Oxyura jamaicensis (ruddy duck): 118175442
Help
Entry
118175442 CDS
T11549
Symbol
GBGT1
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X1
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja00603
Glycosphingolipid biosynthesis - globo and isoglobo series
oja01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
118175442 (GBGT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oja01003
]
118175442 (GBGT1)
Enzymes [BR:
oja01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
118175442 (GBGT1)
Glycosyltransferases [BR:
oja01003
]
Glycan extension
FORS blood group (Forssman antigen)
118175442 (GBGT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_6
Motif
Other DBs
NCBI-GeneID:
118175442
NCBI-ProteinID:
XP_035197592
LinkDB
All DBs
Position
17:complement(join(7503646..7504324,7504767..7504901,7506968..7507003,7507104..7507154,7507825..7507887,7508676..7508737))
Genome browser
AA seq
341 aa
AA seq
DB search
MFSRKVVGSLVCLSVVITLIWITVGNGKVHYLPYYLPCPEIFSMKLQYTEEKPIQLFPQL
FYQQPRVLAPKRQDVLTVTPWLAPIIWDGTFSPEILDSAYRPLNLTIGVTAFAVGKYTRF
VGRFLESAEKHFMKGYRVNYYIFTDNAETIPNVQLQPGRRFVIVPVKKYPSWQEFSMRRM
EAINKHIAETSHQEVDYLFSLHIDMVFCNAWGPETLGDMVAAIHPGYFNVPRSQFPYERR
SSSAAYIPDGEGDFYYGGAVFGGLVRKVYEFTKTCHMTILTDKANKIMAAWKEESHLNRH
FLSHKPSKVLSPEYLWDDRKPKPPEIHLIRFSTVDKNYKEI
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgttttccaggaaagtggtgggatctcttgtctgtctatctgttgttatcacactcatc
tggattacagttgggaatgggaaagtgcactacctcccatattaccttccttgccctgaa
atcttctccatgaaactccaatacacagaagagaagccaatccagcttttcccccaatta
ttttatcagcagccaagagtactggccccaaagcgtcaggatgtgctaacggtcacgcca
tggctggcccccatcatctgggatggtaccttcagtcctgagatcctggacagtgcctac
cggccactgaatctcaccataggggtaacagcctttgccgttgggaaatacacaaggttt
gtgggccgcttcttggagtcagcggagaaacatttcatgaaaggctaccgggtgaactat
tatatcttcactgacaacgctgagacaatccccaacgtccagctgcaacctggccgaaga
tttgtcattgtccctgtcaagaagtaccccagctggcaggagttctccatgcgcaggatg
gaggccataaataagcacatagcagagacgagccaccaggaggtggactacctcttcagc
ctgcacattgacatggtgttctgcaacgcctgggggcctgagaccctgggtgacatggta
gcagccatacaccctggctatttcaatgtccctcgaagccagttcccatacgagaggagg
agctcttcagcagcctacatccctgacggagaaggggacttctactatggaggagccgtg
tttggagggctggtgaggaaggtctatgagttcaccaagacttgccacatgaccatcctg
acagacaaagccaacaaaatcatggcagcctggaaggaagaaagccacctcaacagacac
tttctctcccacaaaccctccaaagtactctctccagagtatttatgggatgacaggaag
ccaaagccccctgaaattcacctcatacgcttttccacagtggataagaactacaaagag
atatga
DBGET
integrated database retrieval system
