Oxyura jamaicensis (ruddy duck): 118176519
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Entry
118176519 CDS
T11549
Symbol
SDC4
Name
(RefSeq) syndecan-4
KO
K16338
syndecan 4
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja04512
ECM-receptor interaction
oja04514
Cell adhesion molecule (CAM) interaction
oja04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118176519 (SDC4)
04514 Cell adhesion molecule (CAM) interaction
118176519 (SDC4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118176519 (SDC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oja00535
]
118176519 (SDC4)
Proteoglycans [BR:
oja00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
118176519 (SDC4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
118176519
NCBI-ProteinID:
XP_035199426
LinkDB
All DBs
Position
20:complement(join(1765135..1765286,1766501..1766684,1766933..1766985,1767894..1768035,1781237..1781302))
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AA seq
198 aa
AA seq
DB search
MPLLRVALLLLGLLLASAAAESVRETETMDARWLDYPGSGDLPDDEDIGKFKPSSTSDGL
DTDETSGSGDYPDSEDAIYLTTMDTPLISDNYIPGDMERKIEGEKKNTMLDNEIIPDKAL
PVEENLSNKISMASTANSSIFERTEVLTALIAGGAVGLLFAVFLILLLVYRMKKKDEGSY
DLGKKPIYKKAPTNEFYA
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctccgcgtcgccctcctcctgctcggcctcctcctggcctccgccgccgcc
gagtcggtgagagaaaccgagaccatggatgcacgatggcttgactaccctggttctgga
gacctgccagatgatgaagacatcggcaaattcaaaccttcctcaacttccgatgggtta
gatacagatgagacgtctggttctggagactacccagattctgaagatgctatttatctg
acgaccatggatactcctctgatatctgacaactatatccctggagatatggagagaaag
atagaaggtgagaagaaaaacacgatgctggacaatgaaatcattccagacaaagcttta
cctgttgaagagaacctgtccaacaagatctccatggcaagcacagccaacagcagcatc
tttgaaagaacagaagttcttacagccctcattgcaggaggggcagttggcctcctgttt
gctgtcttcctgatccttctcttagtctatcgcatgaagaaaaaggatgaaggcagttac
gaccttggaaagaaaccgatctacaagaaagcccctacaaacgagttctacgcttaa
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