KEGG   Oxyura jamaicensis (ruddy duck): 118176415
Entry
118176415         CDS       T11549                                 
Symbol
GTF2IRD1
Name
(RefSeq) general transcription factor II-I repeat domain-containing protein 1 isoform X1
  KO
K27274  general transcription factor II-I repeat domain-containing protein 1
Organism
oja  Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:oja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oja03021]
    118176415 (GTF2IRD1)
Transcription machinery [BR:oja03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     118176415 (GTF2IRD1)
SSDB
Motif
Pfam: GTF2I Beta-prop_EML_2 Ustilago_mating
Other DBs
NCBI-GeneID: 118176415
NCBI-ProteinID: XP_035199289
LinkDB
Position
19:complement(join(3041605..3041679,3042339..3042475,3043426..3043463,3043809..3044001,3045338..3045415,3048588..3048635,3052922..3052950,3053598..3053781,3054579..3054662,3055522..3055587,3055787..3055845,3056757..3056940,3058018..3058083,3058595..3058657,3059026..3059115,3060729..3060809,3061969..3062006,3064956..3065076,3067396..3067421,3068442..3068625,3069377..3069460,3070266..3070355,3070838..3071148,3072296..3072479,3076053..3076199,3079175..3079316,3081176..3081298))
AA seq 974 aa
MALAGKPLDVTLSSSRPEQWNMVFPQKDEIITSLVSALDSMCSALSKLNAEVACIAVHDE
SAFVVGTEKGRVFLSARKELQADFQKFCRVQQRREQDAEAQKKAKECGRSVLRVSPDQGS
DVYLLRKMVEEVFDVLYSEAVGKSSVVPLPYERFLKEPGLLAVAGLPEGISFKKPMEYDV
KSLMAILEHSHSIRFRLKRPADEPSREPNPSVDLTCTSLAPKGSRDTGANGHMAKPSGQD
APSAVAVTNFLYGVSLPTQIAVDLKQEVSSGLHGATAASEALLPRPSGELKVPSSQEYSD
CCGQKSSVSGGPLIQNVHSSKRILFSIVHDKTDKWDSFIKETEDINTLRECVQILFNSRY
AEALGLDHMVPVPYRKIACDPEAVEIIGIPDKIPFKRPCTYGVPKLKRILEERHNIHFVI
KRMFDERIFTGSKFTKDPTKLEPCSPPGEISPEPHRGAVLDLAGTSQASSRSEKCSVSES
CEPGTSGELGGIRQIKIEPDELDIIQITVPDRSPTSDEMHDPVTTHMASEESSYILDAVA
AGTEKGPGEESRHEEKQMEGADGIGDVLSHLRKQVEILFNTRYAKAIGISEPVKVPYSKF
LMYPEDLFVVGLPEGILLRRPNCFGIAKLKKILQASNNIQFVIKRPELLAEGIKEMASDS
PGTKAAGERDCGDTLLDDAVKRQGFQENYDARLSRIDIANTLREQVQDLFNKKYGEALGI
KYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIKFTVTRPFQG
LIPKPAPRRITSLEKAYAALNDEDDANRLGEKVILREQVKELFNEKYGEALGLNRPVMVP
YKLIRDSPDAVEVTGLPDDIPFRNPNTYDIHRLEKILKARESIRMVIINQLQPFSEICTE
AKQTEKDSSVPKRKRKRISEGNSVSSSSSSSSSSSSNMESTSSTNQISLVQWPMNMYMLD
YGGLNVQIPGPINY
NT seq 2925 nt   +upstreamnt  +downstreamnt
atggcactggccgggaagcctctagacgtgaccctcagcagctccaggcctgagcagtgg
aacatggttttcccccagaaagacgaaatcatcaccagcttagtgtctgccttagactcc
atgtgctccgcgctctccaagctgaacgccgaggtggcctgcatcgccgtgcacgacgag
agcgccttcgtggtgggcaccgagaagggcagggtcttcctcagcgccaggaaggagctg
caggccgacttccagaagttctgccgagtccagcagcggagggagcaggacgcagaggcg
cagaagaaggcaaaggagtgtgggcgaagcgtgctcagggtctccccggaccagggatca
gacgtgtacctcctcaggaagatggtagaggaagtgtttgatgtgctttatagtgaagcg
gtggggaagagcagcgtggtccccttgccctacgagcggttcctgaaagagccgggactg
ctggcggtggccggcttgcccgaggggatcagctttaagaaacccatggagtacgacgtg
aagtccctgatggccattttagagcacagccacagcatccgcttcaggctaaaaaggccg
gcggacgagcccagcagagagccgaaccctagcgtagacttgacttgtacctccctcgcg
cccaagggcagccgggacactggtgccaacggccacatggccaaaccctccggccaggac
gctccctccgccgtagccgtgaccaatttcttatacggtgtctcgctgcctacgcagatt
gctgtggacctaaagcaagaagtgtcctccggtctgcacggggcgaccgcggccagcgag
gcgctgctgcccaggccctcaggagagctgaaggtgccttcctcacaggagtacagcgac
tgctgtggacagaaatcatccgtctctgggggccctctcatccagaatgtgcactcgtcc
aagcgcatcctcttctccatcgtccatgacaagacagataagtgggacagttttataaaa
gaaactgaagatatcaacacccttagggagtgcgtgcaaattctgtttaacagcagatat
gctgaagccttggggttagaccacatggtccctgtcccataccggaagatcgcgtgcgac
cccgaggcggtggaaatcatcggcatccctgacaaaatccccttcaaaaggccttgcacc
tacggcgtccccaaactcaagcggatactggaggagaggcacaacatccactttgtcatc
aagaggatgttcgatgagagaattttcacaggaagtaaatttaccaaagacccaaccaag
ctggagccctgcagcccccctggggagatctcccccgagccgcaccgcggggccgtgctg
gacctggcggggacgtcgcaggccagcagcaggtcggagaaatgcagtgtttctgaaagc
tgtgaaccaggtacctcaggagagctgggtggcatcaggcagatcaaaatcgagccggac
gagctggacatcattcagatcactgttccagaccgatcacccacctcggatgagatgcac
gacccggtgaccacgcacatggcctcggaggagtcgagctacatcctagacgcagtagca
gcagggaccgagaaggggcctggtgaggagtcacggcatgaggagaagcagatggaggga
gcagatggtataggggacgttttaagtcatttgaggaaacaagtggaaattttgttcaac
acgagatacgcgaaagccataggaatatcggagccagtcaaagtcccctactccaagttc
ctgatgtaccccgaggacctgttcgtcgtaggcttgccggagggcatcctgctacggcgc
cccaactgcttcgggattgccaagctgaagaagatcctgcaagcgagcaacaacatccag
tttgtcattaaaaggccagagctgctggcggagggcattaaggagatggcatcggacagc
ccaggaaccaaagctgccggcgagagggactgcggtgacacgctgctggacgacgccgtg
aagaggcagggcttccaagaaaattatgatgccaggctttccagaatagacattgctaac
acactgcgggaacaagtccaggacctgttcaacaagaaatacggtgaagccttggggatc
aaataccccgtacaagtgccatacaagcggatcaaaagcaatccagggtcagtgatcatc
gaggggctgccccccggcatccccttccgcaagccctgcacctttggctcccagaacctg
gagaggatattggccgtggccgataaaatcaagttcacagtgacgaggccttttcaagga
ctcatccccaaacccgcccctagacggataacgtcattggaaaaagcgtacgctgccttg
aatgatgaggacgacgccaacaggcttggagagaaggtgatcctccgagagcaagtgaaa
gagcttttcaatgaaaaatacggagaggctctgggcttgaaccgtcccgtcatggtgccc
tataaactcatcagggacagccccgacgcggtggaggtcaccggcctgccggacgatatc
cctttcagaaaccccaatacctacgacatccaccggctggagaagatcctgaaggcacgg
gagagcatccggatggtgattataaaccagctccagcctttttctgaaatctgcactgag
gccaaacaaacagaaaaagacagcagtgttcccaagaggaagcggaagaggatctccgaa
gggaactcagtatcttcctcttcctcatcttcctcctcctcctcttccaatatggagtcc
acgtcatcaacaaatcagatctctcttgtgcaatggcccatgaacatgtacatgttagac
tatggtggtctaaacgtccagatcccaggacctattaactattag

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