Oxyura jamaicensis (ruddy duck): 118175366
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Entry
118175366 CDS
T11549
Symbol
TPRN
Name
(RefSeq) taperin isoform X1
KO
K24164
taperin
Organism
oja Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oja03400
]
118175366 (TPRN)
DNA repair and recombination proteins [BR:
oja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Others
118175366 (TPRN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Phostensin
Phostensin_N
Motif
Other DBs
NCBI-GeneID:
118175366
NCBI-ProteinID:
XP_035197477
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All DBs
Position
17:join(1811068..1813215,1826748..1826928,1827388..1827518,1827879..1827941)
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AA seq
840 aa
AA seq
DB search
MSSAEPPPPLGAGPRAQPAWKREILERKRAKLAGAAGGETDPPAGAAARGSAAAAAMGER
LVVAESLGPLRENPFMRLESERRRLRQGLPGHGPEAARPLQQLLELYSAVPGIRTIRADN
ILIIESQPDAAAASCFADGDSLPGRRREPAAASPPRRPDPLRELLARQGAALAEIRAEQV
FIYEAAEPPEAAEPGTVSRLLEKFGQRPRGRRRRGGEALPGPAAAAATPRAGPVSPPPVP
GSPRAAVPPKAGPGSPRSSAPKTGPGPLPAVPGSPLPLPTSPRAATPQPLPAPPQPPASP
RAAAPQPPAPQAAPVSPRAVAPQAVPLHPQAPLAVPKAAAPQANCFLHKIGSNSFTVTPR
GLPPTSRVPEPPGRVSEPPGHVPKPIDRVPEPISHVPEPPGRIPKPIDCVPEPSGRSAPP
KGPTVPSTSAANARRPKPEEAEVAVSPPPSASLAPSATQPLSASAPRAGGSFEILPAPKP
DLAAIPAHDLQAQALAKLRLNSRNSFVFVPRREGGPALPAAQSTGVRPPPSSQQKVQKEP
PRVSAPEQEEPVASLPAPLDPLVPVTYIDDIVEPDSGELSPRVSLATRTGNLVDQPGGAG
PDLEMEFSSVPLYRPHSASPGLHQRGGNTFTVVPKRKPVASGPQTLTDAGGRPQREEEEE
EEESKGKGKAVENADGPQAGLSHKKRYPTVNEIEVIGGYLSLERSCMSKTGSRRKKMKIS
FNETSLQTMFEYPSESSLAEEEDEEEGHASESEEDKSRTFHIPRPNSTLHPSTPNSADLS
SYTPKHSVKFSEWQEQKYEEMPASERPLLKEADSHGNQVMLTPAEKGGLSDFSSEPALYF
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgccgagccgccgccgccgctcggggccgggccgcgggctcagcccgcctgg
aagcgggagatcctggagcgcaagcgggccaagctggccggggcggccggaggcgagacg
gatcccccggccggggcggcggcgcggggctcggcggcggcggcggcgatgggcgagcgg
ctggtggtggccgagagcctgggcccgctccgggagaaccccttcatgcggctggagagc
gaacggcggcggctgcggcaggggctgcccgggcacggccccgaagcggcgcggccgctg
cagcagctgctggagctgtacagcgccgtgccgggcatccgcaccatccgcgccgacaac
atcctcatcatcgagtcgcagcccgacgccgccgccgcctcctgcttcgccgacggggac
tcgctgccgggacgccgccgggagccggccgccgcctccccgccgcgccgcccggacccg
ctgcgggagctgctggcccgccagggcgccgcgctcgccgagatccgcgccgagcaggtc
ttcatctacgaggcggccgagccgcccgaggcggccgagccgggcaccgtcagccgcctc
ctggagaagttcgggcagcgaccgcggggccgccgccgccggggcggggaggcgctaccc
gggcccgccgccgccgccgccaccccccgggccgggccggtttccccgccgccggtgccg
ggctctccccgggccgcggttcccccgaaggcggggccgggctccccccgctcctcggcc
ccgaagacgggaccgggacccctgccggcggtaccgggctcccccctgcccttgccgacc
tccccccgggccgccaccccccagccgctgccggcgcccccccagcccccggcgtcccca
cgggctgccgccccccagcccccggctccccaggcggccccggtctcccccagggctgtg
gccccccaggcggtcccactccacccccaggcaccgctggccgtccccaaagctgcggct
ccccaggccaactgcttcctccacaagattggctccaactctttcaccgtgaccccccgg
ggtctgccccccaccagccgtgtccctgagccccctggccgtgtctctgagccccctggc
catgtccccaagcccattgaccgtgtccctgagcccatcagccatgtccccgagcccccc
ggccgtatccccaagcccatcgactgtgttcctgagccctccggccggagcgcaccaccc
aaggggccaacagtgccatccaccagcgctgccaacgccaggaggccaaagccggaggag
gccgaagtggctgtgtcgcccccacccagtgccagtctggcccccagtgccacccagccg
ctctctgcgtctgccccccgggctgggggctcctttgagatcctcccggcccccaagcct
gacttggctgccatccctgctcatgacctgcaagcgcaggccttggccaagctgcgcctg
aattcgcgcaactccttcgtattcgtgccccggcgggagggcggcccggctctgcctgcg
gcacagagcacgggagtgaggccgccgccatcctcgcagcagaaggtacagaaagagccc
ccaagggtttccgctccggagcaggaagagcctgttgcttccctgccggcgcctctggat
ccgttggtacctgtgacttacatcgatgacattgtggagccagacagcggggagctctcc
cccagggtcagcttggccacgaggacggggaacttggtggatcagcctggaggagctggc
cctgacctggagatggagttttcctctgtgcccctctacagacctcactctgcctcccct
ggcctccatcagagaggaggcaacaccttcactgtcgtgcccaaaaggaagcccgttgcc
tcggggccgcagactcttactgatgctggtggaaggcctcagcgggaggaagaggaggaa
gaggaggaaagcaaaggaaaaggcaaagctgtggagaatgctgatgggccccaggcgggg
ttgtcccataagaagcgctaccccactgtcaacgagatcgaagtgatcggtgggtacctg
tccctggagaggtcctgcatgagcaagacaggctcccgccgcaagaagatgaagatctcc
ttcaatgagacaagtttgcagaccatgtttgagtatccatcagagagctcgctggcagaa
gaagaggatgaagaggaaggacatgcttctgaatcagaggaggacaagtctcgcaccttt
cacattccacgcccaaatagcactttgcatcccagtacacctaactcagcagatctatcc
agctacaccccaaagcactctgtaaagttcagtgagtggcaggagcagaagtacgaggag
atgcctgcctccgagagacccctcctgaaggaagctgactcccatgggaaccaagtcatg
ctcactccagcagagaagggcggactctccgacttcagcagtgagcctgccctgtacttc
tga
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