KEGG   Oxyura jamaicensis (ruddy duck): 118173988
Entry
118173988         CDS       T11549                                 
Symbol
CYFIP2
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2 isoform X1
  KO
K05749  cytoplasmic FMR1 interacting protein
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja04810  Regulation of actin cytoskeleton
oja05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oja00001]
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    118173988 (CYFIP2)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118173988 (CYFIP2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oja03019]
    118173988 (CYFIP2)
Messenger RNA biogenesis [BR:oja03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     118173988 (CYFIP2)
   Factors involved in mRNA localization
    Other mRNA localization factors
     118173988 (CYFIP2)
SSDB
Motif
Pfam: FragX_IP CYRIA-B_Rac1-bd zf-CW Spore_SspJ
Other DBs
NCBI-GeneID: 118173988
NCBI-ProteinID: XP_035194851
LinkDB
Position
13:complement(join(11544851..11545018,11545584..11545731,11546202..11546440,11550204..11550298,11550820..11550892,11553954..11554084,11554794..11554884,11556406..11556549,11565180..11565267,11565735..11565934,11566596..11566715,11566930..11567038,11567983..11568059,11568628..11568724,11569449..11569605,11570157..11570310,11570682..11570829,11571116..11571282,11572055..11572180,11572810..11572929,11573806..11573923,11576658..11576749,11579390..11579494,11580848..11580976,11581662..11581758,11582075..11582256,11583149..11583250,11585356..11585433,11585513..11585602,11587672..11587788))
AA seq 1253 aa
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD
IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI
SELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWKLVHPTD
KFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQAIRNTIY
AALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPKG
GFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEEFHKQSFF
FTHLLNISEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMM
EYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSV
LLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLD
QAISRFESEDLTSIVELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRITL
HVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHI
YSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICR
LPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCD
LLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLL
TKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTNGVMHVDECVEFHRLWSAMQFVYCIP
VGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPL
KKMADRIRKYQILNNEIFAILNKYMKSVETDSSTVEHVRCFQPPIHQSLATTC
NT seq 3762 nt   +upstreamnt  +downstreamnt
atgaccacccacgtcacgctagaggatgccctgtccaacgtggacttgctggaggagctg
cccctgcccgaccagcagccatgcatcgagccgcccccttcctccatcatgtaccaggct
aattttgacacaaactttgaagacagaaatgcctttgtgaccggcatagccaggtacatc
gagcaggcgacggtgcactccagcatgaacgaaatgctggaggaaggccacgagtacgcc
gtgatgctttacacgtggaggagctgctcacgagccatcccccaggtgaaatgtaatgaa
cagccaaaccgagtggagatttatgagaagacagtggaagtcctggagccagaagtcacc
aagcttatgaagttcatgtattttcagcgcaaggcaatcgagaggttctgcagcgaggtg
aagcgcctgtgccacgccgagcggaggaaggactttgtctctgaggcctatctcctcacg
ctgggcaagttcatcaacatgtttgctgtcctggatgagctgaagaacatgaagtgtagc
gtcaaaaatgaccactctgcctacaaaagagctgctcagtttctgcggaagatggcagac
ccccagtccatccaggagtcccagaacctctccatgttcctggcaaaccacaaccgtatc
acgcagtgtctgcaccagcaactagaggttatccctggctatgaggaactgcttgctgat
attgtcaacatctgtgtggattactatgaaaacaagatgtatctcacacccagtgaaaaa
cacatgcttttaaaggtgatggggtttggcctgtatctcatggatgggaacgtcagcaac
atttacaaactggacgccaagaagagaatcaaccttagcaaaatagacaaattcttcaag
cagctgcaggtggttcctttattcggcgatatgcagatagaactggccagatacattaag
accagtgctcactatgaggagaacaaatccaagtggacatgcactcagagcagcataagt
ccccagtacaacatctgcgagcagatggtgcagatccgggacgaccacatccgcttcatc
tcagagctcgctcgctacagcaacagcgaggttgtcaccggctcagggctggacagccag
aagtcagatgaagagtacagggagctctttgatctcgctttacgggggctgcagctgctg
tccaagtggagtgcccacgtcatggaagtgtactcttggaagctggttcatcccacagat
aagttttgcaacaaggattgcccaggaacagcagaagagtatgaaagagccacccggtac
aactacaccagtgaagagaagtttgcctttgtggaggtaattgccatgatcaaaggcctg
caagtgttgatgggccggatggagagtgtctttaaccaagctatccgcaacaccatctat
gcagccctgcaggactttgcccaggtgaccctgcgagagccactcaggcaggcagtcagg
aagaagaagaacgtcctgatcagtgttcttcaagcaattcggaagacaatctgtgactgg
gagggaggtcgagagccaccaaatgatccttgcctgagaggtgagaaggatcctaaaggt
ggatttgatattaaagtcccacgaagagcagtaggaccatcaagtacgcagctctacatg
gtgcggaccatgctggagtccctcatagcagacaagagtggctcaaagaagactctgagg
agcagcttggatggaccgatagtcttggccattgaggagttccacaaacagtccttcttc
ttcacccaccttctcaacatcagtgaagcgctgcagcagtgctgcgacctgtcccagctc
tggttccgggagttcttcctggagctgaccatgggccgccgcatccagttccccatcgaa
atgtccatgccttggatcctcacggaccatattctggaaaccaaagagccctccatgatg
gagtatgtactgtaccccttggacctctataatgacagcgcatactatgccttgaccaag
ttcaaaaagcagttcctgtatgatgaaattgaagctgaagtgaatttgtgctttgatcaa
tttgtgtacaagctggcagatcagatctttgcctattataaagcaatggctggcagtgtt
ttattggacaaacgtttccgggccgagtgtaagaattacggggtgatcattccataccca
ccatccaaccgctacgagacactgctaaagcagaggcacgtccagttgctgggtaggtca
attgacctgaacaggctcataacccagcgtatctcagcagcgatgtacaaatcattagac
caggccattagccgcttcgagagtgaggacctgacatccatagtggagctggagtggctg
ttggaaataaatcgcctgactcacaggttgctgtgcaagcacatgactttggacagcttt
gatgccatgttccgggaggccaaccacaacgtctccgcaccctatgggcgcatcaccctc
catgtcttctgggagctcaactttgactttctacccaactactgctacaatggatccacc
aacaggtttgtgaggacggcaatccccttcacacaggaaccccagcgggacaaaccggcc
aacgttcaaccctattacctctatggatccaagcctctcaacattgcctacagtcacatc
tacagctcctaccgcaattttgtggggccgcctcatttcaagacgatctgcaggcttctt
ggctatcaagggatcgcggtggtcatggaggagctgttgaagatcgtcaagagcctgctg
caaggcaccatcctgcagtacgtgaagactctgatagaagtaatgcccaagatatgccgc
ttgccaagacacgaatacggctctccaggaatcctggagtttttccaccaccagctgaag
gacatcattgagtatgcagagctgaagactgatgtgttccagagcctcagagaagtgggc
aatgccattctcttctgcctccttattgagcaggctttgtcccaggaagaagtttgtgat
ttgctgcatgctgctcccttccaaaatattttgcccagggtctacatcaaagaaggagaa
cgcttggaggtgcgcatgaagcgtctcgaagccaagtatgccccacttcacctggttccc
ttaatagagaggctgggcactccgcagcaaatagctatcgcccgggaaggtgacttgctg
accaaggagcggctgtgctgcgggttgtccatgttcgaggtgatcctgacacgaattagg
agctacctgcaggacccgatctggcgcggacctcccccgacgaacggggtcatgcacgtg
gatgaatgcgtggagtttcaccgcctctggagcgcgatgcagtttgtgtactgcatccct
gtgggcacgaatgagttcactgcagagcagtgctttggagatggtctgaactgggcaggt
tgctcgatcatcgttctccttggacaacaacggcgctttgacctctttgacttctgctat
cacctgttgaaggtgcagaggcaggatgggaaggatgaaatcataaaaaacgtgcccttg
aaaaagatggccgacaggatcaggaagtatcagatcctgaacaacgagatttttgccatc
ctgaacaagtacatgaagtcagtggaaacagacagttccacggtggagcacgtgcgctgc
ttccagccccccatccaccagtcgctggccaccacctgctag

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