Oxyura jamaicensis (ruddy duck): 118172711
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Entry
118172711 CDS
T11549
Symbol
JPH3
Name
(RefSeq) junctophilin-3
KO
K19530
junctophilin
Organism
oja Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
118172711 (JPH3)
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GFIT
Motif
Pfam:
MORN
Phage_holin_6_1
Motif
Other DBs
NCBI-GeneID:
118172711
NCBI-ProteinID:
XP_035192690
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All DBs
Position
11:join(18927894..18928275,18941574..18942351,18960038..18960162,18963911..18964827,18974008..18974088)
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AA seq
760 aa
AA seq
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MSSGGRFNFDDGGSYCGGWEDGKAHGHGICTGPKGQGEYSGSWSHGFEVLGVYTWPSGNT
YQGTWAQGKRHGIGMESKGKWVYKGEWTHGFKGRYGVRECTGNGAKYEGTWSNGLQDGYG
TETYSDGGTYQGQWVGGMRQGYGVRQSVPYGMAAVIRSPLRTSINSLRSEHTNGTALHPD
SSPAVAGSPAVSRGGFVLMAHSDAEILKSKKKGIFRRSLLSGLKLRKSESKSSLASQRSK
QSSFRSEAGMSTVSSTASDINSTISLGEGEAELSVIEDDIDATTTEIYVGEWKNDKRSGF
GVSQRSDGLKYEGEWANNKRHGYGCMTFPDGTKEEGKYKQNVLVSGKRKNLIPLRASKIR
EKVDRAVEAAERAATIAKQKAEIAASRTSHSRAKAEAAVTAAQKAQEEARIARITAKEFS
PSFQHRENGLECQRPKRQNSSDDIEVLSTGTPLQQESPELYRKGTTPSDLTPEDSPLQSF
PASPSSTPPLGSCRNKSAHFSRQVSVDEERGGEIQMLLEGRGGDYLRPNSWSEEKVGGTR
GVRSGALRSGQLGSASVAEDYRGRSGGHKHSASNHKQRERWTDSPATVSWTSHHRSHNHS
SGSSKLLELDEEKMSNYEMEMKPLMRMDSYMQEIHTQKRHYSKGGPCRSMADDHRGEERG
FGVQRLRSKSQNKENFRPASSAEPTVQKLENLRFGDKAEPRLLRWDLTFSPPQKSLPVAL
ESEEDNGDALKSSTGSAPILVVMVILLNIGVAILFINFFI
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtgggggaaggtttaattttgacgatggagggtcgtactgtggaggctgggag
gacggaaaggctcatggccacggaatctgtaccggcccgaagggtcaaggtgaatattcg
ggctcctggagtcacggctttgaggtgctgggggtctacacttggcccagcggcaacact
taccagggcacctgggcgcagggcaagcgccatggcattggcatggagagcaaggggaag
tgggtgtacaaaggcgagtggacccatggatttaagggacggtacggggtccgagaatgc
actggaaacggggccaagtacgaaggcacctggagcaatggattacaggatggctacggg
acagagacctactcggatggagggacgtaccagggccagtgggttggagggatgcgccag
gggtacggcgtccggcagagcgttccctacggcatggctgcggtcatcaggtcacccctg
aggacgtccatcaactccctgcgcagcgagcacaccaacggcacggcgctgcaccccgac
tcctcgccggcggtggccggcagccccgccgtgtcccggggcggcttcgtcctcatggcc
cacagcgacgccgagatcctcaagagcaagaagaagggcatcttccgtcggtcgctgctg
agcgggctcaagctccgtaagtctgagtccaagagctccttggccagccagcggagcaag
cagagctcgttccggagcgaggccgggatgagcacggtcagctccaccgccagcgacatc
aactccaccatcagcctgggcgaaggcgaggccgagctctccgtcatcgaggacgacatc
gatgccaccaccaccgagatctacgtgggcgagtggaagaacgacaagcggtcgggcttc
ggggtgagccagcgctcggacgggctgaagtacgagggcgagtgggccaacaacaagcgc
cacggctacggctgcatgaccttccccgacggcaccaaggaggagggcaagtacaagcag
aacgtcctggtcagcggcaagaggaagaacctcatcccgctgcgggccagcaagatccgc
gagaaggtggatcgggccgtggaggcggccgagcgggcggccaccatcgccaagcagaaa
gcggagatcgcggcctccaggacctcccactcccgggccaaggcggaggcggccgtgacg
gcggcgcagaaagcccaggaggaagcgcgcatcgccaggatcactgccaaagagttttcg
ccttccttccagcacagggaaaacgggctcgaatgccagaggcccaagcgccagaactcg
agcgacgacattgaggtcctctccaccggcacgccgctgcagcaagagagccccgagctg
tacaggaaagggacgacgccgtccgacctgacccccgaggacagcccgctgcagagcttc
cccgccagcccctcgtccacgccgccgctgggctcctgcaggaacaagagcgcgcacttc
tcccggcaggtctcggtggacgaagagcggggcggggagatccagatgctgctggagggg
cgcggcggggactacctgcgccccaacagctggagcgaagagaaggtcggcgggacgcgc
ggcgtgcgaagcggggcgctgcgcagcggccagctggggtcggcctccgtcgctgaagac
taccgaggccggagcggagggcacaaacactcggcctccaaccacaagcaaagagagagg
tggacagattccccggccacggtttcttggacttcccaccacaggtcccacaaccacagc
tcagggagctccaagctgcttgagctagacgaggagaagatgagcaactacgagatggag
atgaagcccctcatgaggatggattcttatatgcaagagattcacacccaaaaaagacac
tatagcaaagggggaccctgcaggagcatggctgatgaccaccgcggggaagagcggggc
ttcggggttcagagactgaggtctaagtcccagaacaaagagaatttcaggccagcttcc
tctgccgagcccacggtgcagaaactggaaaacctgagattcggggacaaagctgagcct
cggctactaaggtgggacttaaccttctccccgccacagaaatccttacctgttgcacta
gaatctgaagaggacaatggggatgcgctcaaatccagtacgggctcagctcccattctg
gtagtcatggtgatcttactaaatatcggagtcgccattttgtttattaactttttcatc
taa
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