Oxyura jamaicensis (ruddy duck): 118173574
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Entry
118173574 CDS
T11549
Symbol
GABRB2
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja04080
Neuroactive ligand-receptor interaction
oja04082
Neuroactive ligand signaling
oja04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118173574 (GABRB2)
04082 Neuroactive ligand signaling
118173574 (GABRB2)
04519 Cadherin signaling
118173574 (GABRB2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oja04040
]
118173574 (GABRB2)
Ion channels [BR:
oja04040
]
Ligand-gated channels
GABA-A
118173574 (GABRB2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
118173574
NCBI-ProteinID:
XP_035194163
LinkDB
All DBs
Position
13:complement(join(1088962..1089309,1092823..1092873,1112198..1112442,1113567..1113719,1114908..1115045,1163698..1163780,1195046..1195266,1252279..1252346,1253289..1253380,1253503..1253579))
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AA seq
491 aa
AA seq
DB search
MLRVRKKGYFGIWSFPLIIAVVCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPV
AVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDT
YFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIES
YGYTTDDIEFYWRGGDNAVTGVTKIELPQFSIVDYKLITKNVVFSTGAYPRLSLSFKLKR
NIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIP
YVKAIDMYLMGCFVFVFMALLEYALVNYIFFGRGPQRQKKAAEKAASANNEKLRMDVNKD
RRIIGTYHCPEMYSTKMDTHENILLSTLEIKNEMAASEAVMGLGDPRSTMLAYDTSSIQY
RKAGLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSF
FNIVYWLYYVN
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgctgagagtccggaagaagggttactttgggatttggtccttccctttaataattgcc
gtggtgtgcgctcagagtgtcaatgaccctagtaatatgtcactggtaaaagagaccgtg
gatagactgctgaagggctatgacattcgcttgaggccagattttggaggtcccccagtg
gccgttggcatgaacatagacattgccagtatagatatggtgtcagaagtcaatatggac
tataccttgacaatgtactttcagcaagcatggagagataagaggctgtcgtataatgta
atacctctaaaccttactctggacaatagagtagctgatcagctatgggttcccgatacc
tattttctgaatgacaagaagtcatttgtacatggtgtcactgtgaagaacagaatgatc
cgtttgcatccagatggaacggttctttatggactaagaattacaacaacagctgcttgt
atgatggacctacggagatatccgctggatgaacagaattgcactctggagattgagagc
tatggctatacaacagatgacattgaattttattggcgagggggtgataatgcagtcaca
ggagtgacaaagatcgaactgccgcagttctccattgtagactacaagcttatcaccaag
aatgttgttttctctacaggtgcctacccaaggctgtctctcagctttaaacttaagaga
aacattggttacttcattctacagacctacatgccttctattctgatcactatcctgtcc
tgggtttccttctggattaattatgatgcttcagctgcaagagttgctttaggaatcaca
actgtacttacaatgacaacaattaacacccatcttcgagagactcttcccaaaattcca
tatgtgaaagccattgacatgtatctcatgggatgttttgtcttcgttttcatggctctg
ctggagtatgctttggtcaactacatcttctttggcaggggacctcagcgtcaaaagaaa
gcagcagaaaaagctgccagtgccaacaatgagaagttgcgaatggacgtcaataaggac
agaagaataattggcacatatcattgtccagaaatgtattcaacaaagatggatacacat
gaaaatattttgttgagcacacttgaaattaaaaatgaaatggctgcctctgaggctgtg
atgggacttggggaccctaggagcacaatgctggcctatgacacttcaagcatccagtac
cggaaagctggcttacccagacacagcttcggtcgcaatgccctggagcggcatgtggca
cagaagaaaagtaggctacggagacgtgcatctcaactgaaaattaccatccctgacttg
actgatgtaaatgccatagatagatggtcacgcatattcttccctgttgttttttccttc
ttcaatattgtctattggctttactatgtgaactaa
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integrated database retrieval system
