASWIEARLPE
DSRDQWKKRGHYDYVILLDWFSSAEDLKLGTTLQSLKDALFKWESKTLLQNEPLVLEGGY
ENWLLCFPQYTTNAKVTPPQHRKIEAVTVSLDFTYPSLEEPAPVPPVATIKPSPTEGIEN
EETEANLEERLKSLNRPSVEGAAIPKSDSSFVVNPISITRSIPEVDRTKKPSIKIPDDNR
PKSESTLSDSQPLENGQMVPDRSTKPLHDVKSTLTEEEKSHIHAETAALLEKNKREKELR
ERQQEEQKERLKREKEEQEQKAKEEQREKEYKEKLQQSKEEREQKERDDQIKREQEEKER
VHKETIEAKKQNKNEPENIGAKRIDTDKVSVEEREKGARTPDMQRRVLGDASQTSVSVPG
KQTGVKGQPDSGAQKPGTLREDSEQDTERLKSQREPLMRARSEEMGRIIPGLPLGWVKFL
DPITGTFRYYHSPTNTVHMYPPEMAPSSTPPATPPTRKPKPQVTIEREREHSKLKRSYSS
PDITQAIQEEEKKRIPVTPAVNRENKPIYYTKAEISRLSASQIRNLNPVFGGSGPALTGL
RNLGNTCYMNSILQCLCNAPHLAEYFNRNLYQDDINRSNFLGHKGEVAEEFGVIMKALWT
GQYKYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENND
HLDDLRAAELAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLAST
SKCTLQECLRLFSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYDGR
WKQKLQTSVDFPLETLDLSQYVIGPKNNLKRYNLFSVSNHYGGLDGGHYTAYCKNASKQR
WFKFDDHEVSEISASSVKSSAAYILFYSSYEQRAVDMAT
NT seq 3360 nt   +upstreamnt  +downstreamnt
atgcctgctgtggcatctgtacctaaggagctctatctctgtacttcattgaaagatctc
aacaagaagacagaaataaaacctgaaaagaccagtacaaagagttatgtgcagagtgcc
cttaagattttcaaagcagcagaagaaagcagattggaccgagatgaagaaaaagcttac
atcctatatatgaaatacgtgactgtttataattttattaagaagagacccgattttaag
cagcaacaggattatttccattcaattcttggacctacaaatttaaaaaaagctattgaa
gaagctgaaagactctcagacagccttaaactcagatatgaagaagctgaagttcggaaa
agactcgaagagagggacagacaggagctgcagaagaagcaagaaccaaaagacgatgga
aagagttcagccaaaagctcatcagaaagtacagcagattccaaaggaaaaagccaaaag
attaatggtgagagcaagcattcactggaaagaagggatcaatctgaaagtctgagtgga
gcagtcacagctgagaaactgtttgcaatgatgacggacaaaagcattgaactgattata
atggacgctcgaagctcgaaggattatcaggaatcctgtattccaagatccatcagtgtc
ccagaagaagctatcagtcctggagttactgctagctggattgaagctagactcccagaa
gattctagagatcaatggaagaagagaggacactatgattacgttatactcctggactgg
tttagttctgcagaagatttaaagctaggaacaactcttcagagcctgaaagatgcgctt
tttaagtgggaaagcaaaactctactgcagaatgaacctttagttctagaaggaggttat
gaaaactggctcctttgttttccccagtacacaacaaatgctaaagtaactccacctcaa
catagaaagattgaagccgtaactgtttctttggattttacatatccatctttggaagag
ccagctccagttccacctgttgccactataaagccttctccaacagaagggattgaaaac
gaagaaacagaagctaatttggaagagagactaaaatcacttaacagaccaagcgtagag
ggtgctgctattccaaaatctgacagttcatttgtagtcaatcccatatctattacgaga
agtatccctgaggttgatcgtactaaaaagccttcaataaaaattcctgatgataacaga
ccaaaatctgaaagtacactcagtgacagccagcctctcgagaatggacaaatggttcca
gatcggtccacaaaacctttacatgatgtaaaaagcaccctgacagaagaagaaaaaagt
catatacatgcagaaactgctgccctgttagagaaaaacaaacgagaaaaagaattgcgg
gagagacaacaagaagaacaaaaagaaagactcaagcgagaaaaagaagaacaagagcaa
aaagcaaaggaagaacagagagaaaaggaatacaaagaaaagctgcagcaatccaaagag
gagagagaacagaaggagagagatgaccagataaaaagagaacaggaggaaaaggaaaga
gtgcacaaagagacaatagaagcaaaaaagcaaaataaaaatgaaccagaaaacattggt
gcaaaaaggattgatactgacaaagtatctgtggaagaaagagaaaagggagctcgaaca
ccagatatgcagagacgtgtgctgggtgatgcatctcagacttctgtgtctgttccaggc
aagcaaactggggttaaaggacaaccagacagtggagctcaaaagccaggaacccttaga
gaggattctgaacaagatactgaaagacttaaatctcagcgggagccgttgatgagagca
cgaagtgaagaaatgggaaggataataccaggactgcccctgggttgggtaaagtttctg
gatccaatcactggaacctttcgttactatcattcgccaacaaacactgttcatatgtac
ccaccagaaatggctccttcgtccactcctccagctactccaccaacgcgtaaacccaag
ccgcaggtgactattgaacgagaacgggaacactccaaactgaagcgctcctactcttcc
ccagatataacccaagccattcaggaggaagagaagaaaagaattcctgtaactccagca
gtcaatcgtgaaaataaaccaatctattacactaaagcagaaatttcaagactctctgca
tcacaaattaggaatcttaatcctgtgtttgggggatcgggaccagctcttacaggactt
cgtaatctagggaacacttgctatatgaattccatattacagtgtctgtgcaatgcacct
cacctggctgagtattttaacagaaacttgtatcaagatgatattaacaggtcaaatttc
ctggggcataaaggtgaagtggctgaagagtttggagtaataatgaaagctttatggaca
ggacagtataaatatatcagtccaaaggacttcaaaattacaattgggaagattaatgac
caatttgcaggatatagccagcaagactcccaagaattgcttctctttctaatggatggc
ttgcatgaagatttaaataaagctgacaacaggaaaagatacaaggaagaaaacaatgat
catcttgatgacctcagagcagcagaattagcctggcagaagcacaaacagctcaacgag
tccatcatcgtggcactctttcaaggccagttcaaatctacagtgcagtgtctcacatgc
cacaagaagtcccggacctttgaggctttcatgtatttgtcgttaccacttgcatccact
agtaaatgtacactgcaggaatgccttagattgttctccaaagaagaaaagctcactgac
aataatagattttactgtagccattgcaaaactcgaagggattctttgaaaaaaatagaa
atttggaaattaccacctgttcttcttgtgcacttgaaacgattttcctatgatggaaga
tggaagcaaaaacttcagacatctgtagatttcccattggaaactcttgacctttcacag
tatgttattggtccaaagaataacttgaagagatacaatctattttcagtatcaaatcat
tatggtgggttggacggagggcactataccgcctactgcaaaaatgcctcaaaacaacgc
tggtttaagtttgatgaccatgaagtgtctgagatctcagcatcatctgtgaaatcctca
gctgcatatattctcttttacagttcttacgaacagcgagcagtggacatggccacataa

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