Oxyura jamaicensis (ruddy duck): 118177210
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Entry
118177210 CDS
T11549
Symbol
PRDM16
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16 isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
oja
Oxyura jamaicensis (ruddy duck)
Pathway
oja00310
Lysine degradation
oja01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118177210 (PRDM16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oja03000
]
118177210 (PRDM16)
03036 Chromosome and associated proteins [BR:
oja03036
]
118177210 (PRDM16)
Enzymes [BR:
oja01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
118177210 (PRDM16)
Transcription factors [BR:
oja03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
118177210 (PRDM16)
Chromosome and associated proteins [BR:
oja03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
118177210 (PRDM16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_jaz
SET
zf-C2H2_6
zf-C2H2_11
C2CH-3rd_BIRD-IDD
zf-H2C2_5
Zap1_zf1
DUF7128
zf-BED
zf-met
C2CH-4th_BIRD-IDD
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
118177210
NCBI-ProteinID:
XP_035200597
LinkDB
All DBs
Position
21:complement(1313295..1619578)
Genome browser
AA seq
1195 aa
AA seq
DB search
MTLTQYNVLASNSLPFHPYVALNVEQPVWIFSPQFHLSSVGDSEIVNNMYETDPDLLAGE
SAEEETEDSIMSPIPVGPPSPFPTSEDFTPKEGSPYEAPVYIPDDIPIPPDFELRESSIP
GAGLGIWAKKKIEAGERFGPYMTVQRSTLKETNFGWEQILTDPEVTSQEGNIKKIADDLG
NEKFCIDASQSGAGNWLKYIRVACSCDEQNLAVCHINDQIYYKVIKEIEPGEELLVYLKE
GGYSLGNMAPSMEEEHTFRCEDCDELFQSKLDLRRHKKYACNSVSSLYETLNDEIKQEGL
GDGQVYECKDCERMFPNKYSLEQHMVIHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGK
RFECENCVKVFTDPSNLQRHIRSQHVGARAHACPDCGKTFATSSGLKQHKHIHSTVKPFI
CEVCHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHYNPGG
IFAPGLPLTPTSMMDKSKPSPNLNHASLGFNDYFPSRPHPGGLPFSPAPPAFPALTPGFP
GIFPPSLYPRPPLLPPTQLLKSPLNHTQDAKLPSPLGNPALPLISAVSNSNQATSGEEKC
ESSLENSYLEKLKARNSDMSDGSDFEDVNTTTGTDLDTTTGTGSDLDSDAESDRDKTKDK
SKQIESKPDFVSSSVSASSTNNTSEIPLFYSQHSFFPPPEEHLLPTTGAANDSIKAIASI
AEKYFGPGFMGMQEKKMGSLPYHSMFPFQFLPNFPHSLYPFTERTLNHNLLVKAEPKSPR
DLHKVGSTSSESPFDLTTKPKEIKPILPPPKVLPAPSSGEEQPLDLSIGNRIRASQNGGR
EPRKNHIYGERKLMASEVLPKISQSQLPQQPSLHYAKPSPFFMDPIYSRVEKRKVTDPVG
ALKEKYLRPSPLLFHPQMSAIETMTEKLESFAAMKADSGTSLQPLPHHPFNFRSPPPTLS
DPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRN
IHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENVPVSQHSGVITNHLGTSASSPNSESD
NHALLDEKEDSYFSEIRNFIANSEMNQASTLSDKRPEIQDIDGNSQCHGLSNEKTEEVDD
EDEELEEEDDDSLTGKSQDETVSPTAEPRGAYEDEEDEEPTSLTMSFDHTRRLMQ
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgacccagtataacgtgctagcctccaactcgcttcccttccatccttacgta
gctctaaacgttgagcaaccagtgtggatattctctcctcagttccacctgagctctgta
ggtgacagcgagattgtaaataatatgtacgagaccgaccctgatctccttgctggcgaa
agtgcagaggaggaaacagaggacagtattatgtcccccatccctgtcggacctccatca
ccctttcccaccagcgaggacttcactcccaaggagggctcaccttatgaagctcccgtc
tacattcctgatgacattccaatcccaccagattttgaactcagagaatcttcgatccca
ggggcagggctagggatttgggccaaaaagaagatcgaagctggggaaagatttggacct
tatatgacagtacaaaggagcacattaaaggaaacaaactttggatgggagcaaatactg
actgatcccgaggtgacctcccaagagggcaacataaaaaagatcgctgatgacctggga
aatgagaaattctgcattgatgctagccagagcggagctgggaactggctgaaatacatc
cgcgtggcctgttcctgtgacgagcagaacctcgccgtgtgtcacattaacgaccagatc
tattataaagttattaaagaaattgagccaggagaagagctcttggtgtatttgaaggaa
ggtggttattcacttgggaacatggcgcccagcatggaagaggagcacacgtttcgctgc
gaggactgtgacgagctttttcagtcaaagctggacctgcggcgacacaagaagtacgcc
tgcaactccgtcagctccctctacgagactctgaacgacgagatcaagcaggagggcctt
ggcgatgggcaggtctacgagtgcaaagactgcgagaggatgttccccaacaaatacagc
ctggagcagcacatggtgatccacactgaggagcgggagtacaagtgcgaccagtgcccg
aaggccttcaactggaaatccaacctgattcgtcaccagatgtctcacgacagtgggaag
cggtttgaatgtgaaaactgtgtcaaggtgtttaccgacccaagcaacctccagcggcac
atccgttcccagcacgttggcgcgcgagcccatgcctgcccggactgcggcaaaaccttt
gccacctcgtctggcctcaaacaacacaagcacattcacagtactgtcaaacctttcata
tgtgaggtctgtcacaaatcctacacgcagttctccaacctctgccgtcacaagcggatg
cacgcggactgtcgcacccagatcaaatgcaaggactgtggccaaatgttcagcactacc
tcctctctcaacaaacaccggcgcttctgcgagggcaagaaccattacaaccctggggga
atctttgcaccaggcctccccttaacacccacttccatgatggacaaatccaagccctct
cccaacctcaaccacgccagcctgggatttaatgattattttccatcccgtccccaccca
gggggtcttccattctcacctgcccccccagcatttcctgccctcactccaggattccca
gggattttcccaccatctctgtaccccaggccccccttgttaccacccacacaactgctc
aaaagtcccctcaaccacactcaagacgcaaagcttccgagcccccttgggaacccagca
cttcctctgatttctgcagtaagcaacagcaaccaggccacttcaggagaggagaaatgt
gaaagcagcctggaaaactcctacctggagaagctaaaagccaggaacagtgacatgtcc
gacggcagtgacttcgaggatgtcaatacaaccacgggcacagatctggataccaccact
ggcaccggctctgacctggacagtgacgcagagagcgacagggacaaaacgaaagataag
agcaaacaaattgagagcaaaccagactttgtcagcagctctgtgtctgcaagctccacc
aacaataccagtgagatccctctcttctattctcagcattccttctttcctcccccagaa
gagcacctgctacccaccacaggagcagccaatgactctattaaagccatcgcctccatt
gcagagaaatattttgggcctggctttatggggatgcaggagaaaaagatgggttcactc
ccgtatcattccatgtttccatttcagttcctccccaatttcccccattccctctaccct
ttcacggagcggaccctcaatcacaacttgctggtcaaggcagaaccaaagtcaccccgg
gacctccacaaggtaggcagcaccagctcagagtcgcccttcgatctcaccacaaagcca
aaagagataaagccaatcctgccaccacctaaggtcctgccagccccatcctcaggggaa
gaacagccactggatctgagcattggcaaccgcatccgagccagtcaaaatggaggaaga
gagccacgcaaaaaccacatttatggggagaggaaactaatggcaagtgaagtcttaccc
aagatttcccagtctcagctgcctcagcaaccatccctgcattatgctaagccatcaccc
tttttcatggaccccatatacagcagggtggagaagcggaaggtgacagaccctgtgggt
gccctaaaggagaagtacctgcgaccctccccgctgctattccacccccagatgtcagcc
atagaaacaatgacagagaaactggagagctttgcagccatgaaggcagactctggcact
tccctgcagccccttccacatcaccctttcaacttccgatctccaccacccacgctatcc
gaccccatcctgcgcaagggcaaggagcgttacacctgcaggtactgtggtaagatcttc
ccacgctcagcaaatctgacaagacatctgcggacacacactggagaacagccctacagg
tgtaaatactgtgacaggtcattcagcatttcctccaacctccagcggcacgttcgaaac
atccataacaaggagaagccattcaaatgccacctgtgtaaccggtgcttcgggcagcag
accaacttggaccgacatcttaagaaacacgaacacgagaacgttccagtgagccagcac
tctggagtcattacaaaccaccttgggaccagtgcctcttccccaaactcggagtcagac
aaccatgcacttttagatgaaaaagaggattcgtatttctctgaaatcagaaattttatt
gcaaatagtgaaatgaatcaagcatcaaccttatcagataaaaggccagaaatccaggat
attgatggcaattcccagtgtcatggattatcaaatgagaaaacagaagaagtggatgat
gaagatgaagaactggaagaggaagacgatgacagcctgacagggaagtcacaggatgaa
acagtatcacccaccgcagagccccgaggagcatacgaggatgaagaagatgaagagccc
acatctctcaccatgagctttgaccacacccgaaggcttatgcaatga
DBGET
integrated database retrieval system
