Oxyura jamaicensis (ruddy duck): 118177291
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Entry
118177291 CDS
T11549
Symbol
GABRD
Name
(RefSeq) gamma-aminobutyric acid receptor subunit delta isoform X1
KO
K05184
gamma-aminobutyric acid receptor subunit delta
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja04080
Neuroactive ligand-receptor interaction
oja04082
Neuroactive ligand signaling
oja04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118177291 (GABRD)
04082 Neuroactive ligand signaling
118177291 (GABRD)
04519 Cadherin signaling
118177291 (GABRD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oja04040
]
118177291 (GABRD)
Ion channels [BR:
oja04040
]
Ligand-gated channels
GABA-A
118177291 (GABRD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF8133
Motif
Other DBs
NCBI-GeneID:
118177291
NCBI-ProteinID:
XP_035200790
LinkDB
All DBs
Position
21:complement(join(2334165..2334464,2335249..2335460,2336050..2336205,2337119..2337256,2338985..2339067,2339595..2339815,2340052..2340119,2340502..2340614,2348744..2348811))
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AA seq
452 aa
AA seq
DB search
MEFLTWLFPALVLLCTQQHRCIRAMTDIGDYIGSNIEISWLPNLDDLMKGYARNFRPGIG
GPPVNVALAIEVASIDHISEVNMEYTMTVFLHQSWRDERLSYNHTNETLGLDSRFVDKLW
LPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDMDLSKYPMDEQECML
DLESYGYSSEDIVYHWSENQDEIHGLDKLQLAQFTITNYQFTTEMMNFKSAGQFPRLSLH
FHLRRNRGVYIIQSYVPSILLVAMSWVSFWISQSAVPARVSLGITTVLTMTTLMVSARSS
LPRASAIKALDVYFWICYVFVFAALVEYAFAHFNADYMKKQKNKLKARRQSAEVNVKNAI
VLFSLSIAGVHQELAISNRHHRIPRSLPGSYGTIEIETGETKLRQEMKLDRKSGLKSLFK
PIDADTIDIYARAVFPAAFAAVNVIYWVAYTM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggaatttctcacctggcttttccccgccttggtcctgctgtgcacccagcagcacagg
tgcatcagagctatgactgacattggagattacataggctccaacatcgaaatatcctgg
ttacccaacctagatgacttgatgaaagggtatgcacggaatttcaggcctgggattgga
ggtcctcctgttaatgttgctcttgcaattgaagtagccagcatcgaccacatctcagag
gtgaacatggaatataccatgacggtatttctgcaccagagctggcgagatgagcgcctg
tcttacaaccacaccaatgaaactctgggcttagacagccggtttgtggacaagctctgg
ctgccagacactttcatagtaaatgccaagtctgcctggttccatgatgtgactgtggaa
aacaaacttatcaggctccagccagatggggtcattttatatagcataaggattacctca
acggtggcctgtgacatggacctttccaagtacccaatggatgagcaagaatgcatgttg
gatttggagagctatggctattcttcagaggacattgtctaccactggtcagaaaaccag
gatgaaatccatgggctggataagctgcagcttgctcaattcacaatcaccaattaccag
ttcacaacagaaatgatgaacttcaaatctgcaggtcagtttcccaggctcagtctccac
ttccaccttcggcgaaatcgaggagtttacatcattcagtcttatgttccttctatctta
ctagtggccatgtcgtgggtatccttctggatcagtcagtcagctgtgcctgccagagtg
tcattaggtataactactgttcttactatgactacgctgatggtcagtgcccggtcttcg
cttccacgagcatcggccatcaaggcacttgatgtttacttctggatatgctacgtgttt
gtcttcgctgcacttgtagaatatgcatttgcacatttcaatgctgactacatgaaaaag
caaaagaacaagctcaaggcaagaaggcagagtgcagaggtaaacgtgaagaatgccatt
gttctgttttccctttccatagctggtgtgcaccaggaactggccatttccaacaggcac
caccgcattcccagaagtctgcctggatcatacggcacaatagaaatagaaactggagag
acaaaactgcggcaagaaatgaaactggatagaaagagtggtttgaagtccctctttaag
cccattgatgctgataccattgacatatatgccagagcagtgtttccagcagccttcgca
gcagtcaatgttatatactgggttgcctacacgatgtaa
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