KEGG   Oxyura jamaicensis (ruddy duck): 118172080
Entry
118172080         CDS       T11549                                 
Symbol
NEDD4
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4 isoform X1
  KO
K10591  E3 ubiquitin-protein ligase NEDD4 [EC:2.3.2.26]
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja04120  Ubiquitin mediated proteolysis
oja04144  Endocytosis
oja04530  Tight junction
Brite
KEGG Orthology (KO) [BR:oja00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    118172080 (NEDD4)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    118172080 (NEDD4)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    118172080 (NEDD4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oja04131]
    118172080 (NEDD4)
   04121 Ubiquitin system [BR:oja04121]
    118172080 (NEDD4)
   03029 Mitochondrial biogenesis [BR:oja03029]
    118172080 (NEDD4)
Enzymes [BR:oja01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.26  HECT-type E3 ubiquitin transferase
     118172080 (NEDD4)
Membrane trafficking [BR:oja04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    118172080 (NEDD4)
Ubiquitin system [BR:oja04121]
 Ubiquitin ligases (E3)
  HECT type E3
   118172080 (NEDD4)
Mitochondrial biogenesis [BR:oja03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Morphogenesis factors
    118172080 (NEDD4)
SSDB
Motif
Pfam: HECT WW
Other DBs
NCBI-GeneID: 118172080
NCBI-ProteinID: XP_035191645
LinkDB
Position
10:complement(join(3265626..3265728,3265806..3265878,3269004..3269100,3269725..3269832,3269942..3270001,3270543..3270603,3270742..3270815,3271901..3271996,3273581..3273651,3273749..3273870,3274474..3274703,3276476..3276541,3277328..3277386,3277477..3277531,3277787..3277864,3279011..3279217,3279637..3279756,3280361..3280426,3282224..3282391,3282525..3282642,3283181..3283350,3284223..3284325,3285099..3285160,3287801..3287851,3299354..3300859))
AA seq 1307 aa
MAQRLRLHFATQRSNTDPLSETSEDVLDSNNRMYFKRTQNSEPNVTRMNLTPRQVACAPV
MQQIINQERKANISSLQKKKSTSLHISLQSRKYNGYFRSGDGEDTSFISIGNEGNCGTRI
VVDHPANDSHLSNSAACSGSLSSIAASDNGSLSSAGSDYGSCTSTMSDGGSYSNSVISDS
GSGTLSTSDGTCCSGVVHGDFSYGNISNKCNPYRNNSPQEEVQVCRSNTTFDQDALSVRK
KTKIPLRRCSSLVIFPRSPSSTPPASPITSGQLPHRGAYQTSHKLIISPSEPAHKDQSIS
KGFLSTAVNGLRLSKTVCSSGEVRDVRPLSLNTSLQDKSKILNGSEQATCEEVAGGFSCI
SVHLTQRAFASSSEMVNGCCSAELNLNSSAKYPPLKLARSTSACLPSKIDSECQMNINEL
ERPNAQTSKTHHVLQRSVSLEGSRQKVSCCLSSLKYKCHSARTSQLHIQFKPGNEGKTSG
GNKRYGTSRREISSTSLWRPHKTRDDFLGQVDIPLYQLPTENPSMERPYTFRDFVLHPRS
HKSRVKGHLRLKMTYLPKSNGSEEEGTEQAEELEPGWIILDQPDAANQPQQQQQESPPLP
SGWEERQDILGRTYYVNHEFRRTQWKRPTAQDNVAVADIGNMQLEAQHVFTHRRQISEDT
ENLDNRDSPESWEIITEDEATMYSNENPQIPLPQNNCDIQTHLAEELNTRLTTSGSSATG
QSTAYVNHSGRRGSLQTYRVEEQPAHPVLLPTSSGLPPGWEERQDEKGRSYYIDHNCRTT
TWIKPVVQVAVEAGQLSTAQSTSIARQPQATSSDLPQQSSNQQPEMEQGFLPKGWEVRHA
PNGRPFFIDHNTKTTTWEDPRLKIPAHLRRKTSLDPVDLGPLPPGWEERTHTDGRVFFIN
HNTKKTQWEDPRLQNVAITGPAVPYSRDYKRKYEFFRKKLKKQSDIPNRFEMKIHRTTIL
EDSYRRIIAVKRADFLKARLWIEFDGEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSAT
DNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMLQKPITLHD
MESVDSEYYNSLRWILENDPAELDLRFIVDEELFGQTHQHELKSGGSEIVVTNKNKRDYI
HLVIQWRFVSRVQKQMAAFKEGFFELIPQDLIKIFDENELELLMCGLGDVDVADWKLHTK
YKNGYNVNHQVIQWFWKAVLMMDSEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTVE
QWGTPEKLPRAHTCFNRLDLPPYDSFEDLWDKLLLAIENTQGFDGVD
NT seq 3924 nt   +upstreamnt  +downstreamnt
atggcacaacggttaagactgcattttgcaactcaaagaagtaacacagatccgttatca
gaaacctccgaagatgttttggatagtaacaatcggatgtacttcaaaaggacacagaac
tctgaacctaatgttacacgaatgaacctgactcctaggcaagttgcttgtgcacctgta
atgcagcaaataattaatcaagagagaaaggcaaatatttcttcactgcaaaaaaaaaag
agcacctcactgcatatttctctacagtccagaaagtataatggatattttcggtctggt
gacggcgaagacacttcattcatcagtattggtaacgaaggaaattgtggcactagaatt
gtggttgatcatccagctaatgacagccatctgagcaatagcgctgcgtgcagtggcagt
cttagcagtattgcagccagtgacaatggatccttgagcagtgctggtagtgactatgga
tcgtgtacaagtaccatgagtgatggaggttcctatagtaacagtgtcatcagtgacagt
ggtagtggcactctttccacgagtgatggtacttgctgtagtggtgttgtgcatggtgac
ttttcatatggaaacatttctaacaaatgtaatccctatagaaacaactcacctcaggaa
gaagtacaagtgtgtagaagtaatactacttttgaccaagatgctttgtcagtgaggaag
aaaactaaaattccactgcggcggtgttcatcgttggtaattttccctaggagtccttcc
agtactcccccagcttctcccataacctcaggtcagctgccacatagaggtgcctatcag
acatcacataaactaattatttctcctagtgagccggcacataaagatcaaagcatttcc
aagggtttcctttcaacagcagtcaatggacttcgactgtctaaaacagtttgctcttct
ggtgaagttagagatgttcgaccgctttccttgaatacatcattacaggacaaaagtaaa
attttgaacggctctgagcaggcaacttgtgaagaagtagctggtggcttctcgtgtatt
tcagttcatctgactcaaagagcatttgcatcgagcagtgaaatggttaacggctgttgc
agtgcagagttaaatctgaactccagtgcaaaataccctcctttaaaactggcacgtagc
acatctgcatgtttaccctcaaaaatagattcagaatgccagatgaatataaatgaactg
gaaagaccaaatgcacagacaagcaaaacccaccatgttttgcaaagaagtgtatcattg
gaaggatcacgtcaaaaagtttcttgctgtttatccagtcttaaatacaagtgtcatagt
gcaaggacgtctcagttgcatatacagttcaagccggggaatgaaggaaaaacaagtggt
ggtaacaaaagatatggaacctctagaagggaaatatctagcacttctttgtggaggccc
cataagactcgagatgattttcttgggcaagtggatattcctctttatcagttaccgaca
gaaaacccaagtatggagagaccatatacatttagggattttgttcttcatccaagaagc
cataagtcaagagttaaaggccaccttagattaaaaatgacttacttacctaaaagcaat
ggatctgaagaagaaggcacagaacaggccgaagaattggagcctgggtggattatattg
gaccaaccggatgctgctaaccagccacaacagcagcagcaggaatctcctccactgcct
tcaggctgggaagaaaggcaagacatcctcggcaggacctattatgtcaatcatgaattc
aggagaacacagtggaaaagaccaactgctcaggacaacgtagctgttgcagatatcggt
aacatgcagctggaagcccagcatgtattcactcatcgtcgacagatatcagaggatact
gaaaatctagacaacagagattcccctgagagctgggaaattataactgaagatgaggca
acaatgtatagcaatgagaaccctcaaatacctctcccacagaataattgtgatatacag
actcatcttgcagaagagttgaataccagacttactacctctggaagttcggctactggc
cagtcaacagcctacgtgaaccattctggcagaagaggtagtctgcaaacatacagagtt
gaagagcaacctgcacatccagtgttactgcctacttcgtctggattaccgccaggctgg
gaagaaagacaagatgaaaaagggaggtcatactatatagatcacaattgtagaactact
acttggataaaaccagttgtacaggttgctgtggaagcaggtcagttgtcaactgcacaa
agtacttctatagcaagacaaccacaagcaacatcaagtgatttaccacaacagtcttct
aatcagcagcctgaaatggagcaaggttttctccctaaaggctgggaagttcgacatgca
cccaatgggagaccattctttattgaccacaataccaaaactacaacatgggaagatcca
agactgaaaattcctgctcatctgaggaggaaaacttccctagatccagtagatctaggg
ccattaccaccaggttgggaagagagaactcacacagacggaagagtattcttcataaac
cacaatacaaagaaaacacaatgggaggatcctcgactgcagaatgtggcaataactgga
ccagctgtgccttactccagagactataagcggaaatatgagttcttcagaaagaaattg
aagaaacagagtgatattccaaacagatttgaaatgaaaattcatcgcacaacaatcctt
gaggattcttatagaagaattatagctgtaaagagagcagatttccttaaagcgagactc
tggattgagtttgatggtgaaaaaggtttagactatggaggagtggccagggaatggttc
ttccttctctctaaggaaatgtttaatccttattatggattatttgaatattcagctacc
gataactatactctgcagatcaacccaaactctggactctgcaatgaagatcatctctca
tatttcaagtttataggtcgagtagctggaatggctgtttaccatggcaaacttctggat
gccttttttattcgtcctttttacaagatgatgctacaaaaaccaataacacttcatgat
atggagtctgtggatagtgaatattacaattctctgagatggattcttgaaaatgatcca
gcagagctggaccttagatttatagttgatgaagaactttttggacagacccatcaacat
gaactgaaaagtggtggatcagagatagttgtcaccaacaagaacaagagagactatatt
catcttgtaatacagtggagatttgtgagcagagtacaaaaacaaatggcagcctttaaa
gagggcttttttgaactaatacctcaggatctgattaaaatttttgatgaaaatgagctg
gagttgttaatgtgtggactgggagatgtggatgtggctgattggaaactacatacaaaa
tacaaaaatggctacaatgtaaaccatcaagtaatacaatggttctggaaggcagtctta
atgatggattctgaaaagagaataagattactgcaatttgttactggcacatctcgtgta
cctatgaatgggtttgctgagctgtatggttcaaatggaccacagttgtttacagttgaa
cagtggggtaccccggaaaaactgccaagagctcatacctgctttaatcgcttggatttg
cctccttatgactcctttgaagatttatgggataaacttctcctagcgattgaaaatact
cagggttttgatggggttgattaa

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