KEGG   Oxyura jamaicensis (ruddy duck): 118173239
Entry
118173239         CDS       T11549                                 
Symbol
FANCD2
Name
(RefSeq) Fanconi anemia group D2 protein isoform X1
  KO
K10891  fanconi anemia group D2 protein
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:oja00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    118173239 (FANCD2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oja03400]
    118173239 (FANCD2)
DNA repair and recombination proteins [BR:oja03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FANCD2-I complex
     118173239 (FANCD2)
SSDB
Motif
Pfam: FancD2 FANCI_S2 CCDC53
Other DBs
NCBI-GeneID: 118173239
NCBI-ProteinID: XP_035193529
LinkDB
Position
12:join(6319272..6319338,6320626..6320760,6321711..6321778,6322579..6322682,6324066..6324129,6327561..6327613,6329801..6329879,6330597..6330721,6331535..6331622,6332599..6332703,6333839..6333939,6334418..6334526,6336416..6336451,6336787..6336930,6338029..6338163,6339537..6339668,6341352..6341459,6343410..6343519,6344904..6344964,6345502..6345627,6346960..6347033,6347134..6347274,6348442..6348542,6348849..6348964,6349376..6349484,6351664..6351762,6352728..6352837,6353688..6353834,6355367..6355483,6356208..6356336,6356558..6356673,6357701..6357814,6358379..6358506,6360028..6360127,6361806..6361928,6362588..6362681,6363453..6363524,6365107..6365145,6365790..6365864,6366939..6367013,6369984..6370130,6370663..6370734,6370917..6371033)
AA seq 1454 aa
MVSKRKLSKPDVSGENSKPDLPKTKKSRASDKEKASAQGGLESEGVFEELLRTSGIILKA
GEGQNEIAVDQMAFQKKLRLTLEKHPTYPGVVKQFISGLESHIRDRNQFKNCLLPCAPIR
TEGSRTLVHSYCESLIKLLLGINILQPAVITLLLEKIPEFFFDVVGTFGTNFPRLIVNQF
KWLDSLLDSQDLVKKLMQMLSVSPVPIQHDIITSLPEILEDSQQSEVARELGCLLKEGRR
LTVPILDALSRLDLDAELLAEVQQSAMTIVPSVKLEDLPVVVKFILHNVKAANAVEVISD
LRKSLDLSSCVLPAQILGSQKKLKSQVQTSSSTSQITTSQNCVKLLFDVIKLAVRFQKDV
SEAWIKAIENISSVSDHKVLDLIVLLLIHSTNTKNRKQAEKVLRSKIRQGCMPEQLMQNA
FQNHSMVIRDFFPSILVLAQTFLHAAHPAIVSFGSCMYKQAFAVFDSYCQQEVVSALVTH
VCSGNEAELDIALDVLTDLVIVHTSLLMRYATFVKTILDSTQKLNPCQIRKLFYILSTLA
FSQRQEGSYIQDDMHMVIRKWLSSTVPNHKQMGIIGAVTMIGSVALKRNEGDGGSLERPE
PSFERDGQLSTLLDLVGFCCEQTPEVLALYYDELANLIEKQKGNLDLQLLEEFGKSLVED
FPSDFVVDLSPTVTGSFLFPVKSLYNLDEDESQGAIAINLLPLVSQSELGRVTDGMNNPS
KRVVSPICLSPSFRLLRLYTGEQNNGSLEEIDALLGCPLYLTDLEVEGKIDSLSKQEREF
LCSLLFYALNWFREVVNAFCQQQDAEMKGKVLTRIQNITELQNVLGKCLAATPGYVPPPA
TFDSEAMEGVPGVNAVGPMRKKNGRKKKSDGSKASFADRSQADESSEGNQPDNELSELEK
SASEREAGNPLAQLQSYRPYFRELDLEVFTVLHCGLLTKSILDTEMHTEASEIVQLGPAE
LYFLLEDLCWKLEHVLTPGSTRRVPFLKERGYKDIGFTHLRQRSPKEVAVCVVKLLKPLC
NHMENMHNYFQAVTQNQGVVDEPGVNIQEHQMMSSCYQQLLLTFRLLFAWNGFSQHENTD
LLRSALQVVADRLKPGETEFLLLEELISESFQYLLNFQQSVPSFQCAFILTQLLIAISEK
PMAGWKKEKMALLAKQFLCRSWVKPSGDQEKGSQFNSALHTLLCVYLEHTDNILKAIEEI
SSVGVPELINSAKDGCSSTYPTLSRQTFPVFFRVMIAQLESSVKSIPAGKPSDSSETQLE
KLLRWNIAVRNFHILVNLVKVFDSRPVLNICLKYGRLFVEAFLKLAMPLLDHSFKKHRDD
VQGLLKTLQLSTRQLHHMCGHSKIRQDIGLTNHVPLLKKSLEQFVYRVKAMLAFNHCQEA
FWVGILKNRDLQGEEILSQASEARDSEEDSAESPAEEPSGAAGESGSDGSDQDDEEEEDE
EEEGRGAAGRGPAP
NT seq 4365 nt   +upstreamnt  +downstreamnt
atggtttcgaaacggaaattgtcaaaacctgatgtttctggagagaactcaaaaccagac
ttgccaaaaacaaagaagtcacgggcttctgataaggaaaaggcctctgcccaaggcgga
ctggagagtgagggagtatttgaagagctccttagaacatccggaattatactgaaagct
ggggaagggcagaatgaaatagctgtagatcaaatggctttccagaagaagctccgcctg
actctagagaagcacccgacttacccaggcgttgtgaagcagtttatcagtggattggaa
tctcacatcagggacagaaaccagttcaagaactgccttctgccatgtgctcccatacgg
actgaggggtcaaggactttggtgcactcgtattgtgaaagcctcataaaactgcttctt
ggaattaacatcttacagcctgctgtcataacgctgttgttggaaaagatccctgaattc
ttttttgatgtcgtgggtacatttggaacaaattttccccgtctcattgtcaaccagttt
aaatggcttgatagtcttcttgacagccaggatctcgtcaagaagttgatgcagatgctt
agtgtgtctcctgtaccaattcagcatgatattatcaccagtttacctgagatcctggag
gattcccagcaaagtgaagttgccagagagctcggctgcttactaaaagagggcagacgg
ctgacagttccgattctggatgctctttctcgtttggatcttgatgcagaactccttgct
gaggtgcagcagtctgccatgaccattgtaccttctgtaaaactggaagatttgcctgtg
gtggtaaaattcatcctccataacgtcaaggctgctaacgcagtagaggtgatttctgat
cttcgtaagagcttggatctgtcatcatgtgttctgccagctcagatcctagggtcccag
aagaagcttaaaagccaagtccaaaccagttcttccacgagccaaataaccaccagccag
aattgtgtgaagctactttttgatgtgataaagctagctgtaagatttcagaaagatgtc
tctgaagcttggattaaggctattgagaacatctcatctgtgtctgaccataaggttctg
gatctgatagttttgctgctaatccattctaccaacaccaagaacaggaagcaagctgag
aaggtattgaggagcaaaattcgacagggctgcatgccagaacagctgatgcagaatgcc
ttccagaatcattcaatggttatcagagacttcttcccttcaatcctagtacttgctcag
acatttctgcacgctgcacacccagccatagtctcctttggcagctgcatgtacaaacaa
gcttttgcagtctttgactcttactgccagcaggaggttgtgagtgctttggtgactcac
gtgtgcagtggaaacgaagcagaattggatattgctctggatgttctcactgatttggtg
attgtgcacacatctctgctgatgcgctacgccacctttgtgaagaccattttagactct
acacagaaactgaatccgtgccagatccggaagcttttctacattctcagcacactagca
ttcagccagagacaggaaggaagctatattcaggatgatatgcacatggtgatcaggaaa
tggctctccagcactgttcccaaccacaaacaaatggggattattggtgctgtcaccatg
ataggcagcgtggcattaaaaagaaacgaaggagatggtggttcgctggagagacctgag
ccgagcttcgagcgtgatgggcagctttctacattgctcgaccttgtaggcttctgctgt
gagcaaacaccagaagtcttggcactctactatgatgaacttgccaatttgattgagaag
cagaagggaaatttggacctacagctcctggaggagtttgggaagagtctggtggaggac
tttcccagtgacttcgtggtggatctcagccccacagtgaccggttcgttcttgttccca
gtgaagtccttgtataatctcgatgaagatgaaagtcagggagcaattgctattaacctc
ttacctttggtgtcacagagtgagcttggcagggtcactgatggaatgaataacccaagt
aagagggtagtatcaccaatatgtctatcaccctctttccgattgctcaggctttacact
ggagagcaaaacaatggaagcctggaagagattgatgccttattaggttgccccctgtac
ttgactgatctggaagttgaagggaagatagactctctttccaagcaggaacgggaattt
ctgtgctcgcttctcttctatgcgctcaactggtttcgtgaggttgtaaatgctttctgc
cagcaacaagacgctgagatgaaagggaaggttttgactcgaatacagaacatcacagag
ctgcagaatgtgttgggaaaatgcttggcagcaacccctggctatgtcccaccaccagcc
acttttgattctgaagccatggagggagtaccaggtgttaacgctgttggtcccatgaga
aaaaaaaatggaaggaagaaaaagtctgatggcagcaaagccagctttgcagaccggtct
caagcagatgaaagctctgagggaaaccagcctgataatgagctctctgagctggagaag
agtgcttctgagagagaggcagggaaccctctggcacagctgcagagttatcgcccctac
ttccgagaactagacctggaagtgttcactgtactccactgcgggctgctgacaaagtcc
atcctggacacagagatgcatacagaggctagtgaaattgtgcagctggggcctgctgaa
ctctacttcctcctggaggacctgtgctggaagctggaacatgtgctgactccaggctcc
acaaggagggtgcccttcttaaaggaaagaggctacaaggatattggctttacccacctg
cgtcagagatcccctaaggaagttgctgtgtgtgtagtcaagctgctaaagccactgtgt
aatcacatggagaacatgcacaattacttccaggcagttacacaaaatcagggtgtggta
gacgaaccaggagtgaacatccaggagcaccagatgatgtcgtcttgttaccaacagctg
ctactaacttttcgcttgctgtttgcttggaatggtttttctcagcatgagaatactgac
ttgctaaggtcagctctccaggtagttgcagacaggctgaagccaggagagacggaattt
cttcttcttgaggagctgataagcgaaagtttccagtacctactgaatttccagcagagc
gttcccagcttccagtgtgcgttcatcctcactcagctcctgattgccatctctgagaaa
ccaatggctggctggaagaaagagaaaatggctttgctggcaaagcagttcctctgccgg
tcctgggtgaaacccagtggggaccaagagaaaggcagccagttcaacagcgcgctgcat
actctgctctgtgtctacctagagcacacagataacatcttgaaagctatagaagaaatc
tccagtgtcggtgttcctgaattgatcaactctgccaaagatggatgttcttctacatac
cctacactgagcaggcagacattcccagttttcttcagagtaatgatagctcagctagag
agttcagtgaaaagcatcccagctgggaaaccatcagactcaagtgagactcaactggag
aaactgctgcggtggaacattgctgtgcggaatttccatatccttgttaacttggtcaag
gtatttgacagcaggcctgtactcaacatctgcctgaagtatggacgtctttttgtagaa
gcatttctgaagcttgccatgcctctcctggatcacagctttaaaaaacatagggatgat
gtgcagggtttgctgaaaaccttgcagctgagtaccagacaacttcatcacatgtgtggc
cactccaagattcgccaagatattggactgactaaccatgtgcctttgttgaagaagtca
ctggaacaatttgtataccgagtaaaggcaatgctggcattcaaccactgccaggaggca
ttctgggtgggcatcctcaaaaatcgggatcttcagggagaagagattttgtcgcaagct
tctgaagccagggactccgaggaggactctgcagaaagtcctgccgaggagcccagcggc
gcggcgggcgagagcggctcggacggcagcgaccaagacgacgaagaggaggaggacgag
gaggaggaagggcggggggcggcgggccgcggccctgccccctga

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