Oxyura jamaicensis (ruddy duck): 118174055
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Entry
118174055 CDS
T11549
Symbol
RAI1
Name
(RefSeq) LOW QUALITY PROTEIN: retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
oja Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oja03000
]
118174055 (RAI1)
Transcription factors [BR:
oja03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
118174055 (RAI1)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
118174055
NCBI-ProteinID:
XP_035194961
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Position
14:complement(join(2962018..2962032,2962427..2962476,2962726..2962819,2964067..2964312,2964314..2969614))
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AA seq
1901 aa
AA seq
DB search
MQSFRERCGFHGNQQSYQPTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYSG
YENSAVEKYHRGNKQLAGQQLQGRPAFSNYAVQENSPYPARYSGDESLQAWGSQPQALPG
GVAKYEDSLMKKTAAPAGGRPYHEPAAATPLPFRTHFQQQQQQQPPALPYPKLQRQKLPN
DVSSPMPFPQSPHFGQHSQSFPASSTYSSVPGGSQPAHSYKSCTAPSGQPPLERPLGSAA
SLAPGPRVPNLHGYQPNRIGYEQPPQPPPQPPQPPPPPQPPQPPQPQPQPLQGRHHAPET
LHYQNLAKYQHYNQPGQTYCQGDAPPVRTPEQYYQTFSPSASHSPARSVGRSPSYSSTPS
PLMPNLENFQYSQQPLSAGAFPAGIADHSHFMPLLNPSPTDGTSPDAQSGNCKNLPKEKL
PENLLSDLSLQSLTALTSQVENISNTVQQLLLSKSAVPQKKGIKTPARTPEQLKGQHCSP
ESSTYSAEQVGTPLSDPLSTPQSVHAETQDADYLSGSEDQLERSFLYCNQNRSPARVNSN
SKAKPESVSTCSVTSPDDMSTKSDDSFQSIHASLPLETFTKYVTNERDCPRLLLSALSQE
ELASEIIVLQDAISEKGDKAWANSPMLSKEATKSPFQLENHRPCLDSMVKGAWPSQGDSS
TLTEPLKLDKASGGSAGKDFGEEVYEGPQVEFAATETKDSLKDAAPLAFNSKPSIPAATS
SAGASSFSCYSTTTANSVDSENAMEHFEWPEESLGEACLRWKELGSGLQASDLPKGLFPS
KMVGSCKEKKNACSLDLCDGEQPAKSEPARDFAQQAMEEEEEETLTYDEATKADSERWLQ
DTRHCCSAGDFGEIPMISSPELKESDLEAEEYSSLCELAGAEQKSVPYDASPPKPPEMPA
VLSASEVPVSAEETVSTVEKDGSAPSARLSGQSVILLGPAVGTETKVKSWFKSSLPHIQP
EESGGGEKPLPEVADSEPLKKQLVPETVLGKTEPVSRGKSLRNKRVHCRLPEGDSAGSAV
PSPFDELPVACVRPDGQVEMPSKNAHSQTPRFAAEGLPARMCTRSFTALAEPRTPAPLEG
LKVPVHQEKLGKKPACGVKQRVAFKARKRSGRPAPKVVQNAGGDATLLVPGLVPAEEAAG
PTPPEGDAVDAGERDQRSMILRSRTKTQEVFYTKRRRGKRAADVRLKNCKAPKKLINNHL
PPAFKLAPPGSPHKEGKVGARMKLPKAGPGVGGKMSERPLHSLKRKSTFISPIPAKKRNL
VLRSNSGGMKEEKPEGPPSLFKKMPVAKKVKAKLPPKSPGEAVPKPPPPKEAPDVCIKIT
SRAAFQEATKTKVLPPRKGRGLKLEAIVQKITSPNLKKFACKPAATAAAAAAVAATYGTS
LSPAGAERERAVKHGGVAPAVGDARLPKPAAAQKAPAAPSAEQFCRNPHGRALKGKPGSG
KKLSADGFQGETCVPAVVAPPGSAVVAKNVALLPKKRNRKGKAAALGMAKAPLGPALPLP
PRERAAGPGGGDEAPREGKKPKSEEKEAGGGEGPEGRSTGGPARGPKPRANHANYNGYSK
RQRKRLAHGKAKAVPSRCKSRGKRRRQAQQAPLLHPAEPEIRLKYISCKRLRADSRAPPF
APYVRVERRGEFTTACTVVNSPGEEARLQRGPAGTAPRPRAALPASSTMHLGPVVSKALS
AACLVCCLCRNPANYKDLGDLCGPYYPEDCLPKKKSRLKEKARAEGEEAGAAERGPKGTE
SSWAAGGKPPRPEGAAEAAKQSSLRSSPRGMFRRLQSCYCCDERTEGEEAAEKPRRHECS
KAESPPQEPAGDTQEHWLHEACAIWTAGVFLVAGKLYGLQEAVKAAADVKCSSCQQAGAT
VGCCQKGCPHTYHYACAIDTGCSLTEESFSLRCPKHKRQPV
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccagcagagctaccagccgact
tcacaagatacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgc
gagcggcagaggctggtggcgaaggagtactacagtcagcagcaactgccgtactcgggc
tacgagaacagcgccgtggagaaataccaccggggaaacaagcaattagcggggcagcag
ctgcaaggcaggccggccttttccaattacgccgtgcaggagaacagcccctacccggcc
cgctattcgggggacgagagcctgcaggcgtggggcagccagccgcaggcgctgcccggc
ggcgtggccaagtatgaggacagcctgatgaagaagacggcggcgccggcgggcgggcgg
ccctaccacgagccggcggcggcgaccccgctgcccttccggactcacttccagcagcag
cagcagcagcagccgcccgcgctcccctaccccaagctgcagcggcagaagctgcccaac
gacgtctcctcgcccatgcccttcccgcagagcccccatttcgggcagcactcgcagtcc
ttccccgcctcctccacctactcctcggtgccggggggcagccagccggcgcactcctac
aagagctgcacggccccctcggggcagccgccgctggagcggcccctgggcagcgccgcc
agcctggcccccggcccccgcgtgcccaacctgcacggctaccagcccaaccgcatcggc
tacgagcagcccccgcagcccccgccgcagcccccgcagcccccgccgccgccgcagccc
ccgcagcctccccagccccagcctcagcccttgcaggggaggcatcacgccccggagacc
ctccactaccaaaacctggccaagtaccagcattacaaccagccggggcagacctactgc
cagggcgacgcaccgcccgtccggacgccggagcagtactaccagaccttcagccccagc
gccagccactcgccggcacgctctgtcggccggtcgccgtcctacagctccacgccgtcc
ccgctgatgcccaacctggagaacttccagtacagccagcagccgctgagcgccggcgcc
ttcccggccggcatcgccgaccacagccatttcatgccgctgctgaacccttctcccacc
gacgggacgagcccggatgctcagtccgggaactgcaagaacctgccgaaggagaagctg
cccgaaaacctgctgtcggacctgagcctgcagagcctgacggcgctcacctcccaggtg
gagaacatctccaacaccgtccagcagctgctgctctccaaatcggccgtgccccagaaa
aaaggcatcaagaccccggcgaggacccccgagcagctcaaggggcagcactgcagcccc
gagagcagcacgtactccgcggagcaggtcgggacgcccctgtccgacccgctcagcacc
ccgcagtccgtccacgccgagacgcaggacgccgactatctcagcggctcggaggaccag
ctggagaggagcttcctgtactgcaaccagaaccgcagccctgcccgcgtcaacagcaac
tccaaggcgaagcccgagtccgtgtccacctgctccgtcacctccccggatgacatgtcc
accaaatcggacgactccttccagagcatccatgccagcctgcccctggagaccttcacc
aagtacgtgaccaacgagcgggactgtccccggctgctcctcagcgcgctgtcccaggag
gagctggcctccgagatcatcgtcctgcaggacgccatcagcgagaagggggacaaagcc
tgggccaactcgcccatgttgagcaaggaggccaccaagtcccccttccagctggagaac
caccggccgtgcctggactccatggtgaagggcgcgtggcccagccagggcgactccagc
accctcaccgagcccctcaagctggacaaggcttcggggggcagcgcggggaaggacttt
ggtgaggaggtgtatgagggtccccaggtggagttcgcggccaccgagaccaaggactcg
ctcaaggatgcggccccgctggccttcaattccaagcccagcatcccagccgccacttcc
agcgcgggggcctccagcttcagctgctactcgaccaccacggctaactcagtggactcc
gaaaacgccatggagcacttcgagtggccggaggagagcctgggcgaggcgtgcctcagg
tggaaggagctgggctcaggcctgcaagcctccgacctccccaagggcttgttccccagc
aaaatggtggggtcctgcaaggagaaaaaaaatgcctgcagcttggatctgtgcgacggc
gagcagccggccaagagcgagccggcccgggactttgcccagcaggcgatggaggaggaa
gaggaggagacgctgacctacgacgaggccacgaaggcagacagcgagaggtggctgcag
gacacccggcactgctgctcagccggggactttggtgagatccccatgatctcgtcgccg
gagctgaaggagtcggacctggaggcggaggagtactcctcgctctgcgagctggcgggc
gcagagcagaagtcggtgccctacgacgcctcaccccccaagcccccggagatgcccgcc
gtgctgtcggccagcgaggtgcccgtgtccgccgaggagaccgtcagcacggtggagaag
gacggctctgcgccctcggcgcgcctctccggccagtccgtcatcctgctgggacctgcg
gtgggcacggagaccaaggtgaagagctggttcaagtcctccctgccccacatccagccc
gaggagagcggcggaggggagaagcctctcccggaggtggcagactccgaacccttgaag
aagcagctggtgcccgaaaccgtgctggggaagacggagcctgtctcacggggcaagagc
ctccgcaacaagagggtccactgccggctgccggagggggacagcgccggcagcgcggtg
ccgagccccttcgatgagctgccggtggcgtgcgtcaggccggacgggcaggtggagatg
ccgagcaagaacgcccacagccagacgcccaggtttgcggcggagggcttgccggcacgc
atgtgcacccgctccttcaccgccctcgccgagccccgcaccccggccccgctggagggg
ctgaaggtgccggtgcaccaggagaagctggggaagaagccggcctgtggggtgaagcag
cgggtggctttcaaagccaggaagcgcagcggccggccggcccctaaagtggtccaaaac
gccggcggcgatgccaccctcctggtgcctggcttggtgccggccgaggaggcagcgggg
ccgacgccgccggagggggacgcggtggacgcgggggagagggaccagcggtcgatgatc
ctgcgctcccggacgaagacgcaggaggttttctacaccaagaggcggcggggcaagcgg
gcggcggacgtgcggctgaagaactgcaaggcgcccaaaaagctcatcaacaaccacctc
ccccccgccttcaagctggcccccccgggcagcccccacaaggagggcaaggtgggcgcc
cggatgaagctgcccaaagcggggccgggagtgggcggcaagatgtccgagcggcccctg
cactcgctgaagaggaagtccaccttcatctcccccatccccgccaagaagaggaacctg
gttctgcgcagcaacagcggcggcatgaaggaggagaagcccgagggtccccccagcctc
ttcaagaagatgcccgtggccaagaaggtgaaagcaaagctgccccccaagagccccggt
gaagccgtcccgaaaccccccccgccaaaggaggcccccgacgtctgcatcaagatcacc
tcccgggcggccttccaggaggccaccaagaccaaagtgctgcctccccgcaagggccgc
ggcctcaagctggaggccatcgtgcagaagatcacctcgcccaacctgaagaagttcgcc
tgcaagccggcagccacagcagcggcggcggcggcggtggcagccacctacggcacgtcc
ctgagcccggcgggggcagagcgggagcgggcggtgaagcacggcggcgtggccccggcg
gtgggtgacgcgcggctgcccaaaccggcggcggcgcagaaagcacccgcagcaccgtcg
gctgagcagttctgccgaaacccccacggcagagcgctgaaggggaagccgggcagcggg
aagaaactctccgccgacggcttccagggtgagacgtgcgtgccggccgtggtggcaccg
cccggctcggcggtggtggccaagaacgtggcgctgctgcccaagaagaggaaccgcaag
ggcaaagcggcagcgctgggcatggccaaggcgcccctgggccccgcgctgccgctgcca
ccccgcgagcgggcggccgggccgggcggcggggacgaggcgccgcgggagggcaagaaa
ccaaagagcgaggagaaggaggcggggggcggcgagggccccgaggggcgttccacgggc
gggccggcgcgagggccgaagccgcgggccaaccacgccaactacaacggctactccaag
cggcagcggaagcgtctggcccatggcaaggccaaggcggtgccgtcgcggtgcaagagc
cggggcaagcggcggcggcaagcccagcaagcgccgctgctgcaccccgccgagcccgag
atccgcctcaagtacatctcctgcaagcggctgcgggccgacagccgggccccccccttc
gcgccctacgtccgcgtggagcggcgcggcgagttcaccaccgcctgcaccgtcgtcaac
tcgcccggagaggaggcccggctgcagcgggggcccgccggcacggcgccgcggccgcgg
gcggccctgcccgcctcgtccaccatgcacctggggcccgtggtgtcgaaggcgctgagc
gccgcctgcctggtgtgctgcctgtgccgaaaccccgccaactacaaggacctgggggac
ctgtgcgggccctactaccccgaggactgcctgcccaagaagaagtcgcggctgaaggag
aaggcgcgggcggagggcgaggaggccggcgcggcggagcgcgggccgaaagggacggag
agcagctgggcggccggcggcaagccgccgaggccggaaggtgccgccgaggctgccaag
cagagctcgctccgctccagcccccggggcatgtttcgcaggctgcagagctgctactgc
tgtgacgagaggacagagggcgaggaggcggccgaaaagccccggaggcacgaatgtagc
aaagccgagtccccgccgcaggagccggcgggcgacacgcaggagcactggctgcacgag
gcctgtgccatatggaccgctggggttttcctggtggcggggaagctctacgggctgcag
gaggccgtcaaggcggctgccgacgtgaagtgctcgagctgccagcaagcgggagccacg
gtgggctgctgccagaaggggtgtccccacacctaccactacgcgtgtgccatcgacaca
ggttgctcactaaccgaagagagcttctctctgcgatgtcccaagcataagaggcagccc
gtgtag
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