KEGG   Oxyura jamaicensis (ruddy duck): 118172574
Entry
118172574         CDS       T11549                                 
Symbol
CARMIL2
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 2 isoform X1
  KO
K20493  leucine-rich repeat-containing protein 16
Organism
oja  Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:oja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oja04131]
    118172574 (CARMIL2)
Membrane trafficking [BR:oja04131]
 Others
  Actin-binding proteins
   Nucleation-promoting factors (NPFs)
    118172574 (CARMIL2)
SSDB
Motif
Pfam: CARMIL_C Carm_PH LRR_6 Glyco_transf_90 Transglut_core
Other DBs
NCBI-GeneID: 118172574
NCBI-ProteinID: XP_035192466
LinkDB
Position
11:join(777854..777893,778909..779000,779234..779284,779406..779465,780396..780517,780758..780855,781405..781475,781677..781750,782236..782311,782383..782471,782868..782962,783117..783203,783327..783436,783566..783643,783750..783826,783907..784011,784163..784232,784339..784420,785495..785591,785687..785744,785919..786091,786561..786629,787244..787337,787418..787513,787675..787803,788341..788454,788669..788844,789134..789221,789606..789725,790249..790315,791265..791470,793210..793313,793667..794060,794243..794362,794588..794624,794757..794825,794963..795229,795329..795430,795593..795685,795766..795938)
AA seq 1440 aa
MAASPGGIPAELQEGIAASLGTKKILLVKSVQLQVKSKYDDFILVLTPWRAYVVPAMLPV
RVHSSFSFLEVRDIAVREPSVVVIETDTSSYSFRLMSFDDVEQVVIHVTMSLKKVFPDSS
PGTLLKNSPPNLYERIRRVTDSLEEMLQSNQGPCGGFSETYAALCDYNGFAFREEVQWDV
DNIYHGQDCREFNLLDFSHLESRDVALSVAALSFNLWFTKLSCKDFRLNQEIAEQLLYML
SKSVTLEELALENSGLRCDFAQRMAQALSRHPDSVLHTINLAGNQLEDRGVIAFSRYFEK
RPKGLQGLSLARTMLAAKGMSALCQALAANEAIGSSLRHLDLSGNPGSLAVEDTTSLQSL
LGRCASLAHLSLAATDCSLDTLFGALVQGCCASLVHLDLSKNTYSHRKVKAVPPDIKHFF
SQARALRHVSVAGTKLPPDAVRAMLQGLAYNSHISDLHLDLSGCELRSAGAQVIQDLIPD
ASAISDLDLSDNGFDSDMVTLVLSIGRSKSIRHVSLGKNFNIKSKDGLLDVLHRIVQLTQ
EDDCPLQSLSVAESRLKLGTNVLLSALGSNTSLTALDISGNAMGDTGAKMLAKALQINTK
LRTVVWDRNNTTAFGLLEVAQALERNYTLKSMPLPMSDVVQAYRSNPERTEEAVHKLQSC
LARNQMRRALPAQTFRLQQGILASSSEQMVNEICLSVQKHVDILSSCPGREVEADILCAE
EAIRNANLAVSILPLLYEAGNTPHQSGKLQHKLECLTEEASQTCGREIQAIMQAAMDTAH
NLCPPVMQKSGVRDQLVNAMSERIHLQEHLNLSSVLDQMVTDVFSKLNEIKLSVTAAVAD
CIVDAVLGDLSAAQCKLAESLPTHGPDLLEPAEDDAAALARSRNLSDLAEKGFAVEEYKM
ALRRKNKHFRSIRPTPTVRSPSELELPASGKARPAATKDAEPAAGALPGTPPAEALMDLP
TAGERLEHCTKARPRPNRRHKQPPSKPNVQPVVHENSEDRSITRVDEGLEDFFTKRLISE
ELPPMVLESGPGSAPLVSSSSRTLKKKIGNFFAFKKPKSSRGSRCEKEPEGSTAAPRSRR
SMLSDILRAPSKAGEPGKALSKSEEGALSTEPEHSQTPEAARRIRPKYSREGKSQSLILL
PGEDEEALGVRQDKRRHLEKSDGELPNSFEQRVHVMLHRMGVTKGLAAEGKKQQCKDSEI
KKAGSDGDIVDSSADSPPSLKARTHSVSTDVALRSAVEPSPAWKALGRQLNAELTGPSWE
QPRRCSAGPEQSGQPACREAWSSSLPRPGRSAPPRRISHGGEPAAGTPLPISPRSGTEDN
RLTPRLAAPSGRRAVSVHEEQLREPQCLAELGTVTIPLRLRRSPVLKRRPEVASEPSPTS
EAGGTTPQDRPRGGLEEPQPGATGYGERPGGLTQTVANAQDSAVDQRSPVPGRGEPALGQ
NT seq 4323 nt   +upstreamnt  +downstreamnt
atggccgcgtcccccggggggatccccgctgagctgcaagagggcatcgctgcttccctg
gggacaaagaagatcctcctggtcaagagcgtccagctgcaggtgaaatccaagtacgac
gactttatcttggtgctgacgccctggcgagcctacgtggtgccggcgatgctgccggtc
agggtgcacagcagcttcagcttcctggaggtgagggacatcgccgtgcgagagcccagc
gtggttgtcatagaaacggacacctcgtcttactccttccggctcatgtccttcgacgac
gtggagcaagttgtcatccatgtcaccatgtcacttaagaaggtcttcccggactcatcc
cctgggacgctgctcaagaactcgccccccaacctgtacgagaggatccggagggtcacg
gactcgctggaggagatgctgcagagcaaccaggggccctgcggtgggttttcagagacc
tacgccgccttatgcgattacaacggctttgccttccgcgaggaggtccagtgggacgtg
gacaacatctaccacggccaagactgccgggagttcaacctgctggacttcagccacctg
gagagccgggatgtggcgctgagcgtcgctgccttgtccttcaacctgtggttcaccaag
ctctcctgcaaggacttcaggctgaaccaggagatcgccgagcagctgctgtacatgctc
agcaagtcggtgacgctggaggagctggcgctggagaacagcgggctgagatgtgacttt
gctcagaggatggcccaggcgctcagcagacatcccgactccgtcctgcacaccatcaac
ctcgccggcaaccagctggaggacagaggggtaatcgccttcagccggtactttgagaag
agacccaagggcctgcagggcctcagcctggccaggacgatgcttgctgctaaagggatg
agcgcgctgtgccaggcgctcgcagccaacgaagccatcggctcctcgctccggcacctg
gacctctcggggaaccccggcagcttggctgtggaggacaccaccagcttgcagagtctc
ctgggccgctgcgcctcgctcgcccacctcagcctggctgccaccgactgctccctggac
accctctttggggcgctggtccaaggatgctgcgccagcctggtccacctggacctctcc
aaaaacacgtactcacaccggaaggtgaaagccgtccctcctgacatcaagcacttcttc
agccaggcccgtgcgctcaggcacgtctctgtggcgggtaccaagctgcctccagatgcc
gtcagggccatgctgcaagggctggcgtacaacagccacatcagcgacctgcacctggat
cttagcggctgcgagctgaggtctgcgggggcccaggtcatccaggatctcatccccgac
gccagcgccatcagcgacctggatctgtctgacaacggcttcgactccgacatggtgacg
ctggtgctgtccattggcagaagcaagtccatccggcacgtctcgctggggaagaacttc
aacatcaaatccaaggacgggcttctggacgtcctgcaccgcatcgtccagctcacccag
gaggacgactgccccctccagtccctgtctgtggccgagtcgcgcctcaagctgggaacc
aacgtcctgctgagcgccctgggcagcaacaccagcctcaccgcgctggacatcagcggc
aacgccatgggcgacaccggcgccaagatgttggccaaggccctgcagatcaacacgaag
ctcaggaccgtggtttgggacaggaacaacacaactgcctttggcctcctggaggtggct
caggctttggagaggaactacaccctcaagtccatgcccctgccgatgagcgacgtggta
caggcctaccggagcaaccccgagaggacggaggaggccgtgcacaagctccagtcctgc
ctggcgaggaaccagatgcgtcgcgcgctgcccgcgcagaccttccggctgcagcagggc
atcctggcctcctcctccgagcagatggtgaacgagatctgcctgagcgtgcagaagcac
gtcgacatcctgagctcctgcccgggacgggaggtggaggcggacatcctctgtgccgag
gaagccatcaggaacgccaacctggccgtcagcatcttgcccctgttgtacgaagcgggg
aacaccccgcaccagagcggcaagctgcagcacaagctggagtgtctcaccgaggaagcg
tcgcagacctgcggccgggaaatccaggcgatcatgcaggcagcgatggacacggcgcac
aacctgtgcccgcccgtgatgcagaagagcggggtgagggaccagctggtcaacgccatg
tcagagcgcatccacctccaggagcacctcaacctcagctccgtcctggaccagatggtc
accgacgtcttcagcaagctgaacgagatcaagctgtctgtcacagccgccgtggccgac
tgcatcgtggatgccgtgctgggagacctgtctgccgcccagtgcaagctggcggagagc
ctccccacgcacgggccggatctcctggagcccgctgaggacgatgccgccgcgctggcg
cggagcaggaacctctcggacctcgctgagaaaggcttcgcggtggaggagtacaagatg
gctctgcggaggaaaaacaagcatttcaggagcattcggcccacgccgaccgtgagaagt
ccctcggagctggagctgccggccagcggcaaggcgcgcccggctgccacaaaggatgct
gagcccgccgccggtgctctccccggcacgccgcccgccgaagccctcatggacctgccg
accgcgggcgagaggctggagcactgcaccaaagccaggcccaggcccaaccgcaggcac
aagcagccgccgagcaagccgaacgtgcagcccgtggtccatgagaacagtgaggaccgg
agcatcacccgtgtggatgagggcctggaggacttcttcaccaagaggctcatcagcgag
gagctgccccccatggtgctggagagcggccccggatcagcccctctggtgtcctccagc
tcccgcaccctcaagaagaaaatcgggaatttttttgccttcaagaagcccaaatccagc
cggggctcgcgctgcgagaaggagcccgagggcagcacggcagctcccaggagcaggcgg
tcgatgctcagtgacattttacgggcccccagcaaggcgggcgagccgggcaaggcgctg
agcaaatccgaggagggggccctcagcaccgagcccgagcacagccagacccccgaggct
gcccgcaggatcaggcccaagtactcgcgggagggcaagtcccagtccctcatcctgctg
cccggggaggacgaggaggcgctgggggtcaggcaggacaagaggaggcacctggagaag
agcgacggggagctgcccaactccttcgagcagcgcgtccacgtcatgctgcaccgcatg
ggcgtcaccaagggcctggccgccgagggcaagaagcagcagtgcaaagacagcgagatc
aagaaagccggttcagatggagacatcgtggacagctctgcggactccccaccgtccctg
aaggcccgcacgcactccgtgtccacagacgtggccctgcgcagcgcggtggagcccagc
ccggcctggaaagcgctggggcggcagctgaacgcggagctgacggggccgagctgggag
cagccccggcgctgctccgcgggccccgagcagagcgggcagccggcgtgccgcgaggcc
tggagcagcagcctgccgcggccggggaggagcgcgccgccgcgccgcatcagccacggc
ggggagccggccgccggcacccccctgcccatatcgccccgctctggcaccgaagacaat
cgcctgacgccgcggctggctgcgcccagcggccgccgggctgtgtcagtccacgaggag
cagctcagggagccgcagtgcctggccgagctgggaaccgtgacgattcccctccgtctg
cggcggtcgcctgtgctgaaacggagaccggaggtggccagcgagcccagcccaacctcg
gaggcaggaggcaccacgccgcaggaccggccccgtggcgggctggaggaaccgcagcca
ggagcgacggggtacggggagcggccgggaggcctgacacagactgttgcgaacgcacaa
gactcagccgtagaccaaagaagccccgtgccaggccggggggagccggccctgggacag
tga

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