KEGG   Oxyura jamaicensis (ruddy duck): 118174079
Entry
118174079         CDS       T11549                                 
Symbol
DDX17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
  KO
K13178  ATP-dependent RNA helicase DDX17 [EC:5.6.2.7]
Organism
oja  Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:oja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oja03041]
    118174079 (DDX17)
Enzymes [BR:oja01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     118174079 (DDX17)
Spliceosome [BR:oja03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    118174079 (DDX17)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-GeneID: 118174079
NCBI-ProteinID: XP_035195030
LinkDB
Position
1:join(53230654..53230697,53234828..53234978,53237021..53237120,53237267..53237400,53238145..53238210,53238499..53238640,53240735..53240895,53240983..53241155,53241480..53241590,53242071..53242132,53242489..53242548,53246760..53246999,53247679..53248202)
AA seq 655 aa
MRGFGDRGRDRDRGGFGASRGGPLPPKKFGNPGERLRKKKWDLNELPKFEKNFYVEHPEV
ARLTPYEVEELRRKKEITIRGMEGCPKPVFAFHQCSFPQYVMDALMDQNFTEPTPIQCQG
FPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQ
QVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINVGN
LELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRD
GWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGGGG
GGGRSRYRTSSSVNNPNLMYQEECDRRLRGVKEGRRDSGGFRDRERGDSYANGANKTYGS
AYGSPNSAFGAAQSQYGYTQGSYGAAAYGTSGYGTAEYSASGYGASTTAATAGRTSQSTT
QQQYAGMVGRSGQQPQPLMSQQFPQPPATNVMGYMGQTATYQYPPPPPPPPPSRK
NT seq 1968 nt   +upstreamnt  +downstreamnt
atgaggggcttcggggaccgggggcgcgaccgagaccgcggcggctttggagcaagtcgt
ggaggtcctcttcctccaaagaaatttggtaatccaggggaacgcttacgtaagaaaaaa
tgggatttaaatgagttacccaagtttgagaagaatttttatgtggaacatccagaagtg
gccaggcttactccgtatgaagttgaagaactgagaaggaagaaagagataacaattcga
ggaatggagggctgccccaagcccgtgtttgccttccaccagtgtagctttccacagtat
gtgatggatgccttgatggaccagaatttcacagaacccactccaattcagtgccaaggt
tttccacttgctctcagtggccgtgatatggtgggcattgcgcagactggctctgggaag
acactagcgtacttgttgcctgcgatcgttcacatcaaccaccagccatatttggagaga
ggggacggcccaatttgcttggttctagcacctaccagagagttggcccagcaagtgcag
caagtggctgatgattatggcaaatgttcgaggctgaagagtacctgcatatatggagga
gcacccaaaggtccccagatcagagatctagaaagaggtgtggagatctgcattgctaca
ccgggtcgcttgattgacttccttgaggcaggaaagaccaaccttcgtcggtgtacgtac
cttgtgctggatgaagcggacagaatgttggacatgggatttgaaccccaaatccgtaaa
attgttgatcagataaggcctgacagacagactctgatgtggagtgccacctggccaaaa
gaagtgcgccagcttgcggaggacttcctacaggactacgttcagatcaatgtggggaac
ttggagctgagtgccaaccacaatatcctgcagatagtggatgtatgcatggaaagcgag
aaggaccataagctgatacaactgatggaagaaatcatggcagagaaggagaataaaacc
atcatctttgtggagacaaagaggcgatgtgatgatctcactcgaaggatgcgcagagat
ggttggccagctatgtgtatccatggagacaagagtcagccggaaagagattgggtgctt
aatgagtttcgttctggaaaggctcctatcctcattgctaccgacgttgcatctcgtggg
ctagacgtggaagatgttaaatttgtgataaactacgactatccgaacagctctgaagat
tacgtgcaccgtattggccgcaccgcgcgtagtaccaacaaaggtactgcgtacacgttc
ttcacaccaggaaacctgaaacaagccagggagcttatcaaagtgttggaagaagccaat
caagccatcaatccaaagctgatgcagcttgtggaccacagaggaggaggaggtggtggt
ggaggaggccgttctcgttaccgaacgagcagttcagtaaacaaccctaacctgatgtac
caggaagagtgtgacaggaggctccggggagtgaaagagggccggagagactcaggtggc
ttcagagaccgtgagcgtggtgacagttatgccaacggagccaacaagacctatggcagt
gcctacgggagcccaaattccgcttttggggcagcacagagccagtatggttacactcaa
gggagctatggagcagctgcctatggcacgagtggctatggcactgcagagtacagtgct
agtggctatggtgccagcaccacagctgccaccgctgggagaacctcacagagcactacc
caacagcagtatgcagggatggtggggcgctcgggccagcagccacagccgctcatgtca
caacagtttcctcagccccctgccactaacgtgatgggctatatgggacagactgccacc
taccagtatccaccccctcccccgcccccgcccccctcacgcaaatga

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