KEGG   Oxyura jamaicensis (ruddy duck): 118175148
Entry
118175148         CDS       T11549                                 
Symbol
CLIP1
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
  KO
K10421  CAP-Gly domain-containing linker protein 1
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:oja00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    118175148 (CLIP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oja03036]
    118175148 (CLIP1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oja04812]
    118175148 (CLIP1)
Chromosome and associated proteins [BR:oja03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Microtubule-associated proteins
     118175148 (CLIP1)
Cytoskeleton proteins [BR:oja04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Cytoplasmic linker proteins (CLIPs)
     118175148 (CLIP1)
SSDB
Motif
Pfam: CAP_GLY CLIP1 CLIP1_ZNF
Other DBs
NCBI-GeneID: 118175148
NCBI-ProteinID: XP_035196991
LinkDB
Position
15:join(2492009..2492102,2492550..2493118,2504688..2504812,2505861..2506077,2509346..2509543,2509720..2509823,2511570..2511630,2512593..2512625,2516638..2516742,2519787..2520731,2522148..2522264,2523286..2523343,2523586..2523669,2525169..2525325,2525954..2526119,2526215..2526430,2527470..2529755,2530920..2531057,2532182..2532288,2535358..2535478,2539050..2539102,2541513..2541533,2544210..2544327,2544618..2544774,2545335..2545384,2546234..2546239,2546793..2546917,2547584..2547806)
AA seq 2217 aa
MSMLKPSGLKAPSKTIKHGGTLLKTPASVAPAPAEKAASSEKPASTTTADAHDEFVDDFR
VGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLRGIFT
RPSKLTRKVLTEDEANGTQAAHASRATSPTSTSTASVVSSSPAALPPSGIPQKTTLAAKE
HSTPSQISNLSKTASESISNLSEAGSQKKGERELKIGDRVLVGGTKAGVVRFLGETDFAK
GEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTTPAKAKTTVRKV
IATPTALKRSPSASSLSSLSSVASSVSSKPSRTGLLTETSSRYARKISGTTALQEALKEK
QQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRDGHDRHVLEMEAKMDQLRAMVEAA
DREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLERKRQISEDPENTQTKLEHARIKEL
EQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLESSKHSD
DVDTSLSLLQEISSLQEQMAAVGKEHQREMNSLKEKFEISEEALRKEIKSLSASNEKMAK
ENESLKTKLDHANKENSDVTELWKSKLESAIASHQQAMEELKVSFSKGVGAQTAEFAELK
TQIEKVKLDYENEMSNLKLKQENEKSHHLKEIEALKAKLIAVTEEKEQNLESLKTKLESV
EDQHLVEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIGSLTQQIKASEEKLLDLDALQ
KANSEGKLEVQKLSKQLEAAEKQIQNLETEKVDESSKASNLAKELQGKEQKLLDLEKNLS
AVNQVKDSLEKELQILKEKFTSAADEAENVQQTMQETIKKLNQKEEQFALMSSELEQLKS
NLTVMEEKLKEREEREQQLTQAKVKLENDIAEIMKSSGDSSAQLTKMNDELRLKERQLEQ
IQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLMDMKKQIETNQN
QYKDLQAKYEKETSDMITKHDADIKGFKQNLLDAEEALKTAQKKNDELETQAEELKKQAE
QAKSLSSVLASARKEIELMSDKMRGLISEKETLAQEGNTLKLERGSLLSKLLELESKILS
MQQDQEELWTINEELNSENKKILKQKEEAEAKSQQESTEKVALISEKGKLLSEIEAAHAD
LLKITQANDALRSSESTLLQQLKKLQANNDAMDVARQKHIKEREELEHYQKKLLEENDAV
IKDKDDVIQKLKSSYDDLARDQRELLQQLSTLTAERDSAQDKHSDLKSAHTALKDERDHL
LHMSQSLQTEKEMLLKSIEELCLSSADTVSENQALKVRTEEMQTELESEHEELKKVMKDN
TELKASLASLTHLLEEIKSSRETSNSERIQLLREKEALSSSERRLLAEKEELLNENKVIT
EKLAKATADAMLAEKAFNEKINELNLEKESVFCKSLQFEKHNEALLKEKNELERKYSELL
DENKSATNAVSDTKREHELDISAKRVLAQENTTLQESIKALKEELNKMNLENQELVACKR
DLSDLLKEAQDAKRTLENALSALSRDKQVLSSSFKTCSTDLETLTRERTELQDKCQKLNG
ELENMRENLTIEKEARKLDKESFLLERLELQNNISFLEKEIEVMREKNKEFLTEKESLVQ
EKEKSETKLVEIIKEKEILCAETEQLASKIEQLKSDFNSLSTSKAELQDLHSCLSKMLDD
LQQKHEVTEKERNKLLQENENLLAEQKSLAVSKEEILKEKEKLSKNHYKLQEEVALLEHT
NIDLSGKLLVSEEKNQMLLEKVNNLALKLRESETLQAQTVMQKMEAVKMAEDVLQTVEKV
TKEKDAIHKEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKV
EELRKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLL
EMKKSLPSNTLRESTLKKEIDEERASLHKSISDTSALITQKDEELEKLRNEITVLRGENA
SAKTLQSVVKSLESDKLKLEEKVKNLEQKLKENNEPLTVTSPSGDIAANLLQDESLEEKQ
HEIDFLNSVIVDLQRRNEELNLKIQRMCEAALNGNEEETNNYDSEEESLSKKKPRLFCDI
CGCFDLHDTEDCPTQAQMLEEPPHSAYHGSRREERPYCDTCEMFGHWTADCNDDETF
NT seq 6654 nt   +upstreamnt  +downstreamnt
atgagtatgttaaaaccaagtggacttaaggctccttcgaagaccatcaagcatgggggg
acattactgaaaacacctgcatctgttgcacctgctccagcagaaaaagcagcttccagt
gaaaagcccgcaagtacaaccactgcagacgcacatgacgagtttgtggatgatttcaga
gttggggagcgtgtttgggtcaatggaaataaacctggctttattcagtttcttggtgaa
acgcagtttgctccaggacaatgggcagggattgttctagatgaaccaattggtaagaat
gatggctctgtggctggagttcgctatttccagtgtgaacccttgagaggaatatttaca
agaccatcgaaattgacaagaaaagtgctgacagaagatgaagccaatggtactcaggca
gctcacgcatctagagctacatcaccaacttccacatcgactgctagcgtggtgtcttcg
tcccctgctgcgcttcccccgtcaggaattccacaaaaaacaacacttgctgctaaggaa
cattcaactccttctcagattagcaatctttcaaaaactgcaagtgaatctatatcaaat
ctttctgaagctggatcacaaaagaaaggagaaagggagctcaaaattggagatcgagtt
ctggttggtggaacaaaagctggagttgtgcgtttcttgggagaaaccgactttgctaaa
ggagagtggtgtggagtagaactggatgaacctcttgggaagaacgatggagctgttgct
ggaacaagatattttcagtgtcagccaaaatatggtttgtttgctccagtccacaaagtt
acaaagattggattcccatcgactacaccagcaaaagcgaagacaaccgtgcgaaaagtg
attgcaactcccacggccctgaaacgtagtccgagtgcatcttccctgagctccctcagt
tctgtggcatcttcagtaagcagcaagccaagccgtacaggactattgacagaaacatcc
tcccggtatgcaagaaaaatttctggtaccacagccctacaggaggcactgaaggagaag
cagcaacatattgaacagctcctggcagaaagggacctggagagggcagaagttgcaaaa
gcaaccagtcacgtaggggaaatagagcaagaattagcacttgttcgagatggacacgat
cggcatgtactggagatggaagcaaaaatggatcagctacgagctatggtggaggctgct
gatagggagaaagtggagcttctcaatcagcttgaggaagagaaaaggaaagttgaagac
cttcagttccgtgtggaagaagaatccattaccaaaggagacctagagcgaaagaggcag
atttcggaagatccagaaaatacgcagaccaaactggagcatgcccgcattaaggagctt
gaacagagcctgctctttgaaaagaccaaagctgacaaactccagagggagttagaagac
actagggtggccacggtatcagaaaaatctcgcatcatggaactagaaagagatctagca
ttgcgggtgaaggaagtagctgagcttcgagggagactagagtctagtaaacacagtgat
gatgtggatacttctctttcgttgttacaagaaataagttctttgcaagaacaaatggca
gcagttggcaaagaacatcagagggagatgaattcactgaaagagaagtttgaaatcagc
gaagaagcactccggaaagagatcaaatcactttcagcttcaaatgagaaaatggcaaaa
gaaaatgaatcattgaaaactaagcttgatcatgccaacaaggagaattcagatgtaacg
gagctgtggaaatcaaagctggaatctgcaattgcctcccatcagcaagcaatggaagaa
ctaaaagtttctttcagcaaaggtgtaggggctcagacagcagaatttgcagagttaaag
actcaaattgagaaggttaaattagactatgaaaatgaaatgtcaaatttaaagctgaag
caggaaaatgaaaagtctcatcatttaaaagagatcgaagccctgaaagcaaaattaata
gcagtcacagaggagaaagagcaaaacctggaaagcttgaagaccaaactggaaagtgtg
gaagatcagcatctagtagaaatggaagacactttaaacaaattacaggaagctgaaata
aaggtaaaggagctagaggtactgcaagccaagtgcaatgaacaaaccaaagttattggt
agtcttacacaacagatcaaagcttctgaagaaaagcttttggaccttgatgcacttcag
aaagccaattctgaaggtaaattggaagtccagaaacttagcaagcagcttgaggcagct
gagaaacagatacagaatttagagactgaaaaggttgatgaaagtagcaaggctagtaat
ctggccaaagaactgcagggcaaagagcaaaagcttcttgaccttgagaaaaacttgagt
gcagtaaatcaagttaaagattctttggaaaaggaacttcagattttgaaagaaaagttt
actagtgcagctgatgaagcagaaaacgttcaacaaactatgcaagaaacaataaaaaaa
ctaaaccaaaaagaagagcaatttgcactcatgtcttcagaactggaacaactgaagtct
aatttgactgtgatggaggagaaactgaaggagcgagaagagagagaacagcaactgact
caggctaaagtcaaactagaaaatgacatagcagagatcatgaagtcatcaggggacagc
tctgcccagcttacaaaaatgaatgatgagctacggttaaaagaaaggcagttggagcaa
atacaacttgagcttacaaaagcaaatgaaaaggctgttcagcttcagaaaaatgtggaa
cagacagcacagaaagctgagcagagtcagcaagaaactctcaagactcatcaagaagag
ctgaaaaaaatgcaggatcaactaatggacatgaaaaagcaaatcgagactaaccaaaat
cagtataaggatcttcaggcaaagtatgaaaaagaaacttcagacatgatcactaaacat
gacgcagacattaaagggtttaagcagaacttgctggatgcagaagaggcgctgaaaact
gcacagaagaaaaatgatgagttggaaacacaggctgaggagctgaaaaagcaagcagaa
caggccaaatccttaagctctgtgttagcatcagccagaaaagagattgaactaatgtca
gacaagatgaggggtttgatatcagaaaaagagactctggcacaggaggggaatacttta
aaattagagagaggttcattattatcaaaacttctagagttggaatcaaagattttgtca
atgcaacaagaccaagaagagctttggacaataaatgaagaacttaattcagaaaacaaa
aaaatcctaaagcagaaagaagaagctgaggccaaaagccagcaggaaagcacagaaaag
gtagcactaatttctgagaaaggcaaattactctctgaaatagaggcagcacacgcagat
cttctgaagataactcaagcaaatgatgctctccggtcttcagagtcaaccttgctccaa
cagctgaaaaaacttcaggccaacaatgatgctatggatgtggcacgtcagaaacatatc
aaggaacgagaagaactagagcattatcagaagaaacttttggaagagaacgatgcagtc
attaaagacaaagatgatgtcattcagaagctgaaaagttcttacgatgacctggccaga
gatcaaagagagctactacaacaactgtcaactctgactgcagagagagattcggcccaa
gataagcactcggatcttaaaagtgcgcacacagccttaaaagatgaacgggaccatcta
ttgcacatgagtcagagtctgcagaccgagaaggagatgctccttaaaagtatagaagag
ttgtgcctgagttcagccgatactgttagtgaaaaccaggcattaaaagtgagaacagaa
gagatgcaaacagaactagagagtgaacatgaagaacttaaaaaggtgatgaaagacaat
acagagctgaaggcttcccttgctagtctcactcatcttcttgaggaaattaaatcctca
agagagacatccaactctgaacgtattcagttacttcgagagaaagaggctctttcttca
tcagaacgaaggcttttggctgaaaaggaggaacttctaaatgaaaataaggtaattact
gaaaagcttgctaaggccacagcagatgctatgcttgctgagaaagcctttaatgagaaa
ataaatgaattgaacttggaaaaggaatctgttttttgtaagtcactgcaatttgaaaaa
cacaatgaagctcttctgaaagagaagaatgaattggagagaaaatactcagagctcctt
gatgagaacaagtctgctacaaatgcagtttctgatacgaagagagaacatgagctggac
atctcagccaagagagttctggcccaagagaataccacactccaagagtccatcaaagct
ctcaaggaagagctaaataagatgaatctagaaaatcaagagctagtagcttgtaaacgt
gacctttccgatcttctgaaagaggcacaggatgccaaaagaacattagaaaatgcactg
tctgctctgtctcgtgacaagcaggtcctatcatcttcattcaaaacctgttctactgac
ctggaaacactgaccagagagaggaccgaattacaagataagtgtcagaaattaaatgga
gagcttgagaatatgagagaaaacttaaccatagaaaaggaagctagaaaactggacaag
gaatcatttttgttggaacgtctggagcttcaaaataacatcagcttcttagagaaggag
atagaagtgatgagagagaaaaataaagaatttctgactgagaaagaaagtctggttcag
gagaaagaaaaatccgaaactaaactggtggaaataattaaagaaaaagaaatcctctgt
gcagagacagagcagctggcttccaaaattgagcaactgaagagtgactttaattccttg
tctacatcaaaagcagagctccaggacttgcacagttgtctgtccaagatgctggatgat
cttcagcagaaacatgaggtgactgagaaagagagaaacaaattacttcaggaaaatgaa
aatctgcttgctgaacagaagagtctggccgtcagtaaggaagaaatactaaaagagaag
gagaaattgtccaagaaccattataagctgcaggaggaagtagcgctgttagagcacact
aacatagacctctcgggcaaactgctggtctctgaggaaaaaaatcagatgctgctggag
aaggtgaacaatctggctttgaaactaagagaaagtgaaactctgcaggcccagacagta
atgcaaaaaatggaggctgtcaaaatggcagaagatgttttacagactgtggagaaggtg
accaaagagaaggatgccattcacaaagaaaagattgaaactttggcttctttggagaac
tctagacagacaaatgagaagctgcagaatgagttggacatgcttaaacaaaacaacttg
aaaaacgaagaggaacttactaaatcaaaagagcttctaaacctagagaacaagaaagtg
gaagaacttcgaaaagaattcgaagcgctgaagctggcagctgctcagaagtcccagcag
cttgcagctttgcaagaggagaacgtgaaacttgccgaggagctgggcagaagcagggac
gaagtcacaagtcatcagaagctggaagaggagagatcagtactcaataaccagttatta
gagatgaaaaagagcttgcccagtaacactttaagagaatcaacattaaaaaaagaaatt
gatgaagagagagcatctttacacaaatccatcagtgatactagtgccttgatcacacag
aaagatgaagagctggaaaaactcagaaatgagatcacagtgcttcgtggagaaaacgcc
tctgcaaaaaccttacagtcagtggttaagtcactggagtctgataagttgaaacttgag
gaaaaggtgaaaaacttggagcaaaagctcaaggaaaacaatgagccattaactgtaact
agcccctcaggtgacattgctgctaacctacttcaagacgaaagcttggaagagaagcag
cacgagattgacttcctgaattcagtgatagtagatctgcaaaggagaaatgaagaactg
aacttgaaaatacaaagaatgtgcgaagcagccctcaacggcaatgaagaggagacaaac
aactacgacagtgaggaagaaagcctgtcgaagaagaagcctcgtctcttctgcgatatc
tgcggctgctttgaccttcacgacaccgaggactgtcccacccaggcgcagatgctggag
gagcctccccactcggcttaccacggcagcaggagggaggagcgcccctactgcgacacc
tgcgagatgtttgggcactggacagccgactgcaatgacgacgagaccttctag

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