KEGG   Oxyura jamaicensis (ruddy duck): 118173675
Entry
118173675         CDS       T11549                                 
Symbol
PPFIA2
Name
(RefSeq) liprin-alpha-2 isoform X1
  KO
K26226  liprin-alpha
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:oja00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    118173675 (PPFIA2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oja04131]
    118173675 (PPFIA2)
Membrane trafficking [BR:oja04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    118173675 (PPFIA2)
SSDB
Motif
Pfam: LIP-1 SAM_1 SAM_2 Rod_CreS CC_Bre1 DUF3450
Other DBs
NCBI-GeneID: 118173675
NCBI-ProteinID: XP_035194342
LinkDB
Position
1:join(51762186..51762434,51922717..51922779,51953076..51953177,51960314..51960478,51971449..51971523,51997192..51997308,52011571..52011792,52013557..52013703,52015655..52015789,52023346..52023432,52023858..52023941,52024302..52024433,52025402..52025464,52027191..52027282,52032052..52032187,52032677..52032897,52035469..52035706,52038367..52038396,52039284..52039414,52039940..52040094,52045963..52046056,52054928..52054936,52061867..52061948,52064760..52064960,52067115..52067177,52068600..52068629,52070570..52070745,52071591..52071688,52073592..52073767,52073862..52073930,52074877..52075036,52076635..52076693)
AA seq 1286 aa
MMCEVMPTINEDTPMSQRGSQSSGSDSDSHFEQLMVNMLDERDRLLDTLRETQESLSLAQ
QRLQDVIYDRDSLQRQLNSALPQMTVAAGTSIENNIQRTISCPNEFAALTKELNACREQL
LEKEEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKAL
KSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQNAHIQRKIAAGEGPA
ESEHIEGMEPGQKVHEKRLSNGSIDSNDEASQVVELQELLEKQNYEMAQMKERLAALSSR
VGEVEQEAETARKELIKTEEMNTKYQRDIREAMAQKEDMEERITTLEKRYLSAQRESTSI
HDMNDKLENELANKEAILRQLEDKNRQLQERLELAEQKLQQTMRKAETLPEVEAELAQRI
AALTKSDPTSSTSSDDYQYIMEAKLQEMISIRRKAEERHGNIEERMRHLEAQLEEKNQEL
QRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVLIQESESFRKNL
EESLHDKERLAEEIEKLRSELDQMKLRAGSLIEPTLSRPHLDSSTELRYSVGSLVDSQSD
YRSTKVIRRPRRGRMGVRRDEPKVKSLGDHEWNRTQQIGVLSSHPFESDTEMSDIDDDDR
ETLFSSMDLLSPSGHSDAQTLAMMLQEQLDAINKEIRLIQEEKESTELRAEEIENRVASV
SLEGLNLARVHQGTSITGSVTASSLASSSPPSGHSTPKLTPRSPAREMDRMGVMTLPSDL
RKHRRKIAVVEEDGREDKATIKCETSPPPTPRAIRMTHTLPSSYHNDARSSLPASLEPES
IGLGSVNSSQDSLHKAPKKKGIKSSIGRLFGKKEKARLGQLRGYMETEAAAQESLGLGKL
GTQAEKDRRLKKNISGHELLEEARRKGLPFAQWDGPTVVAWLELWLGMPAWYVAACRANV
KSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAPPTSRTPSGNVWVTHE
EMENLAAPAKTKESEEGSWAQTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARML
DHLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRLNYDRKELEKRREMSQHEIKDVLVWSND
RVIRWIQAIGLREYANNILESGVHGSLIALDENFDYSSLALLLQIPTQNTQARQILEREY
NNLLALGTERRLEESDDKNFRRGPSWRRQFPPREVHGISMMPGSSETLPAGFRLTTTSGQ
SRKMATDVASSRLQRLDSSTVRTYSC
NT seq 3861 nt   +upstreamnt  +downstreamnt
atgatgtgcgaagtgatgcccacgataaacgaggacaccccgatgagtcaacgggggtcc
caaagcagtggctcggactcggattctcactttgagcagctgatggtgaacatgctggat
gaaagggaccgtctccttgatactcttcgggagacacaggaaagcttgtcacttgcacag
caacgcctacaggatgtcatctatgacagagactccctccagcgacagcttaactcagca
ctgcctcagatgacggttgctgctggtacgagcattgagaataacattcaaaggaccata
tcctgccctaatgaatttgctgcactgacaaaagaattaaacgcatgtagggaacagctg
cttgaaaaggaggaggagatttcagaacttaaagctgaaagaaacaacacaagactgtta
ctggagcatttggagtgccttgtctcaagacacgaaaggtcactgaggatgacagtggtg
aaacggcaagcacagtctccttcaggagtttccagtgaagttgaggtcctcaaagctctg
aaatcgctgtttgagcaccacaaggctttggatgaaaaggtaagggagcgactgagggtt
tctttagaaagagtctctgcactggaagaagaactagctgctgctaaccaggagattgta
gctttgcgtgaacaaaatgcacacattcaaaggaaaattgcagctggtgaagggcctgct
gaatcagagcacattgaaggaatggagccagggcaaaaggttcatgaaaagcgtttatca
aatggctccatagactcaaatgatgaagccagtcaagttgttgaactccaggagctactt
gaaaagcagaactatgaaatggcacaaatgaaggaacgtttggctgcactgtcttcccgg
gtgggagaggtagagcaagaagcagagactgccagaaaggagctcattaaaacagaagaa
atgaacactaaatatcagagagacattagagaggcaatggcacaaaaggaagatatggaa
gagagaatcactacgttggagaagcgctacctcagtgcacagagagaatccacctcaata
cacgacatgaatgacaagctggaaaatgaactggcaaacaaggaagccatcctacgtcag
ctggaagacaaaaacagacagctgcaagagcgtctagagctggctgagcagaagctgcag
cagacaatgaggaaggcagaaaccttacctgaagtggaggctgaactggctcagagaatt
gcagctctgactaagtctgatccaacctcttctacctcatctgatgattatcaatatatt
atggaagctaaactacaagaaatgatctccatacgtaggaaggcagaagaaagacatgga
aacattgaagaacgtatgagacacttagaagctcagcttgaagagaagaatcaggaactt
caaagggcaaggcaaagagaaaaaatgaacgaggagcataacaaaagattatcagatact
gtagacagacttttgacagaatccaatgagcgtctgcagctacacttaaaagagagaatg
gcagcacttgaagaaaagaatgttttgatccaggaatctgaaagtttccggaaaaatctg
gaagaatctttacatgacaaggaaagactcgcagaagaaattgagaaactgagatctgaa
ctggatcaaatgaaattgagggctggttctttaattgaacccacattgtcaaggcctcac
cttgactcatcaacagagttgaggtattctgtgggctcactggttgatagccagtctgac
tatcggtcaactaaagtgataaggcgacctaggaggggacggatgggagtacgcagagat
gaaccaaaggtaaaatcacttggagatcatgagtggaataggacacagcagattggcgtt
ttgagcagccatccatttgaaagtgacactgaaatgtctgacattgatgatgatgataga
gaaacacttttcagctccatggaccttctgtcaccaagtggccattccgatgcccagact
ctggccatgatgcttcaggaacagctagatgcaatcaataaagaaatcaggttaatccaa
gaagaaaaagagtcaacagaactgcgtgccgaagagatagagaatagagtggccagtgtg
agtctggaaggcttaaacctagccagagtccaccaaggtacatccattactggatcagtg
acagcatcatcacttgcaagctcatctcctcccagtggacactcaactcctaaactcaca
cctcgcagtccagccagggagatggacagaatgggggtaatgacactgccaagcgatcta
aggaaacatcggagaaagattgcagtagttgaagaagatgggcgtgaagataaagcaaca
atcaaatgtgaaacttctcctcctccaacacccagagctattagaatgacacataccctt
ccttcttcgtaccacaacgatgccagaagtagtttgcctgcttcattggagccggaaagc
attggtcttggcagtgtcaatagcagtcaggactccctgcacaaagctcccaagaagaaa
ggaatcaagtcctcaataggacgcttgtttggtaaaaaagagaaggctcgacttggacag
ctgagaggctatatggaaacagaagcagcagcacaagaatctctgggattgggcaaactt
ggaacccaagcagaaaaagaccgaagactaaagaaaaacatatctggacatgaacttctg
gaagaagctcggagaaagggcttgccttttgcccagtgggacgggccaacagtggttgct
tggctggagctctggctaggaatgccagcttggtatgttgctgcctgccgtgccaatgtg
aagagcggagctattatgtctgctttgtccgataccgagattcaaagagaaattggaatc
agcaatcctcttcatcgcttaaaactccgattagcaatccaggagatggtatcactcaca
agtccatcagcacctccaacatccagaacaccctcaggcaatgtttgggtgacccatgaa
gaaatggaaaatcttgctgctccagctaaaacgaaagagtctgaagaaggcagctgggct
cagacactggcttatggtgatatgaaccacgaatggataggtaacgaatggctccccagt
cttggtttacctcagtaccgcagttattttatggagtgcctggtcgatgcaaggatgtta
gaccatctgacgaagaaagacctgcgtgtgcacttaaaaatggtggacagctttcatcga
acaagcttgcaatatggaatcatgtgtttaaagaggttgaattatgatagaaaagaactg
gaaaagcgaagagaaatgagtcagcatgaaataaaagatgtgctggtgtggagcaacgat
cgagtcatacgctggatacaagctattggcctgcgagaatatgcaaataatattctagaa
agtggtgtacatggttcacttatagcactggatgaaaattttgattacagcagtttagct
ttactattacagattccaacacaaaacacccaggcacggcagatccttgagagagaatac
aacaaccttttagcactaggaactgaaagacgacttgaggaaagcgacgacaagaacttc
agacgcggcccctcctggcgacgacagttccctccccgtgaggtccacggcatcagcatg
atgcccggctcctccgaaacgctgccagccgggttcagactaaccacaacatcggggcag
tctcggaaaatggcaactgatgttgcttcatcacgactgcagaggttagacagctcaaca
gttcgcacatactcatgctga

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