KEGG   Oxyura jamaicensis (ruddy duck): 118176407
Entry
118176407         CDS       T11549                                 
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
  KO
K05037  solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja04082  Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:oja00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04082 Neuroactive ligand signaling
    118176407 (SLC6A4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:oja02000]
    118176407 (SLC6A4)
Transporters [BR:oja02000]
 Solute carrier family (SLC)
  SLC6: Sodium- and chloride-dependent neurotransmitter transporter
   118176407 (SLC6A4)
SSDB
Motif
Pfam: SNF 5HT_transport_N PRONE DUF8620 Hydrophobin_2
Other DBs
NCBI-GeneID: 118176407
NCBI-ProteinID: XP_035199276
LinkDB
Position
19:complement(join(7085091..7085165,7085924..7086091,7088819..7088919,7089284..7089383,7090502..7090633,7091406..7091518,7091602..7091729,7092462..7092565,7094443..7094577,7094962..7095100,7095526..7095745,7096428..7096562,7097251..7097713))
AA seq 670 aa
MEKKATSNETQLLTSKKDVSGCNEGEDCKENGLLIRNPKSALRLVEDGNKVHPSQGDKEE
AAPISNGYSGVQSSGPCNGMGGVEDAQCTAPAATTTTTTTTSTTCGAEGQQQLMELEDRE
TWSKKIDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMAIFGGIPLFYMELALG
QYHRNGCISIWRKICPIFKGIGFAICIIDLYVASYYNTIMAWAFYYLVSSFTTELPWTSC
TNAWNTGNCTNYFSKDNVSWTLYSISPAEEFYTRQVLQVHRSNGLDDLGGISWQLTLCLL
LIFTIVYFSIWKGVKTSGKVVWVTATFPYIILFILLVRGATLPGAWRGVLYYLKPDWQKL
LATEVWVDAAAQIFFSLGPGFGVLLAYASYNKFHNNCYQDALVTSTVNCLTSFVSGFVIF
TVLGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTF
AGLEGVITGVLDEFPHVWSKRRELFVLGLIIICFLGSLATLTFGGAYVVKLFEEYATGPA
VLTVVFLEAVAVAWFYGITQFCNDVKEMLGFAPGWYWRVCWVAISPIFLLFVTCSFLSNP
PELRLFDYNYPYWTTVVGYCIGTSSIICIPIYMVYRLIVTPGTLKERILKSITPETATEI
PIGDIRMNAV
NT seq 2013 nt   +upstreamnt  +downstreamnt
atggaaaaaaaggcaacgagcaatgagactcagctgctgacttccaagaaagatgtctca
ggctgcaacgaaggagaagactgcaaagagaacggacttctgatcaggaaccctaaatct
gccctgcggctagtggaggatgggaacaaagtccatcccagccagggagataaggaggag
gcagctccgatctcaaatggttattcaggggttcagagctctggtccttgcaatgggatg
ggaggggtggaagatgcccagtgcactgcccccgcagccacgaccaccaccacgaccacc
acctccaccacctgcggagctgagggccagcagcagctgatggagctggaagacagagag
acctggagcaaaaaaattgactttctgctctctgtcatcgggtacgcagtggatctggga
aatgtgtggagatttccttacatatgctatcaaaacggaggaggagcattcctcattccg
tacacaattatggccatctttggaggtattcctctcttctacatggaactagcgttagga
cagtaccacaggaatgggtgcatctcaatctggagaaaaatatgtcccattttcaaagga
attggctttgccatctgtataatcgatctttacgtggcctcctactacaacaccattatg
gcatgggccttttactacctcgtgtcctccttcacgacggagctgccgtggaccagctgc
acaaacgcctggaacacgggcaactgcacgaactacttcagcaaggacaacgtcagctgg
accctgtactccatctctcctgcagaagaattttatacccgccaagttctacaggtgcat
aggtccaatgggctggatgacctggggggcattagctggcaattgaccctctgtttattg
ttaatcttcaccattgtatacttcagcatctggaaaggggtcaaaacatctggcaaggtg
gtgtgggtgaccgccaccttcccgtacatcatcctcttcatcctgctagtgagaggtgca
actctgcccggagcctggagaggtgtcctctactacctgaaaccggactggcagaaactc
ctggccactgaggtttgggtggatgcagcagctcagatttttttctcccttggtccaggc
tttggggtcctattggcttatgccagctacaacaagttccataacaactgctaccaagac
gctctggttaccagtaccgtgaactgtctgactagttttgtgtctggatttgtcattttc
actgtgctgggatacatggctgagatgaggaatgaagacgtatcggaagttgccaaagac
actggacccagtctgctcttcattacctacgccgaggccattgcaaacatgcctgcttca
actttctttgccatcatatttttcctgatgttactcacgctgggattagacagcacgttt
gcgggactagaaggagtgattactggagtactggatgaattccctcatgtctggagcaaa
cgcagggaattgtttgtcctcggcctgatcatcatttgctttttggggtcgttagcaacc
ctgacatttggaggcgcgtatgtggtgaagctgtttgaagagtatgccaccggcccagct
gtcctgacagtggtgttcctggaagcggttgctgtggcctggttctacggcatcacccag
ttttgcaacgatgtgaaggaaatgctcggctttgccccaggctggtactggcgagtttgc
tgggtagcaattagccccatcttccttttgtttgtcacttgcagctttctttccaaccct
cctgagctacggctttttgattataattacccctactggaccacagtggtgggttattgc
ataggaacctcttctatcatctgcattccaatctacatggtttatcggctgatcgtcact
ccaggaacacttaaggagcgtattctgaaaagcatcactccagaaacagctacagaaatt
cctattggagacatccgcatgaacgcagtttaa

DBGET integrated database retrieval system