KEGG   Oxyura jamaicensis (ruddy duck): 118172804
Entry
118172804         CDS       T11549                                 
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
  KO
K14438  chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
oja  Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:oja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oja03036]
    118172804 (CHD9)
Chromosome and associated proteins [BR:oja03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    118172804 (CHD9)
SSDB
Other DBs
NCBI-GeneID: 118172804
NCBI-ProteinID: XP_035192835
LinkDB
Position
11:complement(join(4733624..4734481,4736692..4736796,4739035..4739163,4739931..4740152,4740640..4740779,4741615..4741783,4742584..4742856,4743725..4743888,4745863..4746768,4747036..4747238,4747372..4747591,4747748..4747790,4748082..4748139,4748791..4748908,4749026..4749129,4750053..4750142,4751083..4751242,4751738..4751937,4753209..4753405,4754056..4754166,4755642..4755821,4756408..4756575,4757232..4757427,4759454..4759664,4760456..4760711,4761361..4761504,4762272..4762448,4763564..4763807,4765126..4765247,4767384..4767521,4768234..4768320,4768848..4768965,4769541..4769596,4769684..4769752,4771175..4771321,4774778..4774889,4784029..4784366,4806949..4808385))
AA seq 2889 aa
MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDAQ
NQQKISEFEPLNQYDSLKLHQVSTSFNSSADNVLSPHSQFNCSPIHPQTQSNGMFPDVAD
GSPMWGHQTATTVSNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEPQHQCASLRSQQ
SRNNTGQDALSQPKDFLEVNVSTSHRVNVNHPPPVSNPSTSQQPLSVQQFSQTASASIHF
CGNQEGTFDGQSPTITPCSVNNSQQFSSPYSYSNNHISPTSLLQPTTALSSSQQTHPISD
FTGSDAFTSQTGTKQETTEHMLNPNTPLNSSSFQMLHSAHPQGNFSSSKLSPVNINFPAS
AGSASQISHFTDPIESNGFTSLDDNLLHQVEAPNEPFTGLDPDDLLQEDLLPQFDDSAFV
QDSTSHVLEHDLEHHISPHQVTQASDIGRAQSQSHIHPWHSAVSSQHLQERSRITLQGQP
PSSKKTDGSGSYTKLQNTQVRAMSEKKQKKKADSESKQEKANRIISEAIAKAKERGERNI
PRVMSPENFPSVSAEGKEEKKGRKVKTKPKDKETKKPKTGSSTKIKEKTKIGKLIITLGK
KQKRKNESSDELSDAKQTPQRPLKDEDSQKRRSNRQVKRKKYAEEGEGKQSEEEAKVSVK
IKKNSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRIIKKEISAGMTVETEEFFVKYKNY
SYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLEVSL
CEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPPN
SWKKIEHSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEIL
LSGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIV
RGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVL
LTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLK
EDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKC
CNHPYLIKGAEEKILGEFKETYSPSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLI
FSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL
GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLK
LGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQIL
QRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSL
VIDTPRIRKQTRPFSATKDELAELSEVESEGEDKPKLRRPCDRSNGYGRTECFRVEKNLL
VYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDG
QTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHH
CNKVLLRVRMLYYLKQEVIGNEFQKVFEGIDASEIDVWVPEPDHSEVPAEWWDADADKSL
LIGVFKHGYEKYNTIRADPALCFLERVGKPDDKAVAAEQRANDYIDGDVEDPEYKPAPAM
FKDDIEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQQ
IQPAFPIQTSMMQTPYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPERGR
FDWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITEERASR
TLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRTD
YHILRDPELSFMSAQRNYSQNKVALSRTSTPLLHQYQMALAASPLTPQSRLPDAKVNALE
DAKVKNENLKEDAQSSEEESMSTEETQTIMKSEPLSPKNGTPVQNTDHRPSVKTETDRRM
VAARTEPLTPNPASKKQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSHSRSG
SSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEAQKRAEGTAHIKAYDEESVAS
LSTTQDETQDSFQMNNGTPNSSYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWPS
ARRNYDSNTVASFYTTKLLDSPGAAADYSEPSAPTPPLAGVKEEYDQSPQMSKVKKHVRE
KEFTVKINDEGGLKLTFQKQGLSQKRPFESEEGALGQQQYLARLRELQNASETSLVNFPK
SLPESGTSSHLTASANGVIVDSQPVVKKRRGRRKNVEGVDVLFINRNKQPNHVNPGINSC
QVAAGINPALTYTQSQGMLDAESPVPVINLKDGTRLAGDDAPKRKDLERWLKEHPGYVED
LGACIPRTQLHDGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLKD
LCRFLKENPEYGVAPEWGDVVKQSGFLPEVMFDRILTGPVVREEVSRRGRRPKSEIAKAT
AAAAAATAASVSVNPLLANGLLPGVDLPSLQALQQNLQNLQSLQVTAGLMGMPAGLTTGG
DAKNMAAMFPMLLSGMAGLPNLLGMGGLLTKSTESISEDKKGNDSKEADIKKERTEDQNT
DTGGENSVSSSPSTSSAAANPLSLNPLLLSNILYPGMLLTPGLNLHIPALSQSNVFDVQN
SESNDTGSAKPTEEKEENSRVRDQEDKGGTEPSSHNENSTDEGSEKADASSGSDSTSSSS
EDSDSSDED
NT seq 8670 nt   +upstreamnt  +downstreamnt
atgactgatcctatgatggatttttttgatgatgccaatctttttagtgagaccttagaa
ggtttgtcagatgatgcctttgttcaacctggacctgtttcacttgttgatgaattgaat
ttaggtgcagaatttgaacctttgcacatagactccttgaaccatgtgcaagatgctcag
aatcaacagaagataagtgagtttgagccgctgaatcagtatgattctctgaaacttcac
caagtaagtacgtctttcaatagctcagcagacaacgtcttatcgccacactctcaattc
aattgttcaccaattcatccacaaacccagtctaatgggatgtttccagatgtggctgat
ggtagtcctatgtggggtcaccaaactgccacgactgtttcgaatcaaaatgggtccccc
tttcaccaaggacattctcagtctatgcagcaaaataaaagctttgtagcacaccatgac
tttgccttatttcaggctaatgaaccgcagcatcagtgtgcctcactacgatctcaacaa
agcaggaataacacggggcaagatgctctgagtcagccaaaagacttcctggaagttaat
gtatctacttctcacagagtcaatgttaaccacccacctccagtttctaatccttcgact
tcacagcagcctctgtctgttcaacagttttctcaaactgcaagtgcttcaatacatttt
tgtgggaatcaagaaggaacttttgatggacagtccccaactattactccgtgttctgtc
aataacagccaacaattttcatctccgtattcgtactctaataaccacatttctcctacc
agccttcttcagcctacaacagctctttctagtagccagcagacacaccctatttctgac
ttcactggaagcgatgcctttacatctcaaacagggaccaagcaagaaacaaccgagcac
atgttgaatcctaatacacctttgaattcaagtagttttcaaatgttgcattctgcgcat
cctcagggcaactttagtagttcaaaactttctcctgtgaatattaattttccagcctct
gctggttctgcttctcagataagccatttcacagaccctattgagagcaatggttttacg
tctttggatgacaacttgcttcatcaagttgaggctccaaacgaaccgtttacaggactt
gacccagatgacctccttcaggaagaccttctgccacagtttgatgactctgcgtttgtt
caggatagcacaagccatgttttagagcatgacctagaacaccatataagcccccatcaa
gtaacacaggcatctgatattggtcgggcacagtcgcaaagtcacattcatccctggcat
tctgcagtttccagtcagcatctgcaagagagaagtcgtataaccttacaaggacagcct
ccttcctccaagaagactgatggttcaggatcatatactaagttgcagaatacccaggtg
agggcaatgtctgaaaagaagcagaagaaaaaagcagactctgaaagtaaacaagagaag
gcaaatcgcataatatctgaagcaattgcaaaagcaaaagagagaggggagagaaacatt
ccacgagtaatgagtcctgaaaacttccccagtgtttcagctgaaggaaaagaggaaaag
aaaggtagaaaagttaaaaccaaacccaaggacaaggagaccaaaaaaccaaaaacgggt
tcctcaaccaaaattaaagagaaaacaaaaattgggaagctaatcatcacgctgggtaag
aagcagaaaagaaaaaatgaatcctcagatgaattgtctgatgctaagcagactccgcag
cggccactgaaagatgaagattcacagaagagaagatcaaatcgtcaagttaaacggaaa
aagtatgctgaagaaggagaaggaaagcaatcagaagaagaagcgaaagtttctgtgaaa
atcaaaaagaattcagctcctttacctgctgaacaacctttacaattatttgtggagaat
ccaagtgaagaggatgcagcaattgtagacaaaatcttatcctctaggataataaagaaa
gaaatatctgctgggatgactgtagaaacagaagagttttttgtaaaatacaagaactac
tcttatctccactgtgagtgggccacagaacagcagcttttaaaggataagagaatccag
cagaaaataaaacggttcaaactaaggcaagcacaaagagctcacttttttgcagatatg
gaagaagaaccttttaatcctgactatgttgaagtagaccgggtattagaagtctctctt
tgtgaagataaagatactggtgagcctgttatttactatttagtaaaatggtgttcattg
ccatatgaagacagtacgtgggagctgaaagaagatgtagatcaagcaaaaatagaagaa
tttgaacaattgcaagcttctaggcctgactcaaggagattggaccgaccgcctccaaac
tcctggaagaagatagaacactccagggaatataaaaatggcaatcagctcagggaatat
caactggaaggacttaactggctcctattcaactggtacaacaggcggaattgcatttta
gcggatgaaatgggtcttggcaaaaccattcagtcaattacattcctctatgaaatcctc
ctgtctggtataagagggccttttctgatcatagctccgctttccactataacaaattgg
gaaagagaatttcgcacatggactgacctcaatgttgtagtgtatcatggaagtatgatc
agcaggcagatgattcagcagtatgaaatgtacttcagggactcccagggacgtattgtt
cgaggtacctaccgattccaagccattatcacaaccttcgaaatgattcttggtggctgt
ccagagctaaatgcaattgaatggcgatgtgttataattgatgaagcacacaggctgaag
aataaaaattgcaaactcttggaaggactaaaattaatgaaccttgagcataaagtgctg
ctaactggtacgccactgcagaatacagtagaagaattatttagtctccttcattttctt
gaaccattgcgttttcctgctgaatctaccttcatgcaagaatttggagaccttaaaaca
gaggaacaggttcagaaactacaagctatcctgaaacccatgatgctcagacggttaaaa
gaagatgtagaaaaaaagctggctcctaaggaggaaactataattgaagtagaactaact
aatattcagaagaaatattaccgagcaattctggagaaaaattttgctttcttatccaaa
ggagcagggcaagcaaatgtaccaaatctggttaacactatgatggaactcagaaaatgt
tgtaatcatccttatctcatcaaaggtgctgaagagaaaatccttggagagtttaaagaa
acttacagcccaagtgcccctgacttccatctacaagcaatgatccagtctgctgggaaa
ttagttcttattgataaactccttccaaaaatgaaagcaggaggccacaaggtccttatc
ttctctcaaatggtgcggtgccttgatattttggaggattaccttatacataaaagatat
ttatatgaacgaattgatggacgagtacgaggtaacctcaggcaagctgcaattgaccgg
ttcagcaaaccagattccgatcgctttgtgttccttctgtgcaccagagctggtggtttg
ggcatcaatttgactgcagcagatacgtgtataatttttgattctgactggaatcctcaa
aatgatctacaggctcaagcccgttgtcacaggattggtcagaacaaagctgtgaaggtc
tacagactgataactcgtaactcatatgaaagagagatgtttgaccgagcaagtctgaaa
ctgggactcgataaggctgtcttacagagtatgagcggaagagaaaacagtgttggtggt
atccaacaactctcaaaaaaagaaatcgaagacttgcttcgacgaggtgcatatggtgcc
ataatggatgaagaagatgaaggctctaaattctgtgaggaagacattgatcaaattttg
cagcgccgtactaaaactattacaattgaatcagaaggaaggggctccacatttgccaag
gctagctttgttgcatctggaaacaggactgatatttcactagatgatcccaacttttgg
cagaaatgggccaaaaaggcagaaatagatatagatgccatcagtggccgaaacagcctg
gttattgataccccaagaattagaaaacaaacaaggcccttcagtgctacgaaagatgag
ctggctgaattgtctgaagtggagagtgagggtgaggataaaccaaaactccgcaggccg
tgtgaccgttccaatggatatggaagaacagagtgttttcgggtggaaaaaaacctactg
gtctatgggtggggtcgctggagagagattttgtcacacggtcgcttcaagaggcagcta
aatgaacaggatgtggagataatttgccgagctctcttagcctactgccttgttcactac
agaggggatgagaaaataaaaagttttatatgggatctcattaccccaacagaagatggg
caaacacgagagctgcagaatcaccttggcctttcagcccctgtgcctagaggaagaaaa
ggaaaaaaagtgaagacccaggctagcacttttgacatacacaaagcagaatggcttcga
aaatacaatccagaacatctattgcaagatgaaggatacaaaaagcacataaaacaccac
tgcaacaaggtcttgcttcgagtaagaatgctgtattacctaaaacaagaagtcattggt
aatgaattccaaaaggtcttcgaaggaattgatgccagtgaaattgatgtttgggtccct
gagccagatcattcagaagttcctgctgagtggtgggatgcagatgcagataaatccctt
ctaatcggagtttttaaacatggttatgaaaaatataacactatcagagcagacccagca
ctgtgcttcttggaaagggttggcaagccagatgataaagcggttgctgctgagcagagg
gcaaatgattatattgatggggacgtagaagatccggaatataaaccagcaccagcaatg
tttaaagatgacatagaggatgatgtttcatctccgggtgatttggtaatagcagatgga
gatggacaaatgatggaaggagacaaaatctattggcccacccagtctgccttaacaaca
cgtcttcggcgcctaataacagcttatcaacgaaccagtaaaaataggcaggcccagcag
atccagccagcattcccaatacaaactagtatgatgcagactccgtacgaagaagctgct
ctaaacccaaagatggctgctaagatagaaagacagcaaaggtggacaagaagagaagaa
gctgatttctacagagttgtgtccacatttggagtggtatttgatcctgaacggggacga
tttgattggaccaaatttagagcaatggctaggctacataagaaaactgatgagagctta
gaaaagtacctgtatgcttttatgtcaatgtgcaggagggtctgtcgtctcccctcaaaa
gaagaacttgtagacccaaacatttttatccaaccgattacagaggagcgtgcttcccgg
actttgtatcgcattgagctcctaaggaaggtgcgagaacaggcccttagacacccccag
ctgtttgagcgactaaagctatgtcagccaaacccagacttacctgtctggtgggagtgt
gggactcacgacagggatttgcttattggagctgctaaacatggagttagcaggacagat
tatcatatccttcgtgatcctgaactgtcgtttatgtctgcccagaggaactatagtcag
aacaaagtggcgctctcaaggacttctactccgctcttgcatcagtaccagatggcatta
gctgcttctcctcttacaccgcagtcaagattgccagatgctaaagtgaatgctctcgag
gatgcaaaagttaaaaatgagaatctgaaagaggatgctcagtcttctgaagaggaatct
atgtctacagaggagacacagacgataatgaaatctgaacctctgagtccaaaaaacggc
acaccagtacaaaatacagaccacagacctagtgtgaagacagaaacagacaggcgcatg
gtggcagcaaggacagagcctctaactccaaacccagcttccaaaaaacagagagtcagc
aaaagaggatctgactctagctctgactcagactctgactcagatagatcatcctgttct
tccaggtcatcttcgtcatcctcttcgtcttcctcatcttgttcacactctcgatcaggc
tctagttcttcttcatcttcatcttgttcttcagcatcttcatcctcatcatcttcatcc
tcctcttcctcgtcgtcgtcatcatcatcatctgaagagagtgatagtgaagaggaggca
caaaaacgtgcagaaggaactgctcatataaaagcatatgatgaagaaagtgtagcttct
ctgagtacaacgcaagatgagacacaagacagtttccagatgaacaatgggacaccaaat
tccagttacctcctacaaggtggctacatgttggcagcatcctattggccaaaggatcga
gttatgattaaccggcttgatagtatttgtcaaacagtgttgaaaggtaaatggccttca
gcaagaaggaactatgacagcaatacggtggcatctttctacacaaccaaacttctggat
agtccgggtgcagctgcagattacagtgagcccagtgcaccaacaccccctcttgcaggt
gttaaagaagaatatgatcagtcaccacagatgtcaaaggtgaagaagcatgtacgagaa
aaggagtttacagtgaaaatcaatgacgaaggtggtttgaaattgacttttcagaagcag
ggactgtctcagaaaaggccatttgaaagcgaggaaggtgcattgggacagcagcaatac
ctggctcggctacgtgaactccagaacgcttcagaaaccagcctcgtcaacttcccaaaa
tcacttcctgaatcgggtacttccagtcacttaacagccagcgccaatggagtgatagtt
gacagtcagcctgtagtcaaaaagagaagaggaagaaggaagaatgtggaaggagttgat
gtcctctttataaatagaaataagcagcctaaccatgttaatccaggtattaactcctgt
caagttgctgcaggaataaacccagcactcacctacacgcagtcacaaggcatgcttgat
gcagagagtccagttcctgttattaacctaaaagatggaacaaggcttgcaggtgatgat
gcccccaaaagaaaagatttagaaaggtggctgaaagaacatcctggctatgttgaagat
ttaggagcttgtattcctaggacacagctgcatgatgggaggcccaaacaaaaaagacat
cgttgtcgaaaccctaataaactggatgtcaatagtttgactggtgaagaacgtgttcag
ctcataaatagaagaaatgcaagaaaggtggggggtgcatttgctccccctctgaaggat
ttgtgcaggttcttgaaagaaaatccagagtatggagtggctcctgaatggggagatgtt
gtaaaacagtctggatttctcccagaagttatgtttgaccgtattctcactgggcctgtt
gtgcgggaagaagtaagccggaggggaaggcgcccgaaaagcgagattgctaaggcaaca
gcagctgcagccgctgccactgctgcgagcgtgtcggttaaccctctgctagctaacgga
ttgctgccaggagtggatctgcctagtcttcaggccttacaacaaaacctgcaaaacctg
cagtcgctgcaagtaacggcgggactcatgggaatgccagctggcttaactactggagga
gacgccaagaacatggccgccatgttccccatgctgctgtcagggatggctggattacca
aacctgctgggcatgggaggacttctaaccaagtctacagaatctatttcagaggataaa
aagggaaacgattcaaaagaggcagatataaagaaagaaaggacagaagaccaaaataca
gatactggtggtgaaaactctgtttcgagctctccttcgacatcctctgcagctgccaat
cctctctctcttaacccattacttttgtccaacatactttatccagggatgcttctcact
ccaggccttaatcttcatatcccagctttgtctcagtctaatgtttttgatgtacagaac
agtgaaagtaatgacacaggctcagccaagcccacagaagaaaaggaggaaaattctagg
gttagagatcaggaagacaaagggggaacagagccaagctctcacaatgaaaacagcaca
gatgagggttcagagaaagcagatgcttcatctggatctgatagtacatcatcttcatct
gaggattcagattctagtgatgaagactga

DBGET integrated database retrieval system