KEGG   Oxyura jamaicensis (ruddy duck): 118172119
Entry
118172119         CDS       T11549                                 
Symbol
AP4E1
Name
(RefSeq) AP-4 complex subunit epsilon-1 isoform X1
  KO
K12400  AP-4 complex subunit epsilon-1
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:oja00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    118172119 (AP4E1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oja04131]
    118172119 (AP4E1)
Membrane trafficking [BR:oja04131]
 Endosome - Golgi transport
  Others
   AP-4 complex
    118172119 (AP4E1)
SSDB
Motif
Pfam: Adaptin_N AP4E_app_platf Cnd1 INTS1_R4 Coatomer_b_Cpla
Other DBs
NCBI-GeneID: 118172119
NCBI-ProteinID: XP_035191721
LinkDB
Position
10:complement(join(1769861..1770021,1770463..1770620,1771328..1771512,1772904..1773479,1774238..1774493,1775553..1775688,1776789..1776903,1777638..1777940,1778936..1779054,1779195..1779307,1780422..1780561,1780853..1780962,1781048..1781170,1783843..1783916,1784520..1784686,1785202..1785361,1785921..1786042,1787349..1787422,1789603..1789726,1791223..1791294,1791618..1791758))
AA seq 1142 aa
MSDVVERTLSALPALLGPQQPAGPGRLSASSRLGSLIRSITALTSKHEEEKLIQQEIASL
KAMVSAPTTTLRLMKECMVRLIYCEMLGYESSFGYIHAIKLAQQGNLLEKRVGYLAVSLF
LHENHELLLLLVNTVVKDLQSTNLVEVCMALTVVSQIFPREMIPAVLPLIEDKLQHSKEI
IRRKAVQALYKFYLIAPNQVQHIHDKFRKALCDRDVGVMAASLHIYLEMIKENSSGYKDL
TESFVMILKQVVGGKLPVDFNYHSVPTPWLQIQLLRILGLLGKDDPRTSELMYDVLDESL
RRAEINHNITYAILFECVQTIYTIHPKSDLLEKAAKCIGKFVLSPKINLKYLGLKALTCV
IQQDPNLALQHQMTIIECLDHPDPIIKRETLEILYRITNGQNVIVIVQKMLDYLKESKEE
YAIITLAGKVAELAEKYAPDNGWFIQTMNAVFSVGGDALHPDIPNNFLRLLAEGFDDRKE
DEQLRTYAVRSYLTLLEEESTFYPQKFLQVMSWVLGEYSSLATDVDPEIILTRLHSLLKK
TFVTSDTKAWIMAAVTKIASRTSCSKTIDKLIKEFSSSLDTCMRQHAFELKHLCEDQVLM
KNLLPFDASCNDMVVDASLSFLDGFVAEGLSRGAAPYKPHHQRQEEKLSQEKALNFEPYG
LSFASSVSSSGITGRQSPTGLSFGSDTSGNSAETGHKETNTLKLEGIRKLWGKEGYLPKK
ESKAEKPDEPQAASCGNLLAGRVTDPPASQSDQGSSLSEEEKEKQQLASTLFVGLGSNAS
VSLMGKTDVATQKFKRKSKINETQNSEEASDIQNSAASALGPLLDTVPVNREDCEGNKHT
RLRKPSLCSSDTVEDNLAFETPQSLKKPGLDDSLLSESLSPLSLFADSNIEIFQPSPSAL
CESANKTLLVPSLPKELEELPHSEVVELCQSDAIALYLCKVWKDDSLLLAVFASNKKSSA
LNAVTLVFEKAEHFQILGSPAHQFSVIEAQSVEHCQKCVWMDKICTQGILPGSISYQSEM
ESCLEFSVTLSLLDFIRPMEMTTEDFGQLWLSLSNDVKQNIKLAPSQDSLSAALRMLQEK
LKLHIVDIIGNEGILACQLLPSVPCLLHCRTYSGMLALWFRSPCSALPDGLLYQCQKVME
ES
NT seq 3429 nt   +upstreamnt  +downstreamnt
atgagcgacgtggtggagcgcacgctgagcgcgctgcccgccctgctgggcccgcagcag
cccgccggccccggccgcctgtcggccagctcgcggctcggcagcctcatcaggagcatc
acggcgctcacctccaagcacgaagaagagaagctaatccagcaggagatagccagtttg
aaagcaatggtttctgcccccaccactacgcttaggctgatgaaagaatgtatggtgaga
ctcatctattgtgaaatgctgggatacgaatcttccttcggatatatccatgcaatcaaa
cttgcacagcaaggaaaccttttggagaaaagagttggttacttagctgtttctttattt
ctccatgaaaatcatgaactgctgcttctacttgtcaacacagttgtgaaggacctacag
agcactaatcttgtagaggtgtgcatggcattaactgttgtcagccagatctttccacgg
gagatgattccagctgttcttcccttaatagaagacaagctccaacattcgaaggaaatt
atccgaagaaaggctgttcaagctttatataaattctatctcattgctcctaaccaagtc
cagcatattcatgataagttccggaaagccttatgtgacagggatgttggagtcatggct
gcttctttgcatatttatcttgaaatgattaaggaaaactcatctggatataaggacttg
acagagagttttgtaatgatcctgaagcaggtagtgggaggaaagcttcctgttgacttc
aactatcacagtgtgccaacgccatggttacagattcagcttttaagaatattagggctg
ttaggaaaagatgatccaaggacaagcgaattgatgtatgatgttctggatgaatcttta
agaagagcagaaataaatcataatattacatatgccatcttgtttgaatgtgtccaaaca
atttatacaattcaccccaaatctgacctactcgaaaaggctgccaagtgtattggaaaa
tttgttttgtcacccaaaattaatttgaaatacttaggtttaaaggctctaacctgtgtt
attcagcaggatcctaatctggcacttcagcaccagatgacgataattgaatgtctggac
cacccagatcctattattaaaagggagactttagagattctttatagaattacaaatgga
cagaatgtgattgtcatagttcagaagatgcttgactacttaaaagaaagcaaggaagag
tatgctatcatcaccttagctggcaaagtagcagaacttgctgagaagtatgcccctgac
aacgggtggttcatccaaacaatgaatgcagtgttttcggttggaggtgatgctctgcat
cctgacatcccaaacaactttctgaggcttttggctgaaggatttgatgatagaaaagaa
gatgaacagctacggacgtacgcagtacggtcttatttgacattacttgaagaggaaagt
acattctatccacagaaattcctacaagtcatgagctgggttttgggggaatattccagt
cttgctaccgatgttgatccagaaattattttgacaaggctacacagcttgctgaagaag
acttttgtgacctctgacactaaagcatggattatggctgcagtcaccaagatagcatca
cgcacttcctgctctaaaacaattgacaaactaatcaaagaattcagtagctctctagac
acttgcatgagacaacatgcctttgaattgaaacatctctgtgaagaccaagtattgatg
aaaaacttgcttccgtttgatgctagttgcaatgacatggtggtagatgcttccttatct
tttctggatgggtttgtggctgagggacttagccgtggtgcagcgccatataagcctcat
caccagagacaagaggagaagctttctcaggaaaaagctctgaattttgaaccgtatgga
ttatcatttgcttcaagtgtgtcctcatctggcatcactggtagacagtcccccactggt
ttatcttttgggtctgatacgtcgggtaacagtgctgagactgggcataaagagacaaat
actctgaaacttgagggaataaggaagttgtggggcaaagaaggttatcttccaaagaaa
gaaagcaaagctgagaaaccagatgagccacaggctgcttcttgtggcaacttattagca
ggacgggtgactgatcctcctgcatctcagtctgatcaaggttccagcctctctgaggaa
gaaaaagaaaagcagcagttggcatcgacattgtttgttgggctgggatcaaatgctagt
gtcagtctgatggggaaaacggatgtggctactcagaagttcaaaagaaaatcaaagata
aatgaaacccaaaacagtgaggaggcatcagacatccagaacagtgctgcttcagctctt
ggtcccttacttgatacagtgcctgttaacagggaagactgtgagggaaataaacacaca
agattaagaaaaccttccctctgttcttcagatactgtggaagataacttagcatttgaa
acacctcagtcccttaagaagcctgggctggatgacagcctactgtctgaaagtctatca
ccattgtctttgtttgccgatagtaatattgaaatttttcagccttctccaagtgctttg
tgtgaaagtgccaacaaaacattgttggtcccttccttaccaaaagaactagaagagctc
cctcactccgaagtagtggaactttgtcagagtgatgccatagctctgtatttatgtaag
gtgtggaaagatgactctttgttgctcgctgtgtttgcttcaaataaaaagagttctgca
cttaatgctgtgaccttagtgtttgaaaaagcagaacactttcagattctggggagtcct
gcccaccagttctctgtaattgaagctcagagcgtggaacattgccagaaatgtgtttgg
atggacaaaatctgtacacagggaattcttcctggctccattagttaccagtcagagatg
gaatcttgccttgaattttcagtaactttatcattgttggatttcatcaggccaatggaa
atgactacagaagacttcgggcaactgtggttgtccctttccaatgatgtgaaacagaat
ataaaactggcgccttctcaagattccctctcagcagctctgcgtatgctgcaagagaag
ctgaaactccacatcgtagatattataggtaatgaggggatactggcatgccagctgctt
ccatccgtgccctgtctgctgcactgtcgtacatactcagggatgctggccttgtggttc
agatcaccttgttcagctcttccagatggtctgctctatcagtgtcaaaaggtgatggaa
gaatcctag

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