Oxyura jamaicensis (ruddy duck): 118177616
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Entry
118177616 CDS
T11549
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja03013
Nucleocytoplasmic transport
oja03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118177616 (SRRM1)
03015 mRNA surveillance pathway
118177616 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oja03019
]
118177616 (SRRM1)
03041 Spliceosome [BR:
oja03041
]
118177616 (SRRM1)
Messenger RNA biogenesis [BR:
oja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118177616 (SRRM1)
Spliceosome [BR:
oja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
118177616 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
118177616
NCBI-ProteinID:
XP_035201363
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All DBs
Position
23:6707930..6731047
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AA seq
906 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
TAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPS
PRRRSSPVRRERKRSHSRSPHHRTKSRSTTPAPEKKEATPEPEPSVKPKETVVQEATSNS
DIPKAPKSEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPR
RRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRMPLPPRHRRSRSPVRRRRRSSASLSGSS
SSSSSSRSRSPPKKPPKRTVSSPPRKTRRMSPSASPPRRRHRPSPPASPPPKPRRSPTPQ
QSNRSRKSRGSVSPGRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKES
SPRMQMEKRWQSPVMKSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRR
RSPSPRRYSPPIQRRYSPSPPPKRRTASPPPSKRRASPSPQSKRRVSHSPPPKQRSSPAA
KRRSPSISSKHRKGSPPCRSNREARSPPQNKRHSPSPRPRASHTSASPPPLRRGASASPQ
RRQSPSPSTRPIRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSP
ARSRSPSANWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKK
EKAAAATAAAAVAAADTTSVQEEQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKA
QVSPPS
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggtttcttccgcggaacaagtgcagaacaggacaatcgcttcagcaacaaa
cagaagaaactgttgaagcagttgaaatttgcagaatgcttagaaaagaaggtggacatg
agcaaagtaaatctggaagtaatcaaaccatggataacaaaacgagtaacagaaatcctt
ggatttgaagatgatgtagtaattgaatttatattcaaccagttggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactggttttttgaatgggaaaaatgctagggag
ttcatgggagaactgtggccactgctgttaagtgcacaggaaaacattgctggtattcca
actgcatttctggaattgaagaaagaagaaattaaacagcgacagatagagcaagagaaa
ctggcttctatgaagaaacaagatgaagacaaggagaagagggacaaggaagacaaagac
aacagagaaaagagagacagatccaggagtccaagaagacgcaaatcgaggtctccttcc
cctagaaggaggtcatcacctgtcagaagagagcggaaacgcagccattctcgctcccct
catcacagaaccaagagccgtagtactactcctgcaccagaaaagaaggaggcaactcct
gagccagaaccctctgtgaaaccaaaggagactgttgttcaagaggcaacttcaaacagt
gatatcccaaaagctcccaaatctgaacctcctgtgccagagactaaggaaacttcacca
gaacgtaattcaaagaaggagagagagaaggagaaagagaagactcgtcaaagatcacca
actcggtccaagtcaaggtcaaggtctcgatcccgttctccatctcattctcgaccaaga
aggcgtcatagatcacggtcaaggtcttactctcctagaaggcgaccaagcccaagacga
cgaccatctccaaggaggaggagtcctccgaggcgaatgcctctcccacccagacacaga
agaagcagatcgccagtgaggaggagaagacggtcatcagcatctttatctggtagtagc
tcctcttcctcctcctcacgttcccgatcaccaccaaagaaaccacctaaaagaactgta
tccagtcctcctcgtaaaacacgtaggatgtctccttctgcaagccctcctaggcggagg
cacagaccatctccaccagcaagtccacctccaaaaccacgtagatctccaacgcctcag
cagtcaaatcgttcaagaaaaagccgtggctctgtttcacctggcagagcgtcagcaccc
aaacataagagtactgaaaaaagagaatctccttcaccagcaccaaaaccaaggaaagct
gagctgtctgaatcggaagaagataaaggaggtaaaatggctgcagcagattctgtgcaa
cagaggcgtcaatacagaaggcaaaatcaacagtcttcatctgattctggctcctcatct
tcatctgaagaggaaagacctaaaagatccaatgtgaagaatggggaagttggtagacgc
cgacgccattcacattcacgcagtccatcaccatctccacgaaaacgacagaaggaatcc
tcccctcggatgcagatggaaaagaggtggcaatcaccagtgatgaaaagtaggaggagg
agaagtccatcacctccaccagccaggcgacggcgctctccatcgcctgcccctcctcct
aggcggcgacggtcaccttcattgcctcgccgaaggtctccatcaccacccccacgtaga
cgctcaccttcaccaaggagatactctccaccaatacagagacgatactctccttctcca
cctcctaagagaagaacagcttctcctcctccctctaaacgacgagcatcaccgtctcca
cagtcaaaacgcagagtctcccattcaccaccaccaaaacaaaggagctctccagctgct
aaaaggcgttcaccttcaatatcttccaagcacaggaagggttctcctccctgtaggtct
aatcgcgaagcacgttctccaccacaaaacaaaaggcattcaccttcaccaagacctaga
gcttctcatacctctgcaagcccaccaccactgcgaaggggagcttcagcttcaccgcag
agaagacagtctccatctccaagcactagacccatcaggagggtgtcaagaacaccagaa
cctaagaagacaaaggcttccacgccaagtccacgatctgcaagacgggtgtcttcatcg
cgatctgcatcaggatcacctgaaccagctccaaaaaaacatcaaggacctccatctcct
gctcgatctcgttccccttctgcaaactggtcacctgcaaaaaaggctaaaagtccaact
cagagcccatcacctgcaaggaattcagaccaagaagggggtggaaagaagaagaagaaa
aagaaggataagaagcataaaaaggataagaagcacaagaaacacaaaaaacataagaag
gaaaaagcagcagcagctacagctgctgctgctgtggctgcagcagataccacctcagtg
caggaagaacaggaagcagagacagaacccaaaaaggagacagaaagtgaaccagaagac
aacctcgatgacctagaaaaacacctgagagagaaagcactgaggtcaatgaggaaggcg
caagtgtcaccaccatcttag
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