KEGG T11549: 118175335

Oxyura jamaicensis (ruddy duck): 118175335

Entry

118175335         CDS       T11549

Symbol

RC3H2

Name

(RefSeq) roquin-2 isoform X1

K15690

RING finger and CCCH-type zinc finger domain-containing protein

Organism

oja Oxyura jamaicensis (ruddy duck)

Brite

KEGG Orthology (KO) [BR:oja00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oja03000]
    118175335 (RC3H2)
   04121 Ubiquitin system [BR:oja04121]
    118175335 (RC3H2)
Transcription factors [BR:oja03000]
Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    118175335 (RC3H2)
Ubiquitin system [BR:oja04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    118175335 (RC3H2)

SSDB

Other DBs

NCBI-GeneID:

118175335

NCBI-ProteinID:

XP_035197372

LinkDB

Position

17:complement(join(9774645..9774843,9775457..9775605,9776640..9776747,9777286..9777420,9777791..9777872,9778407..9778491,9778671..9778884,9779816..9779971,9781134..9781304,9781767..9782194,9783298..9783512,9784354..9784662,9785276..9785388,9785748..9785866,9786107..9786239,9786630..9786830,9787343..9787518,9788443..9788676,9789132..9789249,9790642..9790872))

AA seq 1191 aa
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI
GSPEATGKMVPSSNGIANLESGVPQLIPRCADTSLRALENTKKGGKTGANGQNVSGSPTE
SLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSQFVPRVPVYPPHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDMIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTGYDEQLRRKPEQW
AQYHTQKTPLVSSALHMATPSPTPPSPLFSVDFSTEFSESVSDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSSYGSDST
SSGRYAERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD
EGSRLTLNLLSKEIDLRNGETDYTEDCADAKPDRDIELELSALDTDEPDGQGEQIEEILD
IQLGISSQDDQLLNGTTVENGHPLKQHQKESMEQKRQSLGEDLVILEEQKTILPVTSCFS
QPITTSVSNASCLPISTSVSVGSLILKTAHIMSEDKNDFLKPVANGRMVNS

NT seq 3576 nt +upstreamnt +downstreamnt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaacgag
tttgatgagaatgtgcacaaacccatcagcttaggttgctctcacactgtctgtaagacc
tgcctgaacaagcttcatcgcaaggcatgtcctttcgaccagactgccatcaatacagac
atcgatgtgcttcctgtaaactttgcactcctccagttagttggagcccaggtacctgat
catcagacagtaaagttgagtaatgtaggagagaacaaacattatgaagtagcaaagaaa
tgtgttgaggatttggcactctacttaaagccattaagtggaggaaaaggtgttgctagc
ttgaatcagagtgcgctgagccgtccaatgcaaaggaagcttgtgacactagtgaattgt
caactggtagaggaagagggtcgggttcgagctatgagggcagctcgatcactgggagag
agaactgttacagaactgatcttgcagcaccaaaatcctcagcagctttctgccaacctt
tgggctgctgtcagagcacggggatgtcagtttctagggccagctatgcaagaagaagca
ctgaaacttgtattactggcattggaagatggctctgcgctttcaagaaaagttctggta
ctttttgtcgtgcaaagactagaaccaagatttcctcaggcctctaaaacaagcattggt
cacgttgtgcagctactgtatagagcatcatgctttaaggtcactaaaagggatgaagat
tcttctctgatgcaacttaaagaagagtttcggagttacgaggctttgcggagagagcac
gatgcccaaattgttcacattgccatggaagcaggacttcgaatatcaccagaacaatgg
tcttcccttctttatggtgacttggcacataaatcacacatgcaatccattattgacaag
ctccaatctccagagtcttttgcgaagagcgtacaagaattgacaattgtcttgcagcgc
acaggcgatcctgcaaacttaaacaggctcaggcctcatttggagctcctggcaaacata
gacccaaatccagatgcagcatctccaacatgggagcagctggaaaatgcaatggtggct
gtaaagactgtggtacatggattggtggatttcattcagaattacagtagaaaaggacat
gaaactccacagccacaaccaaatagcaaatataaaacaagtatgtgccgagaccttcga
cagcaagggggatgtccaagaggaaccaactgtacttttgctcattctcaggaggagctt
gaaaaataccgcctgaggaacaaaaaaatcagtgcaacagtgagaacattcccccttcta
aataaagtcggcgtaaatagcactgtctcgaccactaccggaaacgtaatttctgtcata
ggaagccctgaagcaacagggaagatggtgccgagtagtaacggaatagctaatctagaa
agtggtgttccccagttgatccctcgctgtgcagacacctccttgagagctttggagaac
accaagaagggagggaagactggagccaacggccagaatgtttcgggatcccctacagaa
tcactacctgaaaataaaattggttctccacccaagactcctgtaagccaggcagcagct
acctcagctggtcctcccaacattggaacagaagtgaactctgtgcctccaaaatccagc
cagtttgttcccagagtacctgtctaccctccacattctgataacgttcaatatttccaa
gatcccaggactcagttgtcatatgaagttccacagtacccacagacaggatattatcca
ccacctccaacagtaccagctggcgtggctccctgtgttcctcgctttgtgaggtccaat
aatgttccagaatcctccctcccacctgcttccgtgccatatgccgatcattacagtaca
tttccccctcgagatcgactgaattctccttaccaacctcctcctccgcagccgtatgga
ccagttcctcctgtcccttctggaatgtatgctccagtttatgacagcaggcgcatctgg
cgcccacagatgtatccccgagatgatatgattaggagcaattctttacctcccatggat
gtgatgcactcatctgtctatcagacatcattacgtgagagatacaactctttggatggg
tattactctgtggcttgtcaacccccaaatgaacagaggactgtgcctttaccaagggag
ccttgtggtcacttgaagactggttacgatgagcaattaagacggaagccagagcaatgg
gcacaataccacacacagaaaactcctcttgtgtcatcagcccttcatatggcaacacca
tctccaacaccaccttctcctctcttcagtgtagatttcagcacagagttctcagagagt
gtcagtgatttgagtggaactaaatttgaggaagaccatctctctcactattcaccgtgg
tcttgtggcactattggctcttgtataaatgctatcgactcagagcccaaggatgtgatt
gccaattcaaatgccgtgttaatggatttggacagcggggatgttaaaaggagagtgcat
ttatttgaaactcagagaagggcgaaggaagaagatcctataatcccatttagcgatgga
ccgatcatttccaagtggggtgcaatctccaggtcatcccgtacaggttatcacacaaca
gatcctattcaggccactgcttcccaaggaagtgcaactaagcccatcagtgtatcagat
tatgtcccttatgtcaatgctgttgactcgagatggagttcgtatggctcagattccact
tcatcaggacgttatgcagaacgggacagattcatagttacagatttgtctggtcacaga
aagcattccagcactggagatttattaagtattgaattacagcaggccaaaagtaactca
ttactacttcagagagaggcgaatgcactagccatgcagcagaagtggaattctctagat
gaaggcagtcgccttaccttaaatcttttaagcaaggaaattgatttgaggaatggtgag
actgattatactgaagactgtgcagatgcaaagccagatcgagacattgaattggagctg
tcagccctagatacagatgaacctgatgggcagggtgaacaaatagaagagattctggat
atacagctaggtattagttctcaagatgatcagctgctcaatggaacaactgtagaaaac
gggcatccactgaagcagcaccagaaagaatctatggaacagaagagacaaagtttaggt
gaagaccttgtgattctggaggagcagaaaacaatcctgcccgtaacttcttgcttcagt
cagccgatcacaacatctgttagcaatgcaagctgcctgcccatcagcacatcagtcagt
gttggcagcctcattttgaaaactgctcacattatgtctgaggataaaaatgacttttta
aagcctgttgcaaatggcaggatggttaacagctga

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