KEGG T11549: 118173277

Oxyura jamaicensis (ruddy duck): 118173277

Entry

118173277         CDS       T11549

Symbol

COPG1

Name

(RefSeq) coatomer subunit gamma-1

K17267

coatomer subunit gamma

Organism

oja Oxyura jamaicensis (ruddy duck)

Brite

KEGG Orthology (KO) [BR:oja00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oja04131]
    118173277 (COPG1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oja04147]
    118173277 (COPG1)
Membrane trafficking [BR:oja04131]
Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    118173277 (COPG1)
Exosome [BR:oja04147]
Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118173277 (COPG1)

SSDB

Motif

Pfam:

Adaptin_N COP-gamma_platf Coatomer_g_Cpla HEAT_2 Cnd1 PDS5 HEAT_EZ Tra1_ring DUF8079 MOR2-PAG1_C UNC45-central

Other DBs

NCBI-GeneID:

118173277

NCBI-ProteinID:

XP_035193581

LinkDB

Position

12:join(9902392..9902428,9904949..9905001,9905162..9905242,9906009..9906080,9906525..9906604,9907061..9907136,9907273..9907365,9908585..9908671,9908772..9908929,9909524..9909657,9910406..9910473,9910917..9911105,9911585..9911680,9913169..9913412,9913777..9913852,9914762..9914865,9914973..9915098,9915506..9915574,9915944..9916086,9917082..9917253,9918209..9918306,9919617..9919755,9920718..9920816,9921389..9921519)

AA seq 874 aa
MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH
LGVMEATESFFAMTKLFQSNDPTLRRMCYLTIKEMSSIAEDVIIVTSSLTKDMTGKDDNY
RGPAVRALCQITDSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKTSYDVVKRWVNE
AQEAASSDNIMVQYHALGLLYHVRKNDRLAVNKMLSKFTRHGLKSPFAYCMMIRVASKLL
EEEAGSRDSPLFDFIESCLRNKHEMVVYEAASAIVNLPNCTAKELAPAVSVLQLFCSSPK
AALRYAAVRTLNKVAMKHPSAVTACNLDLENLVTDSNRSIATLAITTLLKTGSESSIDRL
MKQISSFMSEISDEFKVVVVQAINALCQKYPRKHAVLMNFLFTMLREEGGFEYKRAIVDC
IISIIEENSESKETGLSHLCEFIEDCEFTVLATRILHLLGQEGPKTNNPSKYIRFIYNRV
VLEHEEVRAGAVSALAKFGAQNEEMLPSILVLLKRCVMDDDNEVRDRATFYLNVLEQKQK
ALNAGYILNGLTVSIPGLERALHQYTLEPSEKPFDLKSVPLATAPIVEQRAENVPVAVVK
QPEKVAATRQEIFQEQLGAIPEFRGLGPLFKSSPEPVALTELETEYVVRCTKHTFVSHMV
FQFDCTNTLNDQILENVTVQMEPTEGYEVIGYVPAKSLVYNQPGTCYTLVALSEEDPTAV
ACTFSCMMKFTVKDCDPNTGEADDEGYEDEYVLEDLEVTVADHIQRVLKPNFGAAWDEVG
DEFEKEETFTLSAIKTLEEAVSNIVKFLGMQPCERSDKVPDNKNSHTLYLAGVFRGGHDL
LVRSRLVLTDTVTMQVTARSGEELPVDVIMASVG

NT seq 2625 nt +upstreamnt +downstreamnt
atgctgaagaagttcgacaagaaggacgaggagtcgggtgggggttccaacccgttccag
cacctggagaagagtgcagtcttgcaagaggcacgggtgtttaatgagactcccataaac
ccacgaaaatgtgctcacatcctcaccaagattctgtatctcataaaccagggggagcac
cttggtgtcatggaagccaccgaatccttctttgccatgacgaagctgtttcagtccaac
gatccaactcttcgcaggatgtgttacctgactatcaaagagatgtcttctattgcagaa
gatgtgatcattgttactagcagcttaaccaaagacatgaccgggaaggacgacaattat
cgaggtcctgcagtgagagcgctctgtcaaatcaccgatagtaccatgttgcaggccatc
gagcgttacatgaagcaggcgattgttgacaaagtgccaagtgtatccagctctgctctg
gtgtcctccttgcacctgctgaagaccagttacgacgtggtaaaacgctgggtgaacgag
gctcaggaggcagcttccagtgacaacatcatggtgcagtatcatgctctgggcttgctc
taccacgtgcggaagaatgatcgcctggcagtcaacaagatgctcagcaagttcacccgc
catggcctcaagtcgccatttgcctactgcatgatgattcgagtagccagcaagctgctg
gaggaggaggctggcagccgggatagccccctgttcgacttcatcgagagctgcctaaga
aacaagcatgagatggtggtctacgaagctgcttctgccatcgttaacctgcccaactgc
actgccaaggagctggcaccggctgtctcagttttgcagctgttttgcagctccccgaag
gcagcactgagatatgcagccgtccgtaccctcaacaaggtggccatgaaacacccatct
gctgtgactgcctgtaacctagacctggagaacctcgtgacagactccaaccgcagcata
gccaccctggccatcaccacgctgctgaaaaccggcagtgagagcagcattgaccggctc
atgaagcagatctcctctttcatgtcggaaatctcagatgagttcaaagttgtagtagtg
caggccatcaacgcgctgtgtcagaagtaccctcgcaaacacgctgtcctcatgaacttt
cttttcactatgcttcgggaagagggcggctttgagtacaagcgagccattgtggactgc
atcatcagcattattgaggagaactcggagagcaaagagacaggcctgtctcacctctgt
gaattcattgaggactgcgaattcaccgtgctggctactcgtatcctccacctcttgggc
caggaagggcccaaaaccaataacccctccaaatacattcgcttcatctacaacagggtt
gtcctggagcatgaagaagtccgggcaggtgctgtaagtgccctagccaaatttggagcc
cagaacgaggagatgttacccagtatcttggtgttactgaaaaggtgtgtgatggatgat
gacaatgaagtgagagacagagccacgttctacctgaacgttctggagcaaaagcagaaa
gccctcaatgctggctacatcctgaacggtttaacagtgtccatccctggcctggagagg
gctctgcatcagtacaccctggagccctctgaaaaaccctttgatttgaagtccgttcct
ttggcaacagctcctattgttgagcaaagagcagaaaatgtccctgttgctgtagtcaaa
cagccagagaaggtggcagcaacacggcaagaaatattccaagagcaactgggggcaatc
ccagagtttcggggactgggcccgctcttcaagtcttctccagagcctgttgccctgacg
gagctggagacagagtacgtggttcgttgcaccaagcacacgtttgtcagccacatggtg
ttccagtttgactgcacgaacaccctgaacgatcagatcctggagaatgtcacggtgcag
atggagccaacagagggctatgaggtcattggctacgtccctgccaaaagcctggtgtac
aaccagccgggtacctgctacacgctggtggcactgtctgaagaggatccgacagcagtg
gcctgtacgttcagctgcatgatgaagttcactgtcaaagactgcgatcccaacacgggt
gaggcggacgacgagggttacgaggatgagtatgtgcttgaggacctcgaggtaacagtg
gccgatcacatccagcgagttctgaagccaaactttggagcagcgtgggatgaagtgggt
gatgagtttgaaaaggaggaaaccttcactttatctgctattaaaacccttgaagaggcg
gttagtaatattgtgaagttcctggggatgcagccctgtgagcgatcggataaggtgcca
gataacaagaactcccacacgttgtacctggcaggcgtgtttcggggtggccatgacctc
ctggtacgctctcgtctcgtcctgaccgacaccgtgacaatgcaggtcactgcccgcagc
ggagaggagctccctgtggatgtgatcatggcctctgttggataa

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