KEGG   Oxyura jamaicensis (ruddy duck): 118176081
Entry
118176081         CDS       T11549                                 
Symbol
NLE1
Name
(RefSeq) notchless protein homolog 1 isoform X1
  KO
K14855  ribosome assembly protein 4
Organism
oja  Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:oja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:oja03009]
    118176081 (NLE1)
Ribosome biogenesis [BR:oja03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    118176081 (NLE1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_Gbeta EIF3I Beta-prop_WDR36-Utp21_2nd WDR55 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_Aladin WDR90_beta-prop_4th DSE1_N Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd ASA1 Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_WDR36-Utp21_1st NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_IFT140_1st CFAP251_N Beta-prop_RIG_2nd NLE Beta-prop_EIPR1 Beta-prop_VPS8 Beta-prop_DCAF12 PAC11 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_NOL10_N Tricorn_2nd Beta-prop_HPS5 eIF2A TRM82_WD Ge1_WD40 RMC1_N WD40_RFWD3 PD40 Beta-prop_WDR75_2nd Beta-prop_NWD2_C Cytochrom_D1 FAD_binding_9 PALB2_WD40
Other DBs
NCBI-GeneID: 118176081
NCBI-ProteinID: XP_035198700
LinkDB
Position
19:join(7785519..7785524,7785730..7785873,7785956..7786173,7786270..7786349,7786614..7786690,7788050..7788147,7789306..7789498,7789648..7789783,7789993..7790039,7790190..7790392,7791341..7791500,7791590..7791660,7792146..7792158)
AA seq 481 aa
MAGTTPPEDVERLLIQFRDEAGEPLGSPFDVPVRITPGELQLVCNALLQEDEPVPLAFFF
RDAEIVVSLEKTLAGQAVETEKVLDIVYQPQAVFRVRAVTRCTSSLEGHTEAVISVAFSP
TGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLWD
PATGNQIGRVLAGHSRWITCLCWEPLHINPECRYLASASKDGSVRIWDTVMGRCDKILTG
HTQSVTCVKWGGDGLLYSSSQDRTIKVWRSQDGVLCRTLQGHAHWVNTMALSTDYVLRTG
AFEPAEATINPQDMSGSLAELKEKAQQRYEKVRGSGPERLVSGSDDFTLFLWKPAEDKKP
LERMTGHQALINQVLFSPDTRIIASASFDKSIKLWDGRTGKYLTALRGHVSAVYQIAWSA
DSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCLRIWR
R
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggcgggcacgacgcctcccgaggacgtggagcggctcctgatccagttccgtgatgag
gccggggagcccctggggtcccccttcgacgtcccggtccgcatcacgccgggcgagctg
cagctggtgtgcaacgcgctgctgcaggaggacgagccggtgccgttggccttcttcttc
cgcgatgccgagatcgtggtgtcactggagaagaccctggcagggcaggcggtggaaaca
gagaaggtcctcgacatcgtctaccagccacaggcggtgttcagggtgcgggcggtgacg
cgctgcaccagctccctggagggacacaccgaggccgtcatctccgtcgccttcagcccc
acgggaaagtacctggcaagtggctctggagacaccacagtccgcttctgggacctcagc
acagagacaccgcagttcacagccaaaggtcaccggcactgggtgctcagcatcgcctgg
tctcctgacggcaagaagctagcctcgggctgcaagaacagccagatatttctctgggac
ccagccaccggcaatcagatcggccgggttctcgccggccactccagatggatcacgtgc
ctgtgctgggagccgctccacataaacccggagtgccgctacctggcaagtgcctccaag
gatggcagcgtccgcatctgggacacggtgatgggcaggtgtgacaaaatcctgacaggc
cacacgcagtcggtgacgtgtgtgaagtggggtggcgatggcttgctctactcctcctcc
caggacagaaccatcaaagtctggaggagccaggacggcgtcctgtgccgcaccttgcag
ggccacgctcactgggtgaacaccatggcccttagcaccgactacgttctccgcactggt
gccttcgaacctgctgaagccaccatcaacccgcaggatatgagtggctccttggcagaa
ctgaaggaaaaggcacagcagaggtatgaaaaagtcaggggctcaggaccagagaggctc
gtctcagggtcagatgatttcacgctgtttctttggaagccagcagaagacaagaagcca
ctggagagaatgacaggccaccaggcactgattaatcaagtcctgttctcgccagacacg
cggataatagctagtgcttcctttgacaagtcgataaagctctgggatggcaggacagga
aagtacctgacggcgctgaggggacacgtctcggctgtgtatcagatcgcctggtcagcc
gacagccgcttgctggtgagcgggagcagcgacagcacgctgaaggtttgggatgctgag
acaaagaaactggccattgatcttcctggccatgcagacgaggtgtttgcaacagattgg
agcccagatggacaaagggtagcgagcggagggaaggataagtgtttgcggatatggcgt
agatag

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