KEGG   Oxyura jamaicensis (ruddy duck): 118173198
Entry
118173198         CDS       T11549                                 
Symbol
NEDD1
Name
(RefSeq) protein NEDD1
  KO
K16547  protein NEDD1
Organism
oja  Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:oja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oja03036]
    118173198 (NEDD1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oja04812]
    118173198 (NEDD1)
Chromosome and associated proteins [BR:oja03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     118173198 (NEDD1)
   Microtubules and associated factors
    gamma-tubulin ring complex
     118173198 (NEDD1)
Cytoskeleton proteins [BR:oja04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     118173198 (NEDD1)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40 Beta-prop_WDR36-Utp21_1st WD40_WDHD1_1st WDR55 Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WD40_RFWD3 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_VPS8 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N WD_LRWD1 Beta-prop_Aladin Beta-prop_DCAF4 KNTC1_N WD40_like
Other DBs
NCBI-GeneID: 118173198
NCBI-ProteinID: XP_035193435
LinkDB
Position
1:complement(join(45661607..45661711,45662400..45662466,45664530..45664686,45664981..45665137,45667278..45667501,45667990..45668037,45668198..45668329,45671168..45671354,45672309..45672510,45673496..45673725,45679147..45679287,45680475..45680591,45682058..45682152,45683900..45684035))
AA seq 665 aa
MQEGVRFASAGDDVKIWDSSSITVVEQFNPHTSPHLVSSLCWASNNSFLVTASAVGDKIV
VSSCKSKPVPLFEIAEGAKQTCVSLNSSSLYIASGGLDNTVNIWDLKSRRIHRSLKDHKD
EVTCVTYNWNDCYIASGSLSGEIILHSVTTNLSSTPFGYGSRQPIRHLKYSSFKKSLLGS
VSDSGNVTLWDVNSQNPYHNFENTHKAPASEICFSPVNELLLVTVGLDKRIILYDTSSKK
LLTTIVADFPLTTVDFMPDGTTLAIGCSRGKICQYDLRKMTSPVKTVIAHKGCVKCIRLQ
FSSTFSKSNLKGSSNKPVSKRIEVKAGSNLGAIQNIGIKNLASQTSATVSSPLTASNENK
GGEFLQEKTGFPRSSSLDVIPSKETDHGKSADLNNFDDLGRNSLGDVFSPVRDDIIACKA
NEDPPGKGDGLDFQSYLSGLDFLPQLTTAFPVKRNPVGSNAQGIRSSPLHALVGSPIKEE
EEHPETDTKKTNLGKQESKESLKQLSKLNSASAESGTLSPPPPTTASKTPETNERLVKNT
QPHLARDLPLNGTTSTSPKITSPVTAGVASSLSEKIVETIGSSRLNAPLTSIQINFIQNM
IQETMDDFREACHRDIVNLQVEMIKQFHVQLNEMHALLERYSVNESLVAEIERLREENKR
LRTHF
NT seq 1998 nt   +upstreamnt  +downstreamnt
atgcaagaaggcgtacgttttgcttcagctggagacgatgttaaaatatgggattcctcg
tctataacggtggtggagcagttcaacccgcatacatccccacatctagtcagctcactc
tgttgggccagcaataatagcttcctggtcactgcttctgctgttggtgataaaatagtt
gtttcaagctgtaaaagtaaacctgttccactttttgaaatagctgaaggagcaaaacag
acgtgtgtgagcttaaattctagttccctgtatattgcaagtggaggcctcgataatact
gttaatatctgggatctcaaatctagaaggattcaccgtagccttaaggatcataaagat
gaagttacatgcgttacatataattggaacgactgttacattgcttctgggtctttgagt
ggtgaaatcattctacacagtgttaccaccaatttatcaagtactccctttggctatggc
agccgtcagcctattcgacacttgaagtactcatcctttaagaaatccttgttgggcagt
gtttctgacagtggaaatgtaaccctgtgggatgtaaatagtcagaacccatatcataat
tttgaaaatactcataaagcaccagcttcagaaatctgcttttctccagtcaatgagttg
ctgcttgtaactgtaggtctggataaaagaattattctctatgatacttcaagtaaaaaa
ttacttacaactatagtagcagattttcctctgacaacagtggacttcatgcctgatggt
actactttggctataggatgctcccggggaaaaatctgccagtatgacttaagaaaaatg
acatcaccagtgaaaacagttattgctcacaaaggttgtgtgaaatgcatacgtcttcag
ttcagtagcactttttccaagtccaaccttaagggttcttcaaataagcctgtatccaaa
agaatagaagtcaaagctggtagtaatcttggagcaattcaaaatattggcataaaaaat
ctagcttctcagacatcagcaacagtttcatcccctctgacagcatcaaatgagaataag
ggaggagagtttcttcaggagaaaacaggctttccccgtagcagcagcttggatgtgatt
ccatctaaagaaacagatcatgggaaaagtgcggacttaaataattttgatgacttgggt
cgaaatagtttaggagatgtgttttctcccgtcagagatgatattatcgcgtgtaaagca
aatgaagatcctccaggaaaaggagatggtctggattttcagtcctacctttcaggtttg
gattttctcccacagctcaccactgcctttccagtaaaaagaaatcctgtaggcagtaat
gcacaagggatacggtctagcccactacatgcacttgtgggatctccaattaaggaagaa
gaagaacatcccgagactgacaccaagaaaacaaatcttggaaaacaagaatctaaagaa
tccttaaaacagctttccaagttgaactcagcaagtgcagaatctggaactttaagtcct
ccacctccaaccacggcttcaaagactcccgaaacaaatgagcgactcgtgaagaatact
cagccccatcttgcccgtgatctaccattaaatggtactacctcaacaagtccaaagata
acatcacctgtcactgctggagttgccagctcactgtcagaaaaaatagtagaaacaatt
gggagtagcagactaaatgcacctctgacatcaatccaaataaacttcattcagaacatg
atacaagaaacaatggatgacttcagagaagcatgccaccgagatattgtgaatttgcaa
gtggagatgatcaaacagttccatgtgcagttgaatgaaatgcatgccttacttgaaaga
tactctgtaaatgaaagcttagtagctgaaattgagagactacgagaggaaaacaaaaga
ctgaggactcacttctga

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