KEGG   Oxyura jamaicensis (ruddy duck): 118177631
Entry
118177631         CDS       T11549                                 
Symbol
TAF12
Name
(RefSeq) transcription initiation factor TFIID subunit 12
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:oja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    118177631 (TAF12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oja03021]
    118177631 (TAF12)
   03036 Chromosome and associated proteins [BR:oja03036]
    118177631 (TAF12)
Transcription machinery [BR:oja03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     118177631 (TAF12)
   Coactivators
    SAGA/TFTC/STAGA complex
     118177631 (TAF12)
Chromosome and associated proteins [BR:oja03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     118177631 (TAF12)
    STAGA complex
     118177631 (TAF12)
    TFTC complex
     118177631 (TAF12)
    SAGA complex
     118177631 (TAF12)
    SLIK complex
     118177631 (TAF12)
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa CENP-T_C TAF4 TAF10 DCAF1_4th DUF5827
Other DBs
NCBI-GeneID: 118177631
NCBI-ProteinID: XP_035201407
LinkDB
Position
23:complement(join(2535188..2535223,2536491..2536579,2536991..2537105,2537400..2537477,2538494..2538661))
AA seq 161 aa
MNQFGPSTLINLSNFSSIKPEPASTPPQSSMANSTTVAKMPGTPSGGGRLSPESNQVLTK
KKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSNTLEVKDVQLHL
ERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIRKTTKK
NT seq 486 nt   +upstreamnt  +downstreamnt
atgaaccagtttggcccttcgaccctcatcaacctctccaacttctcctcgatcaagccc
gaaccggccagcacccccccgcagagctccatggccaacagcaccacggtggcgaagatg
ccggggacgcccagcggaggagggcggctcagtcccgagagcaaccaggtcctaaccaag
aagaagctgcaggacctggtgcgtgaggtggacccaaacgagcagctggatgaagacgtg
gaggaaatgctgctgcagatcgccgacgatttcatagagagcgtggtgacggctgcctgc
cagctggcgcggcatcgcaagtccaacaccctggaggtgaaggacgtccagttgcacctc
gagcgtcagtggaacatgtggatcccaggctttggttctgaagaaatcagaccctacaaa
aaagcctgcactacagaagctcacaaacagagaatggcactgatccgcaaaactaccaag
aaataa

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