Oxyura jamaicensis (ruddy duck): 118176730
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Entry
118176730 CDS
T11549
Symbol
SRSF6
Name
(RefSeq) serine/arginine-rich splicing factor 6
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja03040
Spliceosome
oja05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118176730 (SRSF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118176730 (SRSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oja03041
]
118176730 (SRSF6)
Spliceosome [BR:
oja03041
]
Common components
Common spliceosomal components
SR proteins
118176730 (SRSF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
118176730
NCBI-ProteinID:
XP_035199807
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All DBs
Position
20:complement(join(179557..179920,180031..180120,180479..180687,180914..181041,182437..182585,182979..183085))
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AA seq
348 aa
AA seq
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MPRVYIGRLSYHVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDL
CGERVIVEHARGPRRDRDGYSYSSRSGGGGGYSSRRQSGRDKYGPPVRTEYRLIVENLSS
RCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRKIRLV
EDKPRSSHRRSYSGSRSRSRSRRRSRSRSRRSRSSRSRSRSVSKSRSRSKSRSRSKDRSR
SRSKSRKSRSKSKSKPKSDRGSRSHSRSKEKSEKSRSRSRSRSRSPKENGKGDAKSKSKS
RSRSRSNSPQQQPSTKARSESPPKRAASRSRSRSRSKSRSRSRSSSRD
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcgtttacatcggccgcctgagctaccacgtccgggagaaggacatccagcgc
ttcttcagcggctatggccgcctgctcgaggtcgacctcaaaaacggttacggcttcgtg
gagtttgaggactcccgagacgccgatgatgctgtttacgagctgaacggcaaggatctg
tgcggggagcgcgtgatcgtggagcacgcccgcggcccccgccgcgacagggatggatac
agctacagtagtcgcagtgggggtggtggcggatatagcagtcggagacaatctggaaga
gataaatatggaccgcctgttcgtacagagtacagactgattgttgaaaacctttccagt
cgctgtagttggcaggatttgaaagatttcatgaggcaagctggggaggtaacctatgca
gatgctcacaaggaacggacaaatgaaggagtaattgagttccgatcatactccgacatg
aagcgtgccctggacaaactggatggcacagagataaatggaaggaaaatcaggctggtt
gaagacaagccacggtcaagccataggcgatcttactctggcagcaggtcaaggtcacga
tctagaagacggtctagaagcagaagtcgtagaagtaggagcagccgcagcaggtcccgt
agtgtctctaaaagtcgttccagatctaaatccaggtcacgaagcaaagaccgctcacgt
tccagatctaaaagcaggaagtctagatcgaagagcaaatcgaaacccaagtctgacagg
ggttcacgctctcacagcagatccaaggagaagtctgagaagtctcggtccaggtccagg
tccaggtctcgatctcccaaagaaaatggtaaaggagatgctaagtctaaatccaagtca
aggagtaggtctcgttccaattctccacagcagcagccatctaccaaggctcgttcagag
tcaccacccaaaagagctgcatcgaggtcccgttccagatctcgttcaaagtctcgctca
agatcaagatctagttcaagagattaa
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