Oxyura jamaicensis (ruddy duck): 118176653
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Entry
118176653 CDS
T11549
Name
(RefSeq) interferon regulatory factor 4-like
KO
K09445
interferon regulatory factor 4
Organism
oja Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oja03000
]
118176653
Transcription factors [BR:
oja03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
118176653
SSDB
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Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
MH2
Motif
Other DBs
NCBI-GeneID:
118176653
NCBI-ProteinID:
XP_035199646
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All DBs
Position
20:complement(join(14987547..14987687,14987779..14987897,14988057..14988452,14988527..14988628,14988923..14989013,14989117..14989160,14989440..14989629,14989892..14990065))
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AA seq
418 aa
AA seq
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MAEPGSPMRLKEWLIAQIDSGRYPGLRWEDGRRTLFRIPWKHAAKQDYRQQQDAALFRAW
AVYKGKYHEGTDKADPSTWKTRLRCALNKSTDFQEVPERSQLDISEPYKVYQIVSDGARD
AENDGGPQPPAGEDPQGRAAGSPAEEGVRGAGGSVLPLLSAHPAERGYHVRGVFYGWNPT
HGHFLPRPPSYLPVEDVNHSDCWLHVRLYYCDVLVKELTTRTAEGCRIASRAEPADSERL
YGPSCMEQIEFPPPRALGGSSRVAGVTEVLERLLPHLERGVLLWVAPEGVFMKRQCQGRV
YWNGPLAPHRDWPNKLEREKTYKLLDTQQFLQQLRRYLSQGQPAPQYQIHLCFGEEYPTS
AGHHFQKLIMAHVEPVFARELFHHAQRIGPTLLRNCPQPCAPGAPGHIVHVLQQLCQP
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccggggtcgcccatgcggctcaaggagtggctgatcgcccagatcgacagc
ggccgctacccggggctgcgctgggaggacggccgcaggacgctgttccgcatcccctgg
aagcacgcggccaagcaggactaccggcagcagcaggacgcggcgctcttcagggcttgg
gcggtgtacaaggggaagtaccacgagggcacggacaaggccgacccgtccacctggaag
acgcggctccgctgcgcgctcaacaagagcaccgacttccaggaggtgcccgagcggagc
cagctcgacatctccgagccctacaaggtgtaccagatcgtctccgacggcgcccgcgac
gcagagaacgatggtggcccgcagcccccagccggcgaggacccgcagggccgtgccgca
gggagcccggccgaggagggcgtgcggggcgccggggggtccgtgctccccttgctctct
gcccacccagctgagagagggtaccacgtgcggggagtcttctacggctggaacccgacc
cacggccacttcctccccaggcccccgtcctacctccccgtcgaggacgtcaaccactca
gactgctggctccacgtccgcctctactactgcgacgtgctggtgaaggagctcaccacc
cgcacggccgagggctgccgcatcgcctcccgcgccgagccggccgacagcgagcgcctc
tacggcccctcgtgcatggagcagatcgagttccccccgccgcgggcgctcggcggcagc
agccgggtggccggcgtgaccgaggtgctggagcggctcctgccccacctggagcgcggg
gtcctcctgtgggtggcccccgagggggtcttcatgaagcgccagtgccagggcagggtg
tactggaacgggccgctggccccgcaccgggactggcccaacaagctggagcgggagaag
acctacaagctgctggacacgcagcagttcctgcagcagctgcggaggtacctgagccag
gggcagccggcgccgcagtaccagatccacctgtgcttcggcgaggagtaccccaccagc
gccggccaccacttccagaagctcatcatggcccacgtggagccggtgttcgcacgggag
ctcttccatcacgcccagcgcatcggccccacgctgctgcgcaactgcccccagccctgt
gcccccggcgctcccggccacatcgtccacgtcctccagcagctctgccagccctga
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