Oxyura jamaicensis (ruddy duck): 118173365
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Entry
118173365 CDS
T11549
Symbol
PPARG
Name
(RefSeq) peroxisome proliferator-activated receptor gamma
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja03320
PPAR signaling pathway
oja04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118173365 (PPARG)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
118173365 (PPARG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oja03000
]
118173365 (PPARG)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oja03310
]
118173365 (PPARG)
Transcription factors [BR:
oja03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118173365 (PPARG)
Nuclear receptors [BR:
oja03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
118173365 (PPARG)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPARgamma_N
zf-C4
Hormone_recep
Tmemb_55A
Motif
Other DBs
NCBI-GeneID:
118173365
NCBI-ProteinID:
XP_035193764
LinkDB
All DBs
Position
12:complement(join(4294060..4294307,4301241..4301691,4305801..4306000,4314050..4314188,4315945..4316114,4317857..4318076))
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AA seq
475 aa
AA seq
DB search
MVDTEMPFWPINFGISPVDLSAMDDHTHSFDIKPFTTVDFSSISSPHYEDIPLARTDQTS
IDYKYDIKLQDCQSAIKMEPPSPPYFSEKVQLYNKPHEESSNSLMAIECRVCGDKASGFH
YGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAIRF
GRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGKTT
DKSPFVIYDMNSLMMGEDQIKCKHVSPLQEQNKEVAIRIFQRCQFRSVEAVQEITEFAKN
IPGFVNLDLNDQVTLLKYGVHEIIYTLLASLMNKDGVLISDGQGFMTREFLKSLRKPFCD
FMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLK
LNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQIIKKTETDMSLHPLLQEIYKDLY
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggttgacacagaaatgccgttttggcccattaattttggaattagcccagtggatctg
tctgcgatggatgatcacacacattcctttgacataaaaccatttaccactgttgatttt
tcaagcatttcttcaccacactatgaagatattcctcttgcaagaactgatcagacaagc
attgattataaatatgatatcaagctccaggattgccaaagtgcaatcaaaatggagcct
ccttccccaccctatttttcagaaaaagttcagttgtacaataaacctcatgaggagtct
tccaactcccttatggctattgaatgtcgtgtgtgtggggacaaggcctctggatttcat
tatggtgtgcatgcatgtgaaggttgtaagggcttttttcgaagaaccatcagattaaag
ctaatttatgacaggtgtgatcttaattgtcgcatccataaaaaaagcagaaataaatgt
cagtactgcagatttcagaaatgccttgctgttggaatgtcacacaatgccatcaggttt
gggcgaatgccacaagcggagaaggagaagctcctggcagagatttccagcgacatcgac
cagctaaaccctgaatctgctgatctgcgagcacttgccaagcacttgtatgactcatac
ataaagtccttccctctgaccaaagccaaggcgagggcgatcttgacaggaaaaacgaca
gacaaatcaccgtttgttatttatgacatgaactcgttaatgatgggagaagatcagatc
aagtgtaagcatgtgtcaccgctgcaggagcagaacaaagaggtagcaattcgcattttc
cagcgatgtcagtttcgctctgtggaggcagtgcaggagattacagaatttgccaagaac
attccaggttttgtgaatcttgacctgaatgatcaagtaactctcctgaaatacggtgtc
catgagatcatatatactctcctggcttctctgatgaataaagatggagttcttatatct
gatggacaaggtttcatgacacgggagtttctgaagagcctgagaaaacctttttgtgac
tttatggagcccaagtttgagtttgctgtgaagttcaatgcactggaattagatgacagt
gacctggcaatatttatagctgtcattatactaagtggagaccgcccaggtttgttaaat
gtgaagcccattgaagatatacaagacaatctgctgcaagctttggagctccagctaaaa
ctgaatcatccagagtcatcacagctgtttgccaaattgcttcagaaaatgacggacctc
agacagattgtaacggaacacgtgcagctgttgcaaattataaagaaaacggagacagat
atgagtcttcatccactcctacaagaaatctataaagacttgtattaa
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