Oxyura jamaicensis (ruddy duck): 118174833
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Entry
118174833 CDS
T11549
Symbol
SEPTIN5
Name
(RefSeq) septin-5 isoform X1
KO
K04557
septin 5
Organism
oja Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oja04131
]
118174833 (SEPTIN5)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oja04812
]
118174833 (SEPTIN5)
Membrane trafficking [BR:
oja04131
]
Exocytosis
Calcium ion-dependent exocytosis
Septins
118174833 (SEPTIN5)
Cytoskeleton proteins [BR:
oja04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 2
118174833 (SEPTIN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Septin
RsgA_GTPase
MMR_HSR1
GTP_EFTU
Dynamin_N
VapE-like_dom
AIG1
Ras
AAA_16
ABC_tran
Roc
nSTAND1
AAA_22
AAA_29
Motif
Other DBs
NCBI-GeneID:
118174833
NCBI-ProteinID:
XP_035196384
LinkDB
All DBs
Position
15:join(10340116..10340205,10344878..10345025,10345404..10345490,10346043..10346166,10346338..10346472,10347147..10347264,10347587..10347688,10348588..10348684,10349954..10350089,10351814..10351916,10352515..10352571)
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AA seq
398 aa
AA seq
DB search
MDSIIIQERLVERLLSPRTQAQRSHPAKLKAGVVAHPDLLLPASALQDHEKQYVGFATLP
NQVHRKSVKKGFDFTLMVAGESGLGKSTLVNSLFLTDLYKDRKLLNAEERINQTVEIVKH
TVDIEEKGVKLKLTIVDTPGFGDAVNNTECWKPITDYIDQQFEQYFRDESGLNRKNIQDN
RVHCCLYFISPFGHGLRPVDVEFMKALHEKVNIVPLIAKADCLIPSEIRKLKERIREEID
KFGIKVYQFPECDSDEDEEFKQQDRELKESAPFAVIGSNTVVEAKGQRVRGRLYPWGIVE
VENQAHCDFVKLRNMLIRTHMHDLKDVTCDVHYENYRAQCIQQMTSKLTQDNRIESPIPI
LPLPTPDTETEKLIKMKDEELRRMQEMLQKMQQQMQDQ
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggattcgatcattatccaggagcggttagtggagaggctgctttccccccggacgcag
gcacagcgaagccacccggccaagctgaaggcaggagtggtggcacaccctgaccttctc
ctgcccgcctctgccctgcaggaccatgagaagcagtacgtgggctttgccactctgccc
aaccaggtccacaggaaatccgtgaagaaaggtttcgacttcaccctgatggttgcagga
gagtcgggtctgggcaaatccacgctggtgaacagcctgttcctgacggatctctacaaa
gacagaaagctcctcaatgcggaggagagaatcaaccagacagtggagattgtcaagcat
acggtggacattgaggagaagggcgtcaagctgaagctgaccatcgtggacacaccaggc
tttggagatgctgttaacaacactgagtgctggaagcccatcactgactacatcgaccag
cagtttgaacagtatttccgtgatgagagcggcctgaacaggaagaacatccaggacaac
cgagtgcactgctgcctctacttcatctcgccctttgggcacgggctgaggcctgtggat
gtcgagttcatgaaggctctgcatgagaaggtcaacatcgtgcctctcattgccaaagct
gactgcctgatcccatctgagatccggaagctaaaagagaggatccgggaagagattgac
aaatttggcattaaagtataccagtttcctgagtgtgactctgacgaagatgaggagttc
aagcagcaagatagagagctgaaggagagtgctccctttgctgtcatcggcagtaacaca
gtggtggaggcaaaaggccagcgagtccgtggaaggctgtacccgtggggcattgtggaa
gtggaaaatcaggcgcactgcgactttgtgaagctgcggaacatgctgatccggacacac
atgcacgacctgaaggatgtcacttgcgatgtccattatgagaactaccgagctcagtgc
atccagcaaatgaccagcaagctgactcaggacaacaggatagaaagcccaattcctatc
ctgccactcccaacaccggacactgagactgagaagctgattaaaatgaaggatgaggag
ctgcggcggatgcaagaaatgctgcagaagatgcagcagcagatgcaggatcagtga
DBGET
integrated database retrieval system
