KEGG   Oxyura jamaicensis (ruddy duck): 118176296
Entry
118176296         CDS       T11549                                 
Symbol
STX1A
Name
(RefSeq) syntaxin-1A
  KO
K04560  syntaxin 1A
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:oja00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    118176296 (STX1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oja04131]
    118176296 (STX1A)
Membrane trafficking [BR:oja04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    118176296 (STX1A)
SSDB
Motif
Pfam: Syntaxin SNARE Syntaxin_2 ATG17_like Spectrin_Anc-1 Prominin GNVR Lzipper-MIP1 Dcst2 ARM_ECM29 Ferritin DUF5856 YtxH EcoEI_R_C PspA_IM30 EsxC CC4_CEP85 Med9 ETRAMP Relaxase_C
Other DBs
NCBI-GeneID: 118176296
NCBI-ProteinID: XP_035199112
LinkDB
Position
19:complement(75807..192856)
AA seq 288 aa
MKDRTGELRAAKDSDDDDEVTVSVDRDRFMDEFFEQVEEIRGFIDKISENVEEVKRKHSA
ILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQH
STLSRKFVEVMSEYNATQTDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFSSG
IIMDSNITKQALNEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHS
VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTFGGIFG
NT seq 867 nt   +upstreamnt  +downstreamnt
atgaaggacaggaccggggagctgcgcgctgcgaaggacagtgatgatgatgatgaagtc
accgttagcgtggaccgggaccgcttcatggatgagttctttgaacaggtagaagaaatt
cgagggttcattgataaaatctcagagaacgtggaggaagtgaagaggaagcacagtgcc
attcttgcttcacccaaccctgatgagaaaacaaaggaagagctggaagagctgatgtct
gacataaaaaagacagcaaacaaagtgcgctccaagctaaagagtattgagcagagcatt
gaacaagaagaaggactgaacaggtcatctgctgacctgaggataaggaaaactcagcac
tcaacgctgtcgcgcaagtttgtagaagtgatgtctgagtacaacgccacgcagactgac
taccgggagcgctgcaagggcaggattcagaggcagctggagatcactggcaggaccacc
accagtgaggagctggaggacatgctggagagcggcaacccagccatcttctcctctggg
atcattatggattcaaacatcaccaagcaggcactgaatgagattgagacacggcacagt
gagatcatcaagctggagaacagcatccgagagctgcatgacatgttcatggacatggcc
atgctggtggagagccagggtgagatgattgaccgcattgagtacaacgtggaacactct
gtggactacgtggagcgggctgtgtctgacaccaaaaaagcagtgaagtaccagagcaaa
gccagacggaagaagatcatgatcattatctgctgtgtgatcctgggtattgtcattgcc
tctaccttcggcggtattttcggatag

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