Oxyura jamaicensis (ruddy duck): 118172798
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Entry
118172798 CDS
T11549
Symbol
RFWD3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
oja Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oja04121
]
118172798 (RFWD3)
Enzymes [BR:
oja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118172798 (RFWD3)
Ubiquitin system [BR:
oja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118172798 (RFWD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4_2
zf-C3HC4
Beta-prop_WDR5
zf-RING_UBOX
WD40_CDC20-Fz
Beta-prop_THOC3
WDR55
EIF3I
zf-rbx1
Beta-prop_WDR3_1st
zf-RING_5
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Rtf2
zf-RING_11
Myo5a
Nairovirus_Gn
zf-RING_Vps41
WD40_WDHD1_1st
zf-UDP
zf-C3HC4_4
Beta-prop_RIG_2nd
WD40_Prp19
NBCH_WD40
WD40_2
Beta-prop_WDR36-Utp21_2nd
zf-Nse
Beta-prop_ACSF4
DUF7837
Beta-prop_RSE1_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
118172798
NCBI-ProteinID:
XP_035192827
LinkDB
All DBs
Position
11:complement(join(1605153..1605296,1606135..1606352,1606605..1606819,1607710..1607886,1609909..1610059,1611272..1611500,1616277..1616391,1618555..1618646,1620810..1621007,1621104..1621192,1622936..1623165,1624569..1624927))
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AA seq
738 aa
AA seq
DB search
MAQEEMEVDLQPVADYPAENHRALPSEPTSGHTAVLSSEGGSVTIISDDEDEAVGALSTG
TGQAAAGPDRPANPSGLQRFPGAFDQLPLVPGPQAAPRPRVRRARRQQRIGGSQRVISAR
APLDSYFQISRSQEQATTPAARLEPSRVAGSSQEDGSAETELSGSASSTSEEEEEELEAA
APPSPAAQETPAAASSVSTQAQAELPQASAGHGSYEDEGAEVQQKQRTPLKQPEPSVPVA
PLEEEEGDTCTICFEQWTNAGDHRLSALRCGHLFGYTCIERWLRGQAGKCPQCNKKAKRS
DIVVLYARTLKALDTSEQERMKRSIEKEQMLRRQAELESAQSRLQLQVLTDECSKLRRQV
QELKALVAQHSVSASQQPGSFRTGFPGGLPSSQSQRKYHLEKVFVVSQAGNCRVMAYCDS
LGCLVVSQPSPQSTFIPGCGVKMMSVANLKSSQYIPIHSKQIRGLAFGSRADGLLLSAAL
DNTLKLTSLATNTVVQTYNTGRPVWSCCWCLDDTNYIYAGLVNGSIMIYDLRDTNSHVQE
LVPQKSRCPMVSLSYLPRMASASLPYGGILAGTLEGACFWEQKAGNSYRPHHLLLEPGGC
IDIQTEISTRHCLATYRPSKNNPCVRCVMMELTCSPLTEASEDVVCSSNPVQTFSAGPTC
KLLTKNAIFQSPEEDGSIFVCAGDEASNSAMLWDAGSGSLLQKLQADLPVLDICPLEVNQ
THLLATLTEKMVNIYKWQ
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagaagagatggaagtcgacctccaaccagtggctgattaccccgcagagaac
cacagggcgcttccctcggagcccacctcaggccacaccgcggtgctcagcagcgaagga
ggcagcgtgactatcatttctgacgacgaggatgaggctgttggtgcattgagcactggg
acagggcaagcagctgccgggcccgaccggccggcaaatcccagcggactgcagaggttt
ccgggggccttcgatcagctcccgctggtgcctgggccacaagctgcgccacggccacga
gtgagaagggctcgcaggcagcagaggatcgggggctcccagagggtgatcagtgccagg
gcaccgttggacagttacttccaaatcagcaggagccaggagcaagctacgacaccagct
gcacgtctggagccctcgcgtgtcgcggggagcagccaggaagatgggtctgctgaaaca
gagctgagtggctctgccagcagcacttctgaggaggaggaggaagagctggaggctgca
gcaccgccgtccccagcagcacaggagacgcctgcagcagccagctcagtttccactcag
gcccaagcagagctgcctcaagcttctgcaggacatggaagttatgaagatgaaggggct
gaagtccagcaaaagcagagaactccactaaagcagccagagccctcggttcctgttgcc
ccgctggaggaggaggagggggatacctgtaccatctgttttgagcagtggaccaacgct
ggggaccaccgcctgtcggcgctgcgctgcgggcacctctttggttacacctgcattgag
aggtggctcagggggcaggcggggaagtgcccccagtgcaataagaaggcaaaacgctct
gacattgtggtgctgtacgcccgcactctgaaggcactggacaccagcgagcaggaacgc
atgaagagatctatagaaaaggagcaaatgttgcggagacaggccgagctggagtctgca
cagagccgtctccagttgcaggttctgacagacgaatgcagcaagctccgcaggcaagtt
caggaactgaaggctctggtggcccagcacagtgtgagtgcttctcagcaacctggcagc
ttccgcaccggcttcccaggtggcctcccctccagccaaagccagcgcaagtaccacttg
gaaaaggtcttcgtggtgtctcaggctgggaattgcagagtgatggcatactgcgactcg
ctgggctgtctcgtggtgtcacagccttctccacagtctacttttattcctggctgtggc
gttaagatgatgagtgtggccaacctgaagagcagtcagtacatccccatccacagcaaa
cagatccgggggctggctttcggcagccgtgcggacggcttgctgctgtctgccgctctg
gacaacactctcaaactgaccagcttggcaacaaacaccgtggtacagacatacaatact
ggccgtcctgtctggagctgctgctggtgtctcgatgacacaaattacatctacgctggg
ttggtcaacggctccatcatgatctatgacttgagagacaccaactcccacgtccaggaa
ctggtccctcagaagtccaggtgccccatggtgtcgctgtcttacctgccccgcatggcc
tcggcctcgttgccttacggagggatactggctgggaccttggaaggagcctgtttttgg
gaacagaaggctggcaactcctaccggccccatcacctgctgctggaaccaggaggatgc
attgatattcagactgagatcagcacgcggcactgcctcgcaacctacaggcccagtaaa
aacaacccgtgtgtgcgttgtgtcatgatggaactgacctgcagccccctgacggaagcc
tcggaagacgtggtgtgttcttctaacccggtgcagaccttcagtgctgggcccacctgc
aagctgctgaccaagaacgccatttttcagagcccggaggaggatggcagcatcttcgtg
tgcgctggcgatgaggcatctaattctgccatgctctgggatgccggcagtggctccttg
ctgcagaagctgcaggctgacctgcccgtgctggacatctgccccttggaggtgaaccaa
acccacctgctggccacgctcaccgagaagatggtgaacatctacaagtggcagtga
DBGET
integrated database retrieval system
