Oxyura jamaicensis (ruddy duck): 118174677
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Entry
118174677 CDS
T11549
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
oja Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oja03041
]
118174677 (TFIP11)
Spliceosome [BR:
oja03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
118174677 (TFIP11)
Other components
Complex C specific factors
118174677 (TFIP11)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
118174677
NCBI-ProteinID:
XP_035196052
LinkDB
All DBs
Position
15:join(960650..960840,961119..961272,961934..962090,962585..962712,963168..963320,963930..964439,965140..965246,965464..965632,965838..966081,966737..966879,967158..967323,968431..968786)
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AA seq
825 aa
AA seq
DB search
MSMSHLYGGEDGVELERFEVSEWDLHNEFNPHRARHRPSKEEATYGVWAERDSDEERPSF
GGKRSRDYSAPVNFISAGLKKSAAEDGSEEDSEEDEKPAKQEEMPKEFVPKKLKTGGNFK
PSQKGFVGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGKGLGKNAQGIINPIEAKQRKG
KGAVGAYGSERTSQSLQDFPVVDSEEEAEEEFQKELSQWRKDPNGGKKKPKYSYKTVEEL
KAKGRISKQLSAPQKELSQVKVIDMTGREQKVYYSYSQISHKHNIPDDSPQQPLGKDAKP
QGFALPELEHNLQLLIDITEQEIIQSDRQLQYERDMVVNLTHEIQKMSEVLSHEETAISN
LSKVLDMVEECERRMQPNCENPLTLDECAKIFETLQDKYYEEYRMSDRVDLAVAIVYPLM
KDYFKSWDPLKDCTYGTEIIAKWKSLLENDQLLSHGGQDLSTDAFHRLMWEIWMPYVRNI
VAQWQPRNCGSMVDFLDSWVHVVPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWI
HPWLPLMQARLEPLYSPIRNKLANALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNI
VPKLGMCLNELIINPHQQHMDAFYWVVDWEGMISVSSLVGLLEKHFFPKWLQVLCSWLSN
SPNYEEITKWYLGWKSMFSDQVLAHPSIKDKFNEALDIMNRAVSSSVGGYMQPGARENIA
YLTHTERRKDFQYEAMQERREAENMAQRGIGMAASSVPMNFKDLIQTKAEEHNIVFMPVI
GKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgcacctgtacgggggggaggatggcgtggagctggagcgcttcgaggtg
tcggagtgggacctgcacaacgagttcaacccgcaccgtgcgcggcaccggccctccaag
gaggaggccacgtacggcgtgtgggcagagcgcgactcggacgaggagcggcccagcttc
ggcggaaagcgctccagagactactcggcccccgtgaacttcatcagcgccgggctgaag
aagtcggcagcagaggatgggtcggaggaggactctgaggaagatgagaagcccgccaag
caggaggaaatgcccaaggagttcgtgccaaagaagctcaagacgggcggtaatttcaag
cctagtcagaaaggcttcgtaggggggacaaaatctttcatggacttcggcagctgggag
aggcacaccaagggaattgggcagaagctcctccagaagatgggttatgttcccggaaaa
ggtcttgggaagaatgctcaaggtatcatcaatccaattgaggccaagcagagaaaaggc
aaaggagccgtgggagcatacggctctgaacgaaccagccagtctttgcaagacttccct
gttgttgactcagaagaagaagctgaagaggaatttcaaaaagagctcagtcagtggcgg
aaggatcccaatggaggcaagaagaagcccaaatacagctataagacagtagaagaactg
aaagccaagggcaggatcagcaaacagctttcagcccctcagaaggagctgtctcaagtc
aaggttatagatatgacgggccgggaacaaaaggtttattacagctacagtcaaatcagc
cacaagcacaacatcccagacgacagcccccagcagccgctgggcaaagacgccaagccc
cagggatttgccttgcctgagctggagcacaacttacagctcctcatcgacatcacggag
caggagatcatccagagtgaccggcagctgcagtatgagagggacatggttgtcaacctg
acccacgagatccagaagatgtctgaagtcctctcgcacgaggagaccgcgatcagcaac
ctcagcaaggtcctggacatggtggaagagtgcgagagacggatgcagcccaactgtgag
aatcccttgactctggatgagtgtgcgaagatttttgagacgcttcaagacaagtactac
gaagaatacagaatgtctgacagggtagacctggcggtggcaatagtctatcctctcatg
aaagattacttcaagagctgggatcccctcaaggactgtacgtatggcacggagatcata
gccaagtggaagagccttttggaaaacgaccagctgctgtcgcacggtgggcaggacctc
tcgacagatgcttttcacagactgatgtgggaaatctggatgccgtacgtcaggaacata
gtagctcagtggcaacccaggaactgtggatcgatggtggatttcttggacagctgggta
cacgttgttcccgtgtggatactggataacattctggatcagctcatcttccccaagcta
cagaaagaggttgaaaactggaatcctttgacagacacggtcccgatccattcgtggatc
cacccctggcttcccctgatgcaggcacgattagagccgctgtattctcccatccgaaac
aagctggcgaacgcgctgcagaaatggcatcccagtgactcctcagccaaactcatcctt
cagccctggaaggacgtgttcacacctgggtcgtgggaggccttcatggtcaaaaacatt
gtgccgaagctagggatgtgtttgaatgaactcataataaacccgcaccagcagcacatg
gatgccttctactgggtggttgactgggaggggatgatctctgtctccagtcttgttggg
ctgctggagaaacacttcttccccaagtggctgcaggtgctgtgttcttggctcagtaac
agccccaattatgaagagattacaaagtggtacttgggctggaagtccatgttctcagac
caagtgttggcacatccgtcgatcaaagacaaatttaatgaagctctcgatatcatgaac
cgcgctgtctcttccagcgttggtggctacatgcagccgggggctcgggagaacatcgcg
tacctgacgcacacagagcggaggaaagacttccagtacgaggccatgcaggagcggcga
gaggccgagaacatggcccagcgaggcatcggcatggctgccagctccgtgcccatgaac
tttaaggacctgattcagacgaaggcagaggagcacaacatcgtgttcatgcctgtgatc
ggcaagcggcacgaagggaagcagttgtacacgtttggacggattgtgatttatatcgac
aggggcgttgtgtttgtgcagggagaaaagacttgggtgccaacctccctccagagtctc
atcgatatggcgaagtga
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