Oxyura jamaicensis (ruddy duck): 118178092
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Entry
118178092 CDS
T11549
Symbol
TRIM29
Name
(RefSeq) tripartite motif-containing protein 29 isoform X1
KO
K12010
tripartite motif-containing protein 29
Organism
oja Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oja04121
]
118178092 (TRIM29)
Ubiquitin system [BR:
oja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118178092 (TRIM29)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRIM_CC
zf-B_box
ANCHR-like_BBOX
Apolipoprotein
KIF21A_4th
C5HCH
Motif
Other DBs
NCBI-GeneID:
118178092
NCBI-ProteinID:
XP_035202214
LinkDB
All DBs
Position
24:join(4745560..4746417,4753793..4753888,4755160..4755393,4755792..4755990,4759561..4759644,4762670..4762729,4763935..4764036,4765143..4765219,4768224..4768286)
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AA seq
590 aa
AA seq
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METGSAARTNGTTGKPEDVKSPSAPKKDEEVKKTTNPGGGEKEPMKGTGSSLETGQIKSS
LFSGSDWKRPIIQFVESSDEKRSTYFSMDSADSKKMQYGSGQIGDMRRPPLSFADKGDLR
KSLFSLDSKKSFLPNEGEGRKPLFSGGQMGDMKKSSLPLVETGDLRRSTFNKVPDRAAGS
RPRVKLEDVLCDSCIDNKQKAVKSCLVCQASFCELHLKPHLEGAAFRDHQLLDPIRDFEA
RKCPVHGKTMELFCQTDQMCICYLCMFQEHKNHSTVTVEIEKAGKEAELSLQKEQLQLKI
IEVEDEMDKWQKERDRIKNYTTNEKATVDQHFKELIRDLERQRDEVKAALDQREKIASEN
VKEIVDELEERAKLLREDKENREQIHQISDSVLFLQEFGALMRNYVPPPSLPTYSVLLEG
ESMSPSMGLLRDDLLNVCMRHVEKICKADLGRNFIERNHMENGDHRFMMNNYEWNQPDNL
KRFSMFLSPKASFNPRSWEFSSFQATEETLVGNGTKLPFQFSSVGQNPPGDFSKQSDGSL
FTKTAYPSIVRHQSAKVTPQTWKSSKQSVLSHYRPFYVNKGNGATSNEAP
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggggagcgcagcaaggacaaatggtaccaccggcaagccagaggatgtgaag
agcccgtccgcccccaaaaaagatgaagaagtgaagaagaccacgaaccctggaggaggg
gagaaggagccaatgaagggcactggttcttctctggagacggggcaaatcaagagctcc
ctcttctctgggagtgactggaagaggcccatcattcagtttgtggagtcgtctgacgag
aagagatcgacctacttcagcatggactcggcagactcaaagaagatgcagtatggcagt
ggacagataggagacatgaggagaccccccctctcctttgcagataaaggcgacctcagg
aagtccctcttctccttggattccaaaaagagcttcctgcctaacgaaggggaagggagg
aagccgctcttctccggcgggcagatgggggacatgaagaagtcttccctgcctctggtg
gagaccggggacctgagaagatccaccttcaacaaggtgcccgacagagcagccgggtcg
cggcccagggtgaagctggaggatgtgctgtgtgattcctgcatcgacaacaagcaaaag
gccgtgaagtcctgcttggtgtgccaggcttccttctgcgagctgcacctcaagccccac
ctggagggagcagctttccgggaccaccagctcctggaccccatcagggactttgaagca
agaaaatgccctgtgcatgggaagaccatggagctgttctgtcagacagaccagatgtgc
atctgctacctctgcatgttccaggagcacaagaaccacagcacggtgacggtggagatc
gagaaagcgggtaaagaggctgagctttcactgcagaaagagcaactgcagctgaagatc
atcgaggtagaagatgaaatggacaagtggcagaaggagagggaccgcatcaagaactac
accaccaacgagaaagccacagtagaccagcatttcaaagagctgatccgtgacctggag
aggcagagggatgaagtgaaggctgccctggaccagagggaaaagattgcatcagagaac
gtgaaggagatagtggatgagctggaagagagggcgaagctgctgcgggaggacaaggag
aacagggagcagatccaccagatcagtgactccgtgctctttctccaggagtttggggct
ttgatgaggaactacgtcccccctccatccctcccgacatacagcgtgctgcttgaaggg
gagagcatgagcccatcaatggggctgctcagagatgacctcctcaatgtctgcatgagg
cacgtggagaagatctgcaaggcagacctgggccgcaacttcatcgagaggaaccacatg
gagaatggcgaccaccggttcatgatgaacaactacgagtggaaccagcccgataacttg
aagagattttccatgttcctgtctcccaaagccagtttcaacccacgatcatgggaattt
tcctccttccaagcgactgaggaaacacttgtaggcaatggcactaagctgccttttcag
ttctcctcggtgggacagaatccgcccggtgacttcagcaaacagtctgatgggagcctc
ttcactaagaccgcttatccctcaatagtgagacatcagtctgcaaaggtgacgccacag
acgtggaaatcctccaagcagtctgtattgtcacattaccgccccttttacgtcaacaaa
ggcaatggagccacctccaacgaggcaccttga
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