Oxyura jamaicensis (ruddy duck): 118176620
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Entry
118176620 CDS
T11549
Symbol
TUBB1
Name
(RefSeq) tubulin beta-1 chain
KO
K07375
tubulin beta
Organism
oja
Oxyura jamaicensis (ruddy duck)
Pathway
oja04145
Phagocytosis
oja04517
IgSF CAM signaling
oja04540
Gap junction
oja04814
Motor proteins
oja05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118176620 (TUBB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
118176620 (TUBB1)
09144 Cellular community - eukaryotes
04540 Gap junction
118176620 (TUBB1)
09142 Cell motility
04814 Motor proteins
118176620 (TUBB1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118176620 (TUBB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oja03036
]
118176620 (TUBB1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oja04812
]
118176620 (TUBB1)
04147 Exosome [BR:
oja04147
]
118176620 (TUBB1)
Chromosome and associated proteins [BR:
oja03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
118176620 (TUBB1)
Cytoskeleton proteins [BR:
oja04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
118176620 (TUBB1)
Exosome [BR:
oja04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118176620 (TUBB1)
Exosomal proteins of colorectal cancer cells
118176620 (TUBB1)
Exosomal proteins of bladder cancer cells
118176620 (TUBB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
118176620
NCBI-ProteinID:
XP_035199588
LinkDB
All DBs
Position
20:11065628..11069140
Genome browser
AA seq
448 aa
AA seq
DB search
MREIVHLQIGQCGNQIGAKFWEVISDEHGIDIAGNYRGDASLQLERINVYFNEAYSHKYV
PRSILVDLEPGTMDSVRSSKIGPLFRPDNFIHGNSGAGNNWAKGHYTEGAELIENVMDVV
RNECESCDCLQGFQLIHSLGGGTGSGMGTLLINKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNAILSIHQLIENTDETFCIDNEALYDICFRTLKLTNPTYGDLNHLVSLTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALSVPELTQQMFDARNMM
AACDPRRGRYLTVACIFRGRMSTREVDEQLLAVQTKNSSYFVEWIPNNVKVAVCDIPPRG
LKMAATFIGNNTAIQELFIRVSEQFSAMFRRKAFLHWYTGEGMDEMEFSEAEGNTNDLVS
EYQQYQDATADVEEYEEVEAEASPEKET
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaatcgtgcatcttcagattggccagtgtggaaaccaaattggagcaaagttc
tgggaggtgataagtgatgaacatggaattgatatcgctggaaactaccgtggggatgca
tcactgcagcttgagcgaattaatgtgtacttcaacgaggcttactcccataaatacgtg
ccccgttctatcttggtggacctggaacctggtacaatggacagtgtacgctccagcaaa
ataggcccgctatttcgacctgacaattttattcatggtaattcaggtgctggaaacaac
tgggctaagggccattacacagagggagctgaactgattgaaaatgtcatggatgtggtc
aggaacgagtgtgagagctgtgactgccttcagggattccagctcatccattcacttgga
ggtggtacaggctcgggtatgggcacactcctcatcaacaaaatcagagaagaatatccg
gacaggattatgaacaccttcagtgttgtgccttcccccaaagtatccgacacagtcgta
gagccgtacaatgccatcctctccatccaccagctaatagagaatacagatgaaaccttt
tgcattgacaacgaagcgctgtacgatatatgtttcagaactttaaagctcaccaatccc
acctatggtgacctcaatcacttagtgtccctaacgatgagcggtgtcacaacctcgctc
cgttttcctggccagctgaacgcagacctgcggaagctggctgttaacatggtgcccttt
cctcgcctgcatttcttcatgccaggctttgctccactgacggctcgaggtagccaacag
tacagagccctctcggtgccagagcttactcaacaaatgtttgatgcacgcaacatgatg
gcagcctgtgacccccgtcgtgggcgttacttgactgtggcttgcatcttcagaggccga
atgtctaccagagaagtggacgaacagttgctggctgtccagaccaagaacagctcctac
tttgtggagtggatccctaacaatgtcaaagtggctgtgtgtgacataccgccgcgagga
ctgaagatggcagctacctttattggcaataacacagccatccaggagctcttcatcagg
gtttctgaacagttctcagctatgttcagaagaaaagcctttctccactggtatactggt
gaaggcatggatgagatggagttttctgaagcagagggaaacaccaacgaccttgtttct
gagtaccaacagtaccaagatgccactgcagatgttgaggaatatgaagaggtagaagcg
gaagctagtccagaaaaggaaacataa
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integrated database retrieval system
