Oxyura jamaicensis (ruddy duck): 118175145
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Entry
118175145 CDS
T11549
Symbol
SNRPD3
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3
KO
K11088
small nuclear ribonucleoprotein D3
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118175145 (SNRPD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oja03019
]
118175145 (SNRPD3)
03041 Spliceosome [BR:
oja03041
]
118175145 (SNRPD3)
03032 DNA replication proteins [BR:
oja03032
]
118175145 (SNRPD3)
Messenger RNA biogenesis [BR:
oja03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
118175145 (SNRPD3)
Spliceosome [BR:
oja03041
]
Complex A
U1 snRNP components
Sm proteins
118175145 (SNRPD3)
U2 snRNP components
118175145 (SNRPD3)
Complex B
U1 snRNP components
118175145 (SNRPD3)
U4/U6.U5 tri-snRNP components
118175145 (SNRPD3)
Complex C
U2 snRNP components
118175145 (SNRPD3)
DNA replication proteins [BR:
oja03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
118175145 (SNRPD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
118175145
NCBI-ProteinID:
XP_035196990
LinkDB
All DBs
Position
15:join(8724028..8724153,8724849..8725041,8725923..8725984)
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AA seq
126 aa
AA seq
DB search
MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQ
VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGSGAGRGKAAILKAQVAARGRGRGMGRGN
IFQKRR
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcggagtgccgatcaaagtgctgcacgaggcagaaggccacattgtgacatgc
gagaccaacacaggagaagtgtaccgagggaagcttattgaagccgaggacaacatgaat
tgtcagatgtccaacataacagtgacgtacagagatgggcgagtggcacagcttgagcag
gtgtacatcagaggcagcaagatacggtttctaattttaccggatatgttgaagaacgct
cctatgctgaagagcatgaagaataaaaaccagggttctggagctgggcgaggaaaagca
gctattctcaaagctcaggtggctgcaagaggaagaggtcgtggtatgggccgtggcaac
atcttccagaaacgaagataa
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