KEGG   Oxyura jamaicensis (ruddy duck): 118174496
Entry
118174496         CDS       T11549                                 
Symbol
POLR3E
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC5 isoform X1
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja03020  RNA polymerase
oja04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:oja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    118174496 (POLR3E)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    118174496 (POLR3E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oja03021]
    118174496 (POLR3E)
Transcription machinery [BR:oja03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     118174496 (POLR3E)
SSDB
Motif
Pfam: RPC5 RPC5_C
Other DBs
NCBI-GeneID: 118174496
NCBI-ProteinID: XP_035195752
LinkDB
Position
14:complement(join(7795802..7795858,7798060..7798185,7799153..7799230,7803664..7804160,7805680..7805744,7806038..7806195,7806980..7807039,7809440..7809521,7811144..7811264,7812080..7812171,7812254..7812298,7813178..7813263,7813803..7813922,7814218..7814267,7814737..7814844,7815562..7815644,7816438..7816553,7817213..7817290,7817979..7818029,7819122..7819157))
AA seq 702 aa
MANEEDDPIIQEIDVFLARSLLEKLYLFQYPIRPASMTYDDVTHLSAKIKPKQQKVELEM
AIDTLNPNYCRSKGEQIALNVDGTCTDETNTYSSKLMDKQTFCSSQAASNVSRYAAAVYR
KGELHLTPLHGILQLRPSFTYLDKADAKHREREAANEGGDSSQDEAEDDVKQITVRFSRP
ETEQARQRRVQSYEFLQKRQAEEHWVHLHYYGLKDSRSEHERQYLFSQTHGLAENTELIK
SPSEYLMMLMPPSVEEENDKPVAPSNVLSMAQLRTLPLADQIKILMKNVKVMPFANMMSL
LGSGTDSTAVLRCIQQVAMLVQGNWVVKSDVLYPKDTSSPHSGVPAEVLCRGRDFVMWKF
TQGRWVVRKEVAAVTKLCPEDVKDFLEHMSVARINKGWEFMLPYDEDFVKKHPDIVQRQH
MLWMGIQAKLEKVYNLLKEHLTPKKQETQSGHPLLVSGEQRVNMAKARVKQNYGQLEKEF
QKQKAELKSNDASAKMDVSNIRIKEEPVSDEEPMDTSAYEGMNNGVVNGLHAEEDSMDSL
NGHLPGSCGDRVAQELKAFVSSTFKKQFVLTLSELKRLFNLHLASLPPGHTLFSGISDKM
LQDMVLDTGCKQILVPFPPQTAASPDELKVYALWEAGDTYDQHRQVLLEIFSKNYRVRRN
VIQNQLSQECGEDINKQEVDRVLKDCCVSYGGMWYLKGTVQS
NT seq 2109 nt   +upstreamnt  +downstreamnt
atggcaaatgaagaagatgatccaattatacaagagattgatgtgttcctggccagaagt
ctactggagaagctgtatctttttcagtatccaattcgtccagcttctatgacgtatgat
gatgttacacatttatcagcaaagataaaaccaaagcagcaaaaggttgaacttgaaatg
gccattgacactttgaatcctaactactgtcgcagcaaaggagaacagattgccctcaat
gtagatggcacgtgtacagatgaaacaaatacttattcctcgaagctgatggacaaacaa
actttctgctcttcgcaagctgcaagtaatgtttcccgctatgcagctgctgtttataga
aaaggtgaacttcacctgactccactacatggaattcttcagctgaggccaagtttcacc
tacttggacaaagctgatgcaaaacaccgagaaagagaagctgctaatgaaggtggtgat
tcatcccaggatgaagctgaagatgatgttaagcagattactgtacgattttcccgccct
gagaccgaacaagctcgtcaacgacgtgttcagtcttatgagttcctgcagaagagacaa
gcagaagagcactgggttcatctacattattatggcttgaaggatagccgttctgaacat
gagcgccagtatttattcagtcaaactcatggtctcgccgagaatacagaattaattaaa
tctcccagtgaatatttaatgatgctgatgcctccaagtgtagaggaagagaatgacaaa
ccagtggctccaagcaatgtgctttctatggcccagctgagaactttaccccttgctgat
cagattaagatcctgatgaagaatgtgaaggtcatgccatttgcaaatatgatgagtttg
ctaggctctgggactgactctacggcagttctccgctgtatacagcaggtggcaatgctg
gtccagggaaactgggtggtgaagagtgatgtcctctacccaaaagatacgtctagtcca
catagtggagtccctgcagaagtgctttgtagagggagagactttgttatgtggaagttc
acacagggccgctgggttgtgcgaaaggaagtggcagcggttacaaaactttgcccagaa
gatgtgaaagacttcctagagcacatgtctgtggcaagaataaacaaaggttgggagttc
atgctcccttatgatgaagactttgttaagaagcatccagatatagttcagaggcaacat
atgctgtggatgggcattcaggccaaattagaaaaggtctataatcttttaaaggaacac
ttgacaccaaagaaacaagagacacaatcaggtcatccgttgctggtttctggggagcaa
agagtcaacatggctaaagcgagagtcaagcagaactacgggcagctggagaaggagttc
cagaagcaaaaggcagagctgaaatcaaatgacgcttcagccaagatggatgtctccaat
atccgcatcaaagaggagcctgtgagcgatgaggagcccatggacacctcggcttacgag
ggcatgaacaacggcgttgtcaacggcctccacgcagaggaggactccatggactcctta
aacggccacttgcctggaagctgcggtgaccgggtggcccaagaactgaaggcgtttgtg
tcctcaacgtttaagaaacaatttgtactcaccctgagtgagctcaaacggttgtttaac
cttcacttagccagtctgcctccaggacacacgttgttcagtggcatttcggacaaaatg
ttacaggacatggtgctggacactggctgcaaacaaattttggtgccttttcctccacag
actgctgcttcaccagatgaattaaaggtttatgcactttgggaagccggtgacacttac
gatcagcatcgccaagttttgcttgaaatcttttcgaaaaattatcgagtgcgcagaaat
gtcattcagaatcagctgagtcaagaatgcggagaagatataaacaagcaggaggtggat
agagtgttaaaggactgctgtgtgagctacggcggaatgtggtatcttaaagggactgtg
cagtcttga

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