Oxyura jamaicensis (ruddy duck): 118176274
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Entry
118176274 CDS
T11549
Symbol
LAMB4
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja04510
Focal adhesion
oja04512
ECM-receptor interaction
oja04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118176274 (LAMB4)
04518 Integrin signaling
118176274 (LAMB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118176274 (LAMB4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB4
LAMB1
Rod_CreS
DUF8003
CCDC39
TelK_muzzle
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
118176274
NCBI-ProteinID:
XP_035199080
LinkDB
All DBs
Position
1:complement(14649658..14693903)
Genome browser
AA seq
1827 aa
AA seq
DB search
MVVETAMQTTLSSTQRHEAWLALLSLLMRIRPQQAQDDCGAGSCHPAIGDLLLGRSKQLT
ASSTCGMKSPQKYCIIGYLEAEQKCFLCDSRYPYNPYTQHNSHMIENVITTFEPDRKKKW
WQSENGIDHVSIRLDLETLFQFSHLILTFKTFRPAAMLVERSTDFGQTWKAFRYFAQDCA
AYFPNISSGPAKGVGDVICDSRYSDIEPSTEGEVVLKALDPSFEIENPYVPYIQELITMT
NLRINFTKLHTLGDALLGRRHSDPLEKYYYAVYEVVVRGSCFCNGHASHCEPVQNLRGDA
FHQPGMVHGRCICHHNTEGVSCERCKGFYNDAPWRPAEGAQDNACKRCNCNGHSGRCHFD
MDVYQASGGVSGGVCEDCQDNTTGQHCDQCKLFFYRDPRKVISDPHACLPCSCDPEGTLH
NGMCETHTDPALGTVAGRCPCKENVEGVHCDRCRANHYGLSGSDPLGCQPCNCDASGTLP
FSICDPATGECLCQQFATGRRCEKCVVGYWGLGKSLYGCSPCDCDIGGSQNNLCSPEDGQ
CQCLPNIVSRQCNEPAPGYFFLPLDYYIYEAEHATPLSGSAPLVKPTALPRCDIYFQKQG
YEFMIENGKIVLNRSKKRSVRKAGLGQDAIQLGQGSAVTVVFRQPSAGRSVTWTGAGFAH
VLSGAGLRFAINNIPFAMDFDISIRYEPETLEDWLASVAVQPTGALSSQRCRTQGFSQEP
HVLALPAAKRIALLQTPVCLEPGTEYSVDVYFSQPSASGPEAKSFILIDSLGLIPRISSV
ENLCSKKDLDDYQKYRCIEIASEVGPHILPEACSRLIASMSARIHHGAVACKCNPQGSLN
ASCSRLGGQCHCKANVVGRCCDTCAAGSYGFGFHGCYPCECHPQGSVSSLCDQVTGQCAC
RQDVDGQHCSRCLPGYFGFPLCRPCPCNGYAELCDAVTGECLNCSRFTAGSRCERCMDRY
YGNPLKREPCRPCMCPGAPTSKRFFAHSCYQDSQTAQLVCNCLEGYSGQQCDECPSGFYK
KTGSPMEDCAPCPCNNNIDLTDPESCNRVTGECIRCLHNTHGAHCQFCKPGYFGSALAQD
CQICTCNLAGVLPAMCPGRDAACLCDPATGACPCLPNVVGATCNQCAPGYWDLASGKGCQ
LCDCEPKNTQSKQCDQLTGQCPCKLGYGGRRCDECEENYFGNPQVHCISCACNLEGTSQP
QCDKATGACNCRAGVTGWFCNQCGRGFEKDFPSCHQCHLCFAQWDAKITALTQTVQGLMR
FAASLEDKRGRMSSCDTRFKTFEDAISETERILKHHVLSLEALASIKDFHGYVQEKVAQI
GPLPRMLYEFPDLNENIEDIRQEADLVYKLLQQKRHLHHSFHYLNLKEAISNVRKHFEMS
LLAEEKSSGTTPVLRYSEYTRNMTLAVMSQQALKESNVLEQLKMIKIPDIQNLNEKICGV
PENLSCAAAACGGVLCRDSHGLGHCGGPNCGGALPLSSDAFRKAEETAVLLTNLTTQLRE
PENQYFQVESIRKMAEDTKLKGSLFNGELERAKNQIEVDQEITKEFIKKVKDFLLDESAP
PEDIEKVASYILEISLPLTPRELTSMLGKIRSIMAHCQKHKLNANKRNRKMEAAQTLLGE
AQDAEKAAKAFPPVREVKNKLKHVVNSQGHSTNTFIKLNEEIEGIRTQISQAENQLNKTG
DELNDFSAKQSEVEDGIATLRMKMLMNRNQATSARAGAEAAFKRAQKIDNEFAAIKRKYT
ILQDRLKAKGPPKATLAKVKQLKEEAEKLAEEIEKKIKRVTDLEKKLQDLNQTKQDKAEQ
LRQLEEQVIAITNEITEQESKYATCKS
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggttgttgaaacagccatgcagaccaccctgagctccacacagaggcatgaggcttgg
ctggccctgctgtcgcttctcatgcggataagaccccagcaggcacaggatgattgtggt
gctgggtcctgccacccagccattggggacctcctcctgggtcgcagcaagcaattaaca
gcctcatcgacctgtgggatgaagagccctcagaaatactgcattataggctacctcgag
gctgaacagaagtgctttctctgtgattccagatacccatacaatccctatacgcagcac
aacagtcacatgattgaaaacgttatcacaacttttgagcctgataggaaaaaaaagtgg
tggcagtcagaaaacggtattgaccatgtcagcatcagactggacctagaaactttattc
cagttcagccaccttatcctgacctttaagacatttcggcctgcagcaatgctggttgaa
cgctccactgacttcggacagacctggaaagcatttagatattttgcacaagactgtgca
gcttattttcccaacatctcttctggtccagcaaagggtgtgggggacgtcatttgtgat
tcaagatattcagacatcgagccctccactgaaggcgaggttgtcttaaaagctttggat
cccagctttgaaatagaaaacccatatgtgccatatatccaagagctcattacgatgaca
aacctaaggatcaatttcactaaactccatactctcggggatgctctgcttggaagaagg
cacagtgaccccctcgagaagtactactacgctgtctatgaggtggttgtgcggggcagc
tgcttttgcaatgggcacgccagccactgtgagcccgtgcagaatctgcggggtgatgcc
ttccatcagcccgggatggtccatgggagatgtatctgccaccataacactgaaggcgtg
tcctgtgaaagatgtaaaggcttctacaacgatgctccctggaggccagctgaaggggca
caagataatgcttgcaaacgctgtaactgcaatggccattctggcagatgccactttgac
atggatgtgtaccaagccagcggtggggtcagcggcggggtctgcgaggactgccaggac
aacaccacggggcaacactgtgaccagtgcaagcttttcttttaccgggacccacgcaaa
gtcatctcagaccctcacgcctgcctcccctgcagctgtgacccagaaggcacactgcac
aacggcatgtgcgaaacccacacggatcctgctctggggacggtggcgggtcggtgcccg
tgcaaggagaacgtggagggtgtccactgcgaccggtgcagggcgaaccactacgggctg
agcggcagtgaccctctgggctgccagccttgcaactgtgatgcctctggcactttgcct
ttctccatctgcgaccctgccaccggcgagtgcctctgccagcagttcgccacaggccga
cgctgtgagaaatgtgttgtgggatactgggggcttggcaagagcttgtatggctgttcc
ccgtgtgactgtgacatcggcggatcccagaataacttgtgctcaccagaggacggtcag
tgccagtgccttcccaacatcgtgagccgccagtgtaacgagccagccccaggctacttt
tttttacccctggactattacatttatgaagctgagcatgcaacgcccctttctggctct
gcacccttggttaaaccaaccgctcttccaaggtgtgacatctacttccagaagcaagga
tatgagttcatgattgaaaatggaaagattgtgttaaacaggagcaaaaaacgaagtgta
agaaaagctggacttgggcaggatgccattcagctgggacagggctcagctgtgacggtg
gttttcaggcagcccagcgctggccggtctgtcacgtggacaggagctggctttgcccat
gtcctcagtggagctgggctgagatttgccatcaacaacattccctttgctatggacttt
gatatctcgatccgttatgagcctgagaccttagaagactggctagcaagcgtcgccgtt
cagcccactggtgctttgtcaagtcaacgctgtagaacccaaggcttttcacaggagcca
catgtgttggctctcccagctgcgaagaggatcgctcttctgcaaactccagtctgtctg
gagccaggaacagagtattctgtggacgtgtatttctctcagccctctgcctctggccca
gaggctaaatcgttcatcttgattgactctcttggacttattcccagaatcagctctgtg
gaaaacttatgtagtaaaaaggatttagatgactaccaaaagtatcgctgcattgaaatt
gcatcagaagttggacctcacatcctgcccgaggcatgctcacggctgatagcgagcatg
tccgcccgcattcaccacggcgccgtcgcatgcaagtgcaatccccaagggtcgctaaac
gccagctgcagcagactgggggggcagtgtcactgcaaagccaacgtcgtgggacgctgc
tgtgacacctgtgctgcgggcagctacggctttggcttccatggctgctacccatgtgag
tgccacccgcaaggctcggtgagctcgctgtgcgaccaggtgacggggcagtgcgcctgc
cgccaggacgtcgatgggcagcactgcagccggtgcctacctgggtattttgggtttccc
ctctgccgcccatgcccgtgtaatggctacgcagagctttgcgatgcggtgactggcgag
tgcctgaactgcagcaggtttacggctggaagccgctgtgaaaggtgcatggatcgctat
tatggaaaccccctgaagagagaaccctgccgcccgtgcatgtgcccaggggcacctaca
agcaagaggtttttcgcacattcctgttaccaggactcccagactgcacaattagtctgc
aactgtctcgagggatattcaggccagcagtgtgatgagtgtcctagtgggttctacaaa
aaaacaggaagccccatggaggactgtgcaccatgcccctgcaacaacaacattgacctg
actgacccagagtcctgtaacagagtcaccggggaatgcatcaggtgtttgcacaacacc
cacggagcacactgccagttctgcaaacccgggtattttggctcagcccttgctcaggac
tgccaaatctgcacatgcaatcttgcaggtgttctccctgccatgtgcccagggagggac
gcagcctgcctgtgtgacccggccactggtgcttgcccctgcctgcccaacgtggtgggc
gccacgtgcaaccagtgtgcaccaggctactgggacctggctagcggaaaaggatgtcag
ctctgcgactgcgagccgaaaaacacccaaagcaaacagtgcgaccagcttacaggccag
tgtccatgtaagcttggctatggtggaagacgttgtgatgaatgtgaggaaaattacttt
ggcaatccccaggtgcattgcatttcatgtgcgtgtaacctggagggaaccagccagccc
cagtgcgacaaagccaccggcgcgtgtaactgccgtgctggtgtcacggggtggttctgc
aaccagtgtggccgtggcttcgagaaagactttccctcttgccatcagtgtcacctgtgt
tttgctcagtgggacgccaaaattactgccctcacccagactgttcaagggttaatgagg
tttgctgcaagtctagaggataaaagaggacgaatgtccagctgtgatacacgcttcaaa
acctttgaagatgccatttctgaaactgaaagaattttaaagcatcatgttctttcactg
gaggcactcgcaagcatcaaggattttcatggctacgttcaagaaaaagttgcacaaata
ggtccccttcctcgaatgctgtatgaatttcctgaccttaatgagaacattgaagatatt
aggcaagaagctgaccttgtctacaaacttctacaacagaaaagacatctgcatcacagt
tttcattacttgaacctcaaagaggccatcagcaacgttaggaaacactttgaaatgtca
ttgctggcagaagagaaaagcagcgggacaaccccagtcctaagatactcggagtacacc
aggaacatgacgctcgctgtgatgagccagcaggccttgaaagaaagcaacgtgctggag
cagctcaagatgatcaagatccctgacatccaaaacttaaatgaaaagatctgtggggtg
ccagagaacctgtcctgtgctgcagcagcctgtggtggagtgttgtgccgggacagccat
ggactcgggcactgtggtggcccaaactgtggcggagctcttcccctctcctccgatgca
ttcaggaaggctgaggagactgctgtcctgttaactaacctgactactcagctacgggaa
cctgagaatcagtatttccaggttgaaagcatcagaaagatggcagaagacaccaagctg
aaaggttcgctgtttaatggggaactggagagagctaagaaccagattgaagttgaccaa
gaaatcacaaaggagttcatcaaaaaagtgaaagacttcttgttagatgagagtgcgcct
ccagaagacattgagaaggtggcgagttatatcctggaaatcagcctgcccctgactcca
cgagagttaacgagcatgcttggcaaaatccgaagcattatggcccactgtcagaagcac
aaactgaatgcaaataagagaaacaggaagatggaagcagctcagacactgctgggggag
gcacaagatgctgagaaagcagctaaagcttttccacctgtgcgtgaagttaagaacaaa
ctaaaacatgttgtgaactcccaaggacactccacaaacaccttcataaagttgaatgaa
gagatagaaggaatcagaacacaaatctcacaggctgagaaccaactgaacaagacaggc
gatgaactcaatgacttttcagcaaaacagtccgaggtagaagatggaattgccacattg
cggatgaaaatgctgatgaacaggaatcaagctacgagtgcaagagcaggggccgaagca
gcattcaagcgagctcagaaaattgacaatgaatttgctgccattaaaaggaagtacacc
attcttcaagacaggctgaaagccaaaggacctccaaaagcaactctagcgaaagtgaag
cagctgaaagaagaagcagaaaaactggctgaagagattgaaaaaaaaattaagagagta
acagatttggagaagaagctccaggacctgaatcaaacgaagcaagacaaggcagagcaa
ctcagacaactagaggaacaagtgatagccatcacaaatgaaattacagagcaggaaagc
aagtatgcaacgtgcaaaagctaa
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