KEGG   Oxyura jamaicensis (ruddy duck): 118177193
Entry
118177193         CDS       T11549                                 
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
  KO
K18655  ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja03013  Nucleocytoplasmic transport
oja03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:oja00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    118177193
   03015 mRNA surveillance pathway
    118177193
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oja03019]
    118177193
Enzymes [BR:oja01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     118177193
Messenger RNA biogenesis [BR:oja03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     118177193
SSDB
Motif
Pfam: DEAD Helicase_C Cas3-like_C_2
Other DBs
NCBI-GeneID: 118177193
NCBI-ProteinID: XP_035200571
LinkDB
Position
21:join(6411522..6411578,6412082..6412130,6412531..6412587,6413016..6413151,6415492..6415584,6416165..6416267,6417013..6417127,6417657..6417834,6418285..6418522,6419522..6419684,6420272..6420463,6421022..6421083)
AA seq 480 aa
MATDSWALAVDEQEAAAESLSSLHLKEDKAKPDSNGAVVVKADDNVEKTEDEEKEDRATQ
SLLNKLIRSNLVDTTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQ
ENALPMMLAEPPQNMIAQSQSGTGKTAAFVLAMLSRIEPANKYPQCLCLSPTYELALQTG
KVIEQMGKFYPELKLAYAVRGNKLERGHKISEQIVIGTPGTLLDWCSKLKFIDPKKIKVF
VLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKMVPDPNIIKLKR
EEETLDTIKQYYVLCNNRDEKFQALCNIYGAITIAQAMIFCHTRKTASWLAAELSKEGHQ
VALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPD
NETYLHRIGRTGRFGKRGLAINMVDSKHSMNILKRIQEHFNKKINKLDTDDLDEIEKITN
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggccaccgactcctgggccctggccgtggatgaacaggaggcggcggcggaatcgctc
agcagtctgcacctgaaggaggacaaagccaagccggactccaacggtgctgtcgtcgtc
aaggcagacgacaatgtggagaagacggaggatgaggagaaagaggacagagccacccag
tccctgctcaacaagctcatccgcagcaacctggtggacaccaccaaccaggtagaggtg
ctgcagagggaccccaactctcccctctactccgtcaagtccttcgaggaactgcgcctg
aaaccgcagctcctgcaaggagtttatgccatgggcttcaacagaccatcaaaaatccaa
gagaacgccctgcccatgatgcttgccgaacccccacaaaacatgatcgcgcagtctcag
tctggtactggcaagacggctgccttcgtcctcgccatgctcagccgcatcgaacccgcg
aacaagtacccacagtgtttgtgcctttccccaacatacgagctggcacttcaaacggga
aaagtgatcgaacagatgggaaagttctacccagagctgaagcttgcgtatgctgtgcga
ggcaacaaattggagagaggtcacaagatctctgagcagattgtaatcggcacgcctggc
actttgctggactggtgctccaagctgaaattcatagaccccaagaaaatcaaagtgttc
gtcttagacgaggctgatgtgatgatagcaacccagggccatcaggatcagagcattcgc
attcagaggatgctccccaggaactgccagatgcttctgttctcagccacttttgaggat
tctgtgtggaagtttgctcaaaagatggttcctgacccaaacattatcaaactgaagcga
gaagaggagaccctggacactattaagcagtactatgtgctgtgcaataacagagatgag
aagttccaggctctctgtaatatctatggcgctatcaccattgcgcaggccatgatcttc
tgccatactcggaagacggccagctggctggcggcagagctctcgaaggaaggccaccag
gtggcattgctcagtggagaaatgatggtggagcagcgagccgccgtcatagagcgcttc
cgagagggcaaagagaaggtgctggtgaccacgaacgtctgtgccagagggatcgatgta
gagcaggtctctgttgttatcaattttgaccttcctgtggataaagatggaaatcctgac
aacgagacctacctgcaccggatcgggcgcacgggtcgctttggcaaacgaggacttgct
atcaacatggtggatagcaaacacagcatgaatattctcaaaagaatccaggaacacttc
aacaaaaagataaacaaattggacactgatgacctggatgaaatcgagaagataactaac
tga

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